Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Microbotryum_20saponariae_20[genbank_20GCA_5F900015475.1_202016-12-
23] 72 sequences; 28,653,577 total letters
Query= NC_026440.1
Length=2243109
Score E
Sequences producing significant alignments: (Bits) Value
seq41 219 6e-51
seq39 127 3e-23
seq45 111 2e-18
>seq41
Length=447122
Score = 219 bits (242), Expect = 6e-51
Identities = 204/259 (79%), Gaps = 0/259 (0%)
Strand=Plus/Minus
Query 259923 CGCCCACGCTCTTTAATGCCGGCACGCCGCGCCCGCAGAATTCGTCGTGCTTTCTGTTGG 259982
|||| |||||||| || ||||| ||||| | ||||||| ||||||||| || ||| |
Sbjct 424124 CGCCGACGCTCTTCAACGCCGGAACGCCTCACCCGCAGCTTTCGTCGTGTTTCCTGGTCA 424065
Query 259983 ACATGAAGGCCGATTCGATCGAGGGCATCTATGACACGCTCAAGCAGTGCGCGCTCATCT 260042
|||||||| ||| |||||||| |||||||| |||||||||||| ||||||||||||||
Sbjct 424064 CCATGAAGGACGACTCGATCGAAGGCATCTACGACACGCTCAAGACGTGCGCGCTCATCT 424005
Query 260043 CCAAGGCGGCCGGCGGCATCGGTTTTGCCGCACACAAGGTGCGCGCCGCGGGCGCCTACG 260102
||||| | ||||| || |||||||| | ||||| | ||||| | ||| | |||
Sbjct 424004 CCAAGACCGCCGGTGGTATCGGTTTGAGCATCCACAACATCCGCGCGACCGGCTCTTACA 423945
Query 260103 TGGCGGGCACCAACGGCCAGTCCAACGGCCTTGTGCCCATGCTTCGCGTTTTTAACGACA 260162
| || ||||| |||||| | || |||||| | || |||||||| || || | ||| |||
Sbjct 423944 TCGCCGGCACGAACGGCTACTCGAACGGCATCGTCCCCATGCTCCGTGTCTACAACAACA 423885
Query 260163 CGGCGCGCTACGTCGACCA 260181
| |||||||||||||||||
Sbjct 423884 CCGCGCGCTACGTCGACCA 423866
Score = 120 bits (132), Expect = 4e-21
Identities = 301/458 (66%), Gaps = 10/458 (2%)
Strand=Plus/Minus
Query 261788 GGCGGCGGCAAGCGCAAGGGCGCCTTTGCCTGCTACCTGGAACCGTGGCACGCCGACCTC 261847
|| ||| |||||| || ||||| || |||||| || || |||||||| ||| ||
Sbjct 423864 GGTGGCAACAAGCGTCCCGGAGCCTTCGCGATCTACCTCGAGCCATGGCACGCTGACGTC 423805
Query 261848 ATCAACTGGCTGGACCTCAAAAAGAACCACGGCAAGGGAGGGGGAGAACCGGGCGCGCGC 261907
|| | | |||||||| ||||||||||||| ||| |||| || |||| ||
Sbjct 423804 TTCGAGTTCCTGGACCTTCGCAAGAACCACGGCA----AGGAGGAGGTCC--GCGCTCGT 423751
Query 261908 GATCTCTTTTACGGCCTGTGGACGTGCGACCTGTTTATGCGCCGCATGGTGACCGGCCGC 261967
|||||||| | | || |||| ||| ||||||||| || | | | ||| | ||
Sbjct 423750 GATCTCTTCTTTGCGCTCTGGATTCCCGATCTGTTTATGGAGCGTGTCGAGGCCGCCAGC 423691
Query 261968 GACTGGTCGCTCTTTTGCCCGTCCGAGGCGCCCGGCCTGCACGAATGCTATGGCGCGGCC 262027
|| ||| | ||||| ||||| | || || |||||||| |||||| |||||||| |
Sbjct 423690 GAGTGGCCCCTCTTCTGCCCCGCTGAAGCCCCCGGCCTCCACGAAGTCTATGGCGAAGAG 423631
Query 262028 TTTGACGCCCTCTATGAGNNNNNNNNNNNNNNNNNNNNNNCGCGGACCGTCG-TGCCCGC 262086
|| |||| | | ||| | || | || | |||||
Sbjct 423630 TTCCGCGCCTTGTTCGAGAAATACGAAAAGGAGGGCCGCGCCAAGA-AGACGATCCCCGC 423572
Query 262087 ACGACAGATCTGGTCGGCCATTGTCGCGGCCCATATCGAGACCGGCACGCCCTACATGGT 262146
| | || | |||| || ||| | | ||||| |||| ||||||| || | |||| |
Sbjct 423571 GCAAAAGCTTTGGTACGCGATTCTTGAAGCCCAGGTCGAAACCGGCAACCCGTTCATGCT 423512
Query 262147 CTACAAGGACGCCGTCAACCTGACCAGC-AACCAGCAGAACCTGGGCACCACGACAGAGG 262205
|||||||||||||| ||| | | | | ||||| ||||||| ||||| | | |
Sbjct 423511 CTACAAGGACGCCG-CAAACAAAAAATCGAACCAAAAGAACCTTGGCACGATCAAGTCGT 423453
Query 262206 CCAACCTGTGCACCGAGATCGTCCAGTTTTCGTCGCCC 262243
| ||| |||||||||||||| || ||| ||| |||||
Sbjct 423452 CGAACTTGTGCACCGAGATCATCGAGTACTCGGCGCCC 423415
Score = 100 bits (110), Expect = 4e-15
Identities = 174/245 (71%), Gaps = 6/245 (2%)
Strand=Plus/Minus
Query 263172 CGATCTCAAGGCTCTCTTCAAGACCGTGTGGGAGGTGCC-CAACCGGGTGACCATTGATA 263230
|||||||||||| ||| ||||||||| |||||| | | ||| | | | || |||
Sbjct 422494 CGATCTCAAGGCCATCTACAAGACCGTCTGGGAGCTCTCGCAAAAGACT-ATTATCGATC 422436
Query 263231 TGGCGGCCGACCGCGCGCCCTATGTCGACCAGAGCCAGTCGCTCAACCTGTACCTCGCCG 263290
|| ||||||| || | ||| |||||||| || ||||||||| | || | | ||
Sbjct 422435 TGTCGGCCGATCGAGGCGCCTTCATCGACCAGTCGCAATCGCTCAACATCCACTT-GTCG 422377
Query 263291 A-CCCGACGGCCG-AGAGCATCACGTCGATGCACGCCTATGCGTGGCGTCGCGGCCTCAA 263348
| ||||||| | | ||| |||||||||||||| ||| | ||| || || || ||
Sbjct 422376 AGCCCGACGATGGCACAGC-TCACGTCGATGCACTTCTACGGCTGGAAGCGAGGACTGAA 422318
Query 263349 GACTGGCATGTACTATCTGCGCACCCGGCCCGCTGCCAACGCCATTCAATTCACCGTCGA 263408
||| ||||||||||| ||||||| || |||| | || || | |||||||||||
Sbjct 422317 GACGGGCATGTACTACTTGCGCACGCGCGCCGCCGTTGGTGCGATCAAGTTCACCGTCGA 422258
Query 263409 TCAGG 263413
||||
Sbjct 422257 CCAGG 422253
>seq39
Length=1650036
Score = 127 bits (140), Expect = 3e-23
Identities = 169/230 (73%), Gaps = 16/230 (7%)
Strand=Plus/Plus
Query 724916 CAAGGTGCTCAAGCAGGTGCACCCCCGAACCGTTGGGCCATCCTCCAACAAGTCCATGTC 724975
||||||| | |||||||| |||||| |||| | ||| || |||||| | |||
Sbjct 1300454 CAAGGTGTTGAAGCAGGTCCACCCCGACACCGGT-----ATC-TCGAACAAGGCGATGCT 1300507
Query 724976 GATCATGAACTCGTTTGTCAACGACATGATCGACCGCATCGGCACCGAGGCCGGTC--GC 725033
|||| | |||||||| ||||||||||| |||| ||||||| ||||||||| |||
Sbjct 1300508 GATCCTCAACTCGTTCGTCAACGACATCTTCGAGCGCATCGCCACCGAGGC--GTCCAAG 1300565
Query 725034 CTGGCGCGCTCCAACAAGCGCAA---CACGATCGGCACGCGCGAGATCCAGACCGCCGTG 725090
|| ||| ||| |||| ||||| || ||| ||||||||||||||||| | ||
Sbjct 1300566 CTCGCGGGCT---ACAACCGCAAGTCGACCATCTCGTCGCGCGAGATCCAGACCTCGGTC 1300622
Query 725091 CGCCTGATCATGCGCGGCGAACTGGCCAGGCACGCCGTCTCCGAGGGCAC 725140
|| ||||| | | ||| || ||| ||| ||||||| |||| || |||||
Sbjct 1300623 CGATTGATCCTCCCCGGAGAGCTGTCCAAGCACGCCATCTCGGAAGGCAC 1300672
Score = 127 bits (140), Expect = 3e-23
Identities = 169/230 (73%), Gaps = 16/230 (7%)
Strand=Plus/Plus
Query 724916 CAAGGTGCTCAAGCAGGTGCACCCCCGAACCGTTGGGCCATCCTCCAACAAGTCCATGTC 724975
||||||| | |||||||| |||||| |||| | ||| || |||||| | |||
Sbjct 1402307 CAAGGTGTTGAAGCAGGTCCACCCCGACACCGGT-----ATC-TCGAACAAGGCGATGCT 1402360
Query 724976 GATCATGAACTCGTTTGTCAACGACATGATCGACCGCATCGGCACCGAGGCCGGTC--GC 725033
|||| | |||||||| ||||||||||| |||| ||||||| ||||||||| |||
Sbjct 1402361 GATCCTCAACTCGTTCGTCAACGACATCTTCGAGCGCATCGCCACCGAGGC--GTCCAAG 1402418
Query 725034 CTGGCGCGCTCCAACAAGCGCAA---CACGATCGGCACGCGCGAGATCCAGACCGCCGTG 725090
|| ||| ||| |||| ||||| || ||| ||||||||||||||||| | ||
Sbjct 1402419 CTCGCGGGCT---ACAACCGCAAGTCGACCATCTCGTCGCGCGAGATCCAGACCTCGGTC 1402475
Query 725091 CGCCTGATCATGCGCGGCGAACTGGCCAGGCACGCCGTCTCCGAGGGCAC 725140
|| ||||| | | ||| || ||| ||| ||||||| |||| || |||||
Sbjct 1402476 CGATTGATCCTCCCCGGAGAGCTGTCCAAGCACGCCATCTCGGAAGGCAC 1402525
>seq45
Length=1665130
Score = 111 bits (122), Expect = 2e-18
Identities = 164/230 (71%), Gaps = 12/230 (5%)
Strand=Plus/Minus
Query 724916 CAAGGTGCTCAAGCAGGTGCACCCCCGAACCGTTGGGCCATCCTCCAACAAGTCCATGTC 724975
||| ||| | |||||||| |||||| |||| | ||| || |||||| | |||
Sbjct 97735 CAAAGTGTTGAAGCAGGTCCACCCCGACACCGGT-----ATC-TCGAACAAGGCGATGCT 97682
Query 724976 GATCATGAACTCGTTTGTCAACGACATGATCGACCGCATCGGCACCGAGGCCGGTCGCCT 725035
||| | |||||||| ||||||||||| |||| || |||| ||||||||| ||
Sbjct 97681 CATCCTCAACTCGTTCGTCAACGACATCTTCGAGCGTATCGCCACCGAGGCATCCAAACT 97622
Query 725036 GGCGCGCTCCAACAAGCGCAA---CACGATCGGCACGCGCGAGATCCAGACCGCCGTGCG 725092
||| ||| |||| ||||| || ||| |||| |||||||| ||| | || ||
Sbjct 97621 CGCGGGCT---ACAACCGCAAGTCGACCATCTCGTCGCGAGAGATCCAAACCTCGGTTCG 97565
Query 725093 CCTGATCATGCGCGGCGAACTGGCCAGGCACGCCGTCTCCGAGGGCACCA 725142
| ||||| | | ||| ||| || ||| ||||||| |||| || |||||||
Sbjct 97564 CTTGATCCTCCCCGGAGAATTGTCCAAGCACGCCATCTCGGAAGGCACCA 97515
Score = 111 bits (122), Expect = 2e-18
Identities = 171/238 (72%), Gaps = 7/238 (3%)
Strand=Plus/Minus
Query 1455775 GATATGGGAAATGTACCAAAAAGGCCGAGGCCTCCTTTTGGACCGCCGAGGAGGTCGACC 1455834
||| |||| | |||| || ||||||||||| ||||||||||||||||| ||| | |||
Sbjct 331850 GATCTGGGCACAGTAC-AAGAAGGCCGAGGCATCCTTTTGGACCGCCGAAGAGATGGACT 331792
Query 1455835 TCGGCGCCGACACGGTCCACTGGGTGTC---GCTGAGCGACGACGAGCGCCATTTCATCA 1455891
| | |||| | | |||||| ||| | |||||||||| | ||||||
Sbjct 331791 TGTCCAAGGACATGCACGACTGGGACAACAAGCTCAAGCCCGACGAGCGCTACTTCATCT 331732
Query 1455892 AGCACGTCCTCGCCTTTTTTCGCCGCCAGCGATGGCATCGTGGCCGAGAACCTGGCCGGC 1455951
|||||||||||||| ||||||||||| ||| ||||| || ||||||| ||| ||
Sbjct 331731 CGCACGTCCTCGCCT-TTTTCGCCGCCTCCGACGGCATTGTCAACGAGAACTTGGTCGAG 331673
Query 1455952 CGCTT-TATGAAAGAGGTCCAATTGCCAGAGGCACGTTTGTTTTACGGGTTCCAGATC 1456008
|| || | || |||||||| | | ||||| || | || ||||| ||||| |||
Sbjct 331672 CGATTCTCTG-GTGAGGTCCAGTCCGCCGAGGCTCGATGCTTCTACGGTTTCCAAATC 331616
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 7177804255467664
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |