Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Microbotryum_20saponariae_20[genbank_20GCA_5F900015475.1_202016-12- 23] 72 sequences; 28,653,577 total letters Query= NC_024625.1 Length=151109 Score E Sequences producing significant alignments: (Bits) Value seq41 333 3e-86 seq55 138 1e-27 seq36 136 4e-27 seq20 134 1e-26 seq45 89.7 5e-13 >seq41 Length=447122 Score = 333 bits (368), Expect = 3e-86 Identities = 840/1255 (67%), Gaps = 33/1255 (3%) Strand=Plus/Plus Query 148532 CGCCAGTTCGCAGCTCGCCTCGAGCGCGCCGTAGTAAATCGTCTCGGCAATTTGCCTGTT 148591 ||||| ||||| || ||||| |||| ||| ||| || |||||| || ||| |||| Sbjct 423091 CGCCATGTCGCACGACGACTCGATCGCGGCGTGGTAGATGGTCTCGAAGATCTGCTTGTT 423150 Query 148592 GAGCA-GCGCCGCCGACTCGCTT---TCGTACGGCATACGCAGCCGCACAAACGCGTCGG 148647 |||| |||| | |||| | ||| ||||||| || | || |||||||||| Sbjct 423151 GAGCTTGCGC----GCCTCGGGTGAATCGAACGGCATCGCCAACGCCATGAACGCGTCGG 423206 Query 148648 CAAGGCCCTGTACGCCCACGCCAATGGGCCGGTGTTTAATGTTGGAGAGGCGCGCGCTCT 148707 | || || || || || | ||| ||||| ||||| | ||||||| |||| ||| Sbjct 423207 CGAGACCTTGCACTCCGATGCCGATGGGGCGGTGGCGGAAGTTGGAGTTCTGCGC-CTCG 423265 Query 148708 C-GAGCGGATAGTGGTTGCGGTCGATGATCTTGT-CAAGATTGCGCACCACCACCTTTGT 148765 || ||||||| |||| ||||||||| || |||| ||| | || ||||| Sbjct 423266 ATGACGGGATAGTAGTTGACGTCGATGATGCGGTTCAAG-TTGAAAGCGACGACCTTGAC 423324 Query 148766 AATTCTGCGCAGCAATTCAAAATCGTACTTGTCATCTACGATGCA--TCGGTTCACGGCG 148823 | | ||| | | ||| |||||| | | | |||| | |||| || ||| Sbjct 423325 GACCTCGTGCAACTTCTTAAAGTCGTACACGCCGTTCTTGATGAAGCTCGG--CAACGCG 423382 Query 148824 ATAGAGGCTAGATTGCACACGGCCGTCTCATCCGGGGCGCTGTACTCTACGATCTCGGCG 148883 || ||||| | ||||| ||||| |||||| || || |||||| | |||||||| | Sbjct 423383 ATCGAGGCCAAGTTGCAGACGGCGCACTCATCGGGCGCCGAGTACTCGATGATCTCGGTG 423442 Query 148884 CACAGATTGCTGCATTTGATCACGCCCACGTTCTTTTGATTGCTCTTGCTGTTGCACGCG 148943 |||| || | |||||| ||| | ||||||||| || || |||| ||| Sbjct 423443 CACAAGTTCGACGACTTGATCGTGCCAAGGTTCTTTTGGTTCGATTTTTTGTTTGCGGCG 423502 Query 148944 TCCTTGTACAGCATGTACGGTCCGCCAGTTTCCACCTGCGTTTCCACTAT---GAACCGA 149000 |||||||| |||||| |||| ||| ||||| ||||| | ||| | || | ||| | Sbjct 423503 TCCTTGTAGAGCATGAACGGGTTGCCGGTTTCGACCTGGGCTTCAAGAATCGCGTACCAA 423562 Query 149001 TGCAGGTCCTGCGCGCGCACTTGCTGCTCGTAGCGACCCTCCTGCTCGTATAAAGTATAC 149060 || | |||||| | | || || | ||| ||||||| |||||| || Sbjct 423563 AGC---TTTTGCGCGGGGATCGTCTTCTTGGCGCGGCCCTCCTTTTCGTATTTCTCGAAC 423619 Query 149061 A-GCCGCTCGAACGCCTCGCCGTAGCAATCGTCGAGACCGGGGCACTTGTGCGGG-CACA 149118 | | ||| |||| | ||||| ||| |||| ||| |||||| ||| ||||| || | Sbjct 423620 AAGGCGCG-GAACTCTTCGCCATAGACTTCGTGGAGGCCGGGGG-CTTCAGCGGGGCAGA 423677 Query 149119 TGAGCGACCACACGCCGTCCGCGTACACGCGCTTCATAAACAGATCGGGCACCCAGAGCG 149178 ||| | |||| ||| | | || | || |||| ||||||||||||||| | |||||||| Sbjct 423678 AGAGGGGCCACTCGCTGGCGGCCTCGACACGCTCCATAAACAGATCGGGAATCCAGAGCG 423737 Query 149179 CGTACATGAGGTCGCGCGCCTTGCAGTCTTCGGCGCCCATGTTGCGGCGCAGGTTGAGCA 149238 | | | ||| || || || | || || ||| ||| ||| |||| || | Sbjct 423738 CAAAGAAGAGATCACGAGCGCGGACCTCCTCCTTGCCGTGGTTCTTGCGAAGGTCCAGGA 423797 Query 149239 CGCTGAATATGTCCGCGTGCCACGGCTCAATGTACACCGCGAGCGCGCCCTTGCGCTTG- 149297 ||| | ||| |||||||| ||||| | ||| | ||||| || || |||||| Sbjct 423798 ACTCGAAGACGTCAGCGTGCCATGGCTCGAGGTAGATCGCGAAGGCTCCGGGACGCTTGT 423857 Query 149298 --CCGCCCTGGTCGACGTGGCGCACCATGTTGTTAAACACTCGAACCATAGGTTCAATGC 149355 || || |||||||||| |||| | ||||||| | || || | ||| || | |||| Sbjct 423858 TGCCACCTTGGTCGACGTAGCGCGCGGTGTTGTTGTAGACACGGAGCATGGGGACGATGC 423917 Query 149356 CACTGGCAGT-GCCGTTAGTAGAGCTAATGCGACTGCCGCGCGCTCGCACTTTGTGCACG 149414 | | | ||| |||||| || | ||| | |||| ||| || | ||||| | | Sbjct 423918 CGTTCG-AGTAGCCGTTCGTGCCGGCGATGTAAGAGCCGGTCGCGCGGATGTTGTGGATG 423976 Query 149415 TTGACGCCGATGCCGCCGCCGTACTTTGAGATGGCCGCGCA-GTCGCCGAGCGTCGAGTA 149473 | | ||||| || ||| || ||| |||||| |||||| ||| |||||| ||| Sbjct 423977 CTCAAACCGATACCACCGGCGGTCTTGGAGATGAGCGCGCACGTCTT-GAGCGTGTCGTA 424035 Query 149474 GATGCCCTCGATGCTGTCGCGCTTCATGGTCAGCAGAAAGCACGAGCACATTTGCGGAAA 149533 |||||| ||||| |||| ||||||||| | ||| || ||||| | | ||||| Sbjct 424036 GATGCCTTCGATCGAGTCGTCCTTCATGGTGACCAGGAAACACGACGAAAGCTGCGGGTG 424095 Query 149534 ACGCGTGCCGGCCGCGAACATGGTGGGGCTGGCGTGTGTAAAATATTTCTGGCTCATCAT 149593 | |||| ||||| ||| | || || |||||| ||||| || || | ||| | Sbjct 424096 AGGCGTTCCGGCGTTGAAGAGCGTCGGCGAGGCGTGGGTAAAGTAGCGCTCGGACATGAG 424155 Query 149594 CTCGTACGACTCGAGCACGCGGTCCATGTCATCGCCATGGATGCCTATGGCGACGCGCAT 149653 | |||||||| | ||||| || ||||| | || |||||||| | |||||||||||| Sbjct 424156 GTTGTACGACTGCAAGACGCGCTCGATGTCGTGACCGTGGATGCCGACGGCGACGCGCAT 424215 Query 149654 CAGCATATGCTGCGGTCGCTCCGCCACTTTGTTTCCAATTTTGAGCAAGTAGCCGTTTTC 149713 ||||| || ||||| || || || || ||| | || ||||||||| | || Sbjct 424216 GAGCATGTGTTGCGGGCGTTCGGCGACCTTGCCGTCGATGCGAAGCAAGTAGGAGCGCTC 424275 Query 149714 TAGTGTCTTGTAGCCAAAGTACTTGTAGTCAAAGTCGCGGCCGTGGTCAATGGCG 149768 || |||||| |||||||||| |||||| | || |||||| ||| | || |||| Sbjct 424276 GAGCGTCTTGAAGCCAAAGTAGTTGTAGCCGAAATCGCGGTCGTAGATAACGGCG 424330 >seq55 Length=539833 Score = 138 bits (152), Expect = 1e-27 Identities = 157/208 (75%), Gaps = 2/208 (1%) Strand=Plus/Minus Query 133455 AAATGTATGGTGGACTCTTTCTGTATATTGTAATCGCCCATCGTG-GACGAGTCCTCGAG 133513 || || | ||| ||||| || || || ||||| ||| ||| ||| | | | |||||||| Sbjct 107510 AAGTGGAGGGTCGACTCCTTTTGGATGTTGTAGTCGGCCAAGGTGCGGCCA-TCCTCGAG 107452 Query 133514 CTGCTTGCCCGCGTAAATGAGCCGCTGCTGGTCGGGAGGGATGCCTTCCTTGTCGGTGAT 133573 ||||||||| ||| | ||||| || |||||||| || ||||||||||||||||| ||| Sbjct 107451 CTGCTTGCCGGCGAAGATGAGACGTTGCTGGTCTGGGGGGATGCCTTCCTTGTCTTGGAT 107392 Query 133574 CTTTTGCTTGAGCTGCTCAACCGTGTCGGTGGGCTCCACGTCGACGGTGACGGTTTTGCC 133633 ||| ||||| | || | |||||||| | ||| || |||| ||||| || ||||| Sbjct 107391 CTTGGTCTTGACGTTGTCGATCGTGTCGGACGACTCGACCTCGAGGGTGATCGTCTTGCC 107332 Query 133634 GGTCAGAGTTTTTACGAAAATCTGCATG 133661 || ||||| || ||||| || ||| || Sbjct 107331 CGTAAGAGTCTTGACGAAGATTTGCCTG 107304 >seq36 Length=1841281 Score = 136 bits (150), Expect = 4e-27 Identities = 150/197 (76%), Gaps = 2/197 (1%) Strand=Plus/Plus Query 133464 GTGGACTCTTTCTGTATATTGTAATCGCCCATCGTG-GACGAGTCCTCGAGCTGCTTGCC 133522 || ||||| || || || |||||||| | | |||| | | | ||||||||||||||||| Sbjct 1559718 GTCGACTCCTTTTGGATGTTGTAATCCGCGAGCGTGCGGCCA-TCCTCGAGCTGCTTGCC 1559776 Query 133523 CGCGTAAATGAGCCGCTGCTGGTCGGGAGGGATGCCTTCCTTGTCGGTGATCTTTTGCTT 133582 || | ||||| || ||||||||||| ||||||||||||||||| |||||| ||| Sbjct 1559777 GGCAAAGATGAGACGTTGCTGGTCGGGGGGGATGCCTTCCTTGTCCTGGATCTTGGTCTT 1559836 Query 133583 GAGCTGCTCAACCGTGTCGGTGGGCTCCACGTCGACGGTGACGGTTTTGCCGGTCAGAGT 133642 || | || | |||||||| | ||| || |||| ||||| ||| ||||| || || || Sbjct 1559837 GACGTTGTCGATCGTGTCGGACGACTCGACCTCGAGGGTGATGGTCTTGCCCGTGAGGGT 1559896 Query 133643 TTTTACGAAAATCTGCA 133659 || ||||| || |||| Sbjct 1559897 CTTGACGAAGATTTGCA 1559913 >seq20 Length=1456699 Score = 134 bits (148), Expect = 1e-26 Identities = 150/198 (76%), Gaps = 2/198 (1%) Strand=Plus/Minus Query 133464 GTGGACTCTTTCTGTATATTGTAATCGCCCATCGTG-GACGAGTCCTCGAGCTGCTTGCC 133522 || ||||| ||||| || |||||||| | | |||| | | | ||||||||||||||||| Sbjct 789129 GTCGACTCCTTCTGAATGTTGTAATCCGCGAGCGTGCGGCCA-TCCTCGAGCTGCTTGCC 789071 Query 133523 CGCGTAAATGAGCCGCTGCTGGTCGGGAGGGATGCCTTCCTTGTCGGTGATCTTTTGCTT 133582 ||| | ||||| || || ||||| || || || || |||||||| |||||| ||| Sbjct 789070 CGCAAAGATGAGACGTTGTTGGTCTGGGGGAATACCCTCCTTGTCTTGGATCTTGGTCTT 789011 Query 133583 GAGCTGCTCAACCGTGTCGGTGGGCTCCACGTCGACGGTGACGGTTTTGCCGGTCAGAGT 133642 || | |||| |||||| | || ||| || |||| ||||| ||| |||||||||| || Sbjct 789010 GACATTGTCAATCGTGTCCGAGGACTCGACCTCGAGGGTGATGGTCTTGCCGGTCAAGGT 788951 Query 133643 TTTTACGAAAATCTGCAT 133660 || ||||| || ||||| Sbjct 788950 CTTGACGAAGATTTGCAT 788933 Score = 129 bits (142), Expect = 6e-25 Identities = 149/198 (75%), Gaps = 2/198 (1%) Strand=Plus/Minus Query 133464 GTGGACTCTTTCTGTATATTGTAATCGCCCATCGTG-GACGAGTCCTCGAGCTGCTTGCC 133522 || ||||| ||||| || |||||||| | | |||| | | | ||||||||||||||||| Sbjct 789585 GTCGACTCCTTCTGAATGTTGTAATCCGCGAGCGTGCGGCCA-TCCTCGAGCTGCTTGCC 789527 Query 133523 CGCGTAAATGAGCCGCTGCTGGTCGGGAGGGATGCCTTCCTTGTCGGTGATCTTTTGCTT 133582 |||| | || | ||||||||||| || || |||||||||||||| ||||| ||| Sbjct 789526 CGCGAAGATCAATCGCTGCTGGTCTGGGGGAATGCCTTCCTTGTCTTGAATCTTGGTCTT 789467 Query 133583 GAGCTGCTCAACCGTGTCGGTGGGCTCCACGTCGACGGTGACGGTTTTGCCGGTCAGAGT 133642 || | || | |||||| | || ||| || |||| ||||| || ||||| || || || Sbjct 789466 GACATTGTCGATCGTGTCCGAGGACTCGACCTCGAGGGTGATCGTCTTGCCCGTAAGCGT 789407 Query 133643 TTTTACGAAAATCTGCAT 133660 || ||||| || ||||| Sbjct 789406 CTTGACGAAGATTTGCAT 789389 Score = 125 bits (138), Expect = 7e-24 Identities = 148/198 (75%), Gaps = 2/198 (1%) Strand=Plus/Minus Query 133464 GTGGACTCTTTCTGTATATTGTAATCGCCCATCGTG-GACGAGTCCTCGAGCTGCTTGCC 133522 || ||||| ||||| || |||||||| | | |||| | | | ||||||||||||||||| Sbjct 789357 GTCGACTCCTTCTGAATGTTGTAATCCGCGAGCGTGCGGCCA-TCCTCGAGCTGCTTGCC 789299 Query 133523 CGCGTAAATGAGCCGCTGCTGGTCGGGAGGGATGCCTTCCTTGTCGGTGATCTTTTGCTT 133582 ||| | ||||| || || ||||| || || || || |||||||| |||||| ||| Sbjct 789298 CGCAAAGATGAGACGTTGTTGGTCTGGGGGAATACCCTCCTTGTCTTGGATCTTGGTCTT 789239 Query 133583 GAGCTGCTCAACCGTGTCGGTGGGCTCCACGTCGACGGTGACGGTTTTGCCGGTCAGAGT 133642 || | |||| |||||| | || ||| || |||| ||||| || ||||| || || || Sbjct 789238 GACATTGTCAATCGTGTCCGAGGACTCGACCTCGAGGGTGATCGTCTTGCCCGTAAGCGT 789179 Query 133643 TTTTACGAAAATCTGCAT 133660 || ||||| || ||||| Sbjct 789178 CTTGACGAAGATTTGCAT 789161 Score = 116 bits (128), Expect = 4e-21 Identities = 146/198 (74%), Gaps = 2/198 (1%) Strand=Plus/Minus Query 133464 GTGGACTCTTTCTGTATATTGTAATCGCCCATCGTG-GACGAGTCCTCGAGCTGCTTGCC 133522 || ||||| ||||| || ||||| ||| | | ||| | | | ||||||||||||||||| Sbjct 547206 GTCGACTCCTTCTGGATGTTGTAGTCGGCGAGCGTACGGCCA-TCCTCGAGCTGCTTGCC 547148 Query 133523 CGCGTAAATGAGCCGCTGCTGGTCGGGAGGGATGCCTTCCTTGTCGGTGATCTTTTGCTT 133582 |||| | ||||| || || ||||| || || ||||| |||||||| ||||| ||| Sbjct 547147 CGCGAAGATGAGACGTTGTTGGTCTGGGGGAATGCCCTCCTTGTCCTGAATCTTGGCCTT 547088 Query 133583 GAGCTGCTCAACCGTGTCGGTGGGCTCCACGTCGACGGTGACGGTTTTGCCGGTCAGAGT 133642 || | || | |||||| | || ||| || |||| |||| || ||||| |||| || Sbjct 547087 GACGTTGTCGATCGTGTCCGAGGACTCAACCTCGAGCGTGATCGTCTTGCCTGTCAAGGT 547028 Query 133643 TTTTACGAAAATCTGCAT 133660 || ||||| || ||||| Sbjct 547027 CTTGACGAAGATTTGCAT 547010 Score = 102 bits (112), Expect = 8e-17 Identities = 143/198 (72%), Gaps = 2/198 (1%) Strand=Plus/Minus Query 133464 GTGGACTCTTTCTGTATATTGTAATCGCCCATCGTG-GACGAGTCCTCGAGCTGCTTGCC 133522 || ||||| ||||| || ||||||||| | | ||| | | | ||||||||||||||||| Sbjct 546978 GTCGACTCCTTCTGGATGTTGTAATCGGCGAGCGTACGGCCA-TCCTCGAGCTGCTTGCC 546920 Query 133523 CGCGTAAATGAGCCGCTGCTGGTCGGGAGGGATGCCTTCCTTGTCGGTGATCTTTTGCTT 133582 |||| | ||||| || || ||||| || || ||||| ||||| || ||||| ||| Sbjct 546919 CGCGAAGATGAGACGTTGTTGGTCTGGGGGAATGCCCTCCTTATCCTGAATCTTAGCCTT 546860 Query 133583 GAGCTGCTCAACCGTGTCGGTGGGCTCCACGTCGACGGTGACGGTTTTGCCGGTCAGAGT 133642 | | || | |||||| | || ||| || || | |||| || |||||||| | || Sbjct 546859 TACGTTGTCGATCGTGTCCGAGGACTCAACCTCAAGCGTGATCGTCTTGCCGGTTAAGGT 546800 Query 133643 TTTTACGAAAATCTGCAT 133660 || || || || ||||| Sbjct 546799 CTTGACAAAGATTTGCAT 546782 >seq45 Length=1665130 Score = 89.7 bits (98), Expect = 5e-13 Identities = 180/259 (69%), Gaps = 15/259 (6%) Strand=Plus/Plus Query 120494 ACTCGCACATGGACTGCGCGTTCATGCCCAGCAA--CGCCACCGGCAACGCCGACGTGAA 120551 ||| ||||||| || || |||||||| | ||| ||| | || | ||| || || Sbjct 330870 ACTGGCACATGAGCTTGGCATTCATGCCGATCAAACCGCAA--GGAAGAGCCTCGGTCAA 330927 Query 120552 AAACTCCTTCTCAATGTCCACCGCCTCCTTGAACATG-GCGAGCATAGTGTGGCCGGGCA 120610 || |||||||| || || || || ||||| | ||| ||| | | ||| | ||| Sbjct 330928 GAATTCCTTCTCGATCTCGACGGCTTCCTTAATGATGAGCGCG---ACGGTGTCGGGG-- 330982 Query 120611 TCTTGTGTTCGATGCGCGTTCGGTAGTACA---GGCACGCAAAGTCCGTGTGCAGGCCCT 120667 | || |||| | || | | || || ||| |||| |||||||| ||||| ||||||| Sbjct 330983 TGAGGTCTTCGCT-CGAGGTGGG-AGAACAAGAGGCAAGCAAAGTCGGTGTGAAGGCCCT 331040 Query 120668 CGTCGCGCGATATCAGCTCGTTGCTAAACGTCAGGCCGGGCATGATGCCTTTCGTCTTGA 120727 |||| ||||| || ||||||||| || |||| |||||||| | ||| | |||||| Sbjct 331041 CGTCACGCGAAATGAGCTCGTTGGAGAAGGTCAATCCGGGCATCAAGCCACGCTTCTTGA 331100 Query 120728 TGTAGAATATGGCGGCAAA 120746 |||| |||| ||||| Sbjct 331101 GCCAGAAGATGGAAGCAAA 331119 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 483420364921280