Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Microbotryum_20saponariae_20[genbank_20GCA_5F900015475.1_202016-12- 23] 72 sequences; 28,653,577 total letters Query= NC_025412.1 Length=369360 Score E Sequences producing significant alignments: (Bits) Value seq55 91.5 3e-13 seq20 87.8 4e-12 >seq55 Length=539833 Score = 91.5 bits (100), Expect = 3e-13 Identities = 134/190 (71%), Gaps = 0/190 (0%) Strand=Plus/Plus Query 206184 CAAAACGCTCACAGGAAAAACGATCACTTTGGAAGTGGAAAGTTCTGACACAGTCGAATC 206243 ||| || || || || || |||||||| | || || || || ||||| |||| Sbjct 107319 CAAGACTCTTACGGGCAAGACGATCACCCTCGAGGTCGAGTCGTCCGACACGATCGACAA 107378 Query 206244 AGTAAAGCAAAAGATTCAAGAAAAAGAAGGAATTTTGCCGGACGCTCAAAGACTTATCTT 206303 || ||| ||||| ||||| || ||||| || || ||| ||| | || ||||| Sbjct 107379 CGTCAAGACCAAGATCCAAGACAAGGAAGGCATCCCCCCAGACCAGCAACGTCTCATCTT 107438 Query 206304 CGCCGGAAAGCAGTTGGAAGATGGAAGGACTTTGGCCGATTACAACGTCCAGAAAGAGTC 206363 |||||| |||||| | || ||||| | || |||||||| |||||| |||| || ||||| Sbjct 107439 CGCCGGCAAGCAGCTCGAGGATGGCCGCACCTTGGCCGACTACAACATCCAAAAGGAGTC 107498 Query 206364 TACTCTTCAC 206373 || || ||| Sbjct 107499 GACCCTCCAC 107508 >seq20 Length=1456699 Score = 87.8 bits (96), Expect = 4e-12 Identities = 140/201 (70%), Gaps = 0/201 (0%) Strand=Plus/Plus Query 206173 CAGATATTTTGCAAAACGCTCACAGGAAAAACGATCACTTTGGAAGTGGAAAGTTCTGAC 206232 || || ||| ||| || | || || || |||||||| | || || || || ||| Sbjct 546785 CAAATCTTTGTCAAGACCTTAACCGGCAAGACGATCACGCTTGAGGTTGAGTCCTCGGAC 546844 Query 206233 ACAGTCGAATCAGTAAAGCAAAAGATTCAAGAAAAAGAAGGAATTTTGCCGGACGCTCAA 206292 || |||| |||||| |||||||| || || || || ||| || ||| ||| Sbjct 546845 ACGATCGACAACGTAAAGGCTAAGATTCAGGATAAGGAGGGCATTCCCCCAGACCAACAA 546904 Query 206293 AGACTTATCTTCGCCGGAAAGCAGTTGGAAGATGGAAGGACTTTGGCCGATTACAACGTC 206352 | || |||||||| || |||||| | || ||||| | || | |||||||||||| || Sbjct 546905 CGTCTCATCTTCGCGGGCAAGCAGCTCGAGGATGGCCGTACGCTCGCCGATTACAACATC 546964 Query 206353 CAGAAAGAGTCTACTCTTCAC 206373 ||||| ||||| || || ||| Sbjct 546965 CAGAAGGAGTCGACGCTGCAC 546985 Score = 86.0 bits (94), Expect = 1e-11 Identities = 133/190 (70%), Gaps = 0/190 (0%) Strand=Plus/Plus Query 206184 CAAAACGCTCACAGGAAAAACGATCACTTTGGAAGTGGAAAGTTCTGACACAGTCGAATC 206243 ||| ||||| || || || |||||||| | || || || || ||||| |||| Sbjct 789403 CAAGACGCTTACGGGCAAGACGATCACCCTCGAGGTCGAGTCCTCGGACACGATCGACAA 789462 Query 206244 AGTAAAGCAAAAGATTCAAGAAAAAGAAGGAATTTTGCCGGACGCTCAAAGACTTATCTT 206303 || ||| ||||||||||| || ||||| ||| || ||| || || | ||||| Sbjct 789463 TGTCAAGACCAAGATTCAAGACAAGGAAGGCATTCCCCCAGACCAGCAGCGATTGATCTT 789522 Query 206304 CGCCGGAAAGCAGTTGGAAGATGGAAGGACTTTGGCCGATTACAACGTCCAGAAAGAGTC 206363 ||| || |||||| | || ||||| | || | || ||||||||| | ||||| ||||| Sbjct 789523 CGCGGGCAAGCAGCTCGAGGATGGCCGCACGCTCGCGGATTACAACATTCAGAAGGAGTC 789582 Query 206364 TACTCTTCAC 206373 || || ||| Sbjct 789583 GACGCTCCAC 789592 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1181819709770312