Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Microbotryum_20saponariae_20[genbank_20GCA_5F900015475.1_202016-12-
23] 72 sequences; 28,653,577 total letters
Query= NC_025412.1
Length=369360
Score E
Sequences producing significant alignments: (Bits) Value
seq55 91.5 3e-13
seq20 87.8 4e-12
>seq55
Length=539833
Score = 91.5 bits (100), Expect = 3e-13
Identities = 134/190 (71%), Gaps = 0/190 (0%)
Strand=Plus/Plus
Query 206184 CAAAACGCTCACAGGAAAAACGATCACTTTGGAAGTGGAAAGTTCTGACACAGTCGAATC 206243
||| || || || || || |||||||| | || || || || ||||| ||||
Sbjct 107319 CAAGACTCTTACGGGCAAGACGATCACCCTCGAGGTCGAGTCGTCCGACACGATCGACAA 107378
Query 206244 AGTAAAGCAAAAGATTCAAGAAAAAGAAGGAATTTTGCCGGACGCTCAAAGACTTATCTT 206303
|| ||| ||||| ||||| || ||||| || || ||| ||| | || |||||
Sbjct 107379 CGTCAAGACCAAGATCCAAGACAAGGAAGGCATCCCCCCAGACCAGCAACGTCTCATCTT 107438
Query 206304 CGCCGGAAAGCAGTTGGAAGATGGAAGGACTTTGGCCGATTACAACGTCCAGAAAGAGTC 206363
|||||| |||||| | || ||||| | || |||||||| |||||| |||| || |||||
Sbjct 107439 CGCCGGCAAGCAGCTCGAGGATGGCCGCACCTTGGCCGACTACAACATCCAAAAGGAGTC 107498
Query 206364 TACTCTTCAC 206373
|| || |||
Sbjct 107499 GACCCTCCAC 107508
>seq20
Length=1456699
Score = 87.8 bits (96), Expect = 4e-12
Identities = 140/201 (70%), Gaps = 0/201 (0%)
Strand=Plus/Plus
Query 206173 CAGATATTTTGCAAAACGCTCACAGGAAAAACGATCACTTTGGAAGTGGAAAGTTCTGAC 206232
|| || ||| ||| || | || || || |||||||| | || || || || |||
Sbjct 546785 CAAATCTTTGTCAAGACCTTAACCGGCAAGACGATCACGCTTGAGGTTGAGTCCTCGGAC 546844
Query 206233 ACAGTCGAATCAGTAAAGCAAAAGATTCAAGAAAAAGAAGGAATTTTGCCGGACGCTCAA 206292
|| |||| |||||| |||||||| || || || || ||| || ||| |||
Sbjct 546845 ACGATCGACAACGTAAAGGCTAAGATTCAGGATAAGGAGGGCATTCCCCCAGACCAACAA 546904
Query 206293 AGACTTATCTTCGCCGGAAAGCAGTTGGAAGATGGAAGGACTTTGGCCGATTACAACGTC 206352
| || |||||||| || |||||| | || ||||| | || | |||||||||||| ||
Sbjct 546905 CGTCTCATCTTCGCGGGCAAGCAGCTCGAGGATGGCCGTACGCTCGCCGATTACAACATC 546964
Query 206353 CAGAAAGAGTCTACTCTTCAC 206373
||||| ||||| || || |||
Sbjct 546965 CAGAAGGAGTCGACGCTGCAC 546985
Score = 86.0 bits (94), Expect = 1e-11
Identities = 133/190 (70%), Gaps = 0/190 (0%)
Strand=Plus/Plus
Query 206184 CAAAACGCTCACAGGAAAAACGATCACTTTGGAAGTGGAAAGTTCTGACACAGTCGAATC 206243
||| ||||| || || || |||||||| | || || || || ||||| ||||
Sbjct 789403 CAAGACGCTTACGGGCAAGACGATCACCCTCGAGGTCGAGTCCTCGGACACGATCGACAA 789462
Query 206244 AGTAAAGCAAAAGATTCAAGAAAAAGAAGGAATTTTGCCGGACGCTCAAAGACTTATCTT 206303
|| ||| ||||||||||| || ||||| ||| || ||| || || | |||||
Sbjct 789463 TGTCAAGACCAAGATTCAAGACAAGGAAGGCATTCCCCCAGACCAGCAGCGATTGATCTT 789522
Query 206304 CGCCGGAAAGCAGTTGGAAGATGGAAGGACTTTGGCCGATTACAACGTCCAGAAAGAGTC 206363
||| || |||||| | || ||||| | || | || ||||||||| | ||||| |||||
Sbjct 789523 CGCGGGCAAGCAGCTCGAGGATGGCCGCACGCTCGCGGATTACAACATTCAGAAGGAGTC 789582
Query 206364 TACTCTTCAC 206373
|| || |||
Sbjct 789583 GACGCTCCAC 789592
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 1181819709770312
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |