Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Microbotryum_20saponariae_20[genbank_20GCA_5F900015475.1_202016-12- 23] 72 sequences; 28,653,577 total letters Query= NC_026511.1 Length=140913 Score E Sequences producing significant alignments: (Bits) Value seq20 116 3e-21 seq55 109 5e-19 seq36 105 6e-18 >seq20 Length=1456699 Score = 116 bits (128), Expect = 3e-21 Identities = 162/227 (71%), Gaps = 0/227 (0%) Strand=Plus/Minus Query 35510 CCACCACGTAACCTCAACACCAAATGTAACGTACTCTCCTTTTGAATGTTGTAATCGGCC 35569 |||||||| | | || |||||| || | ||| |||||| |||||||||||||| || Sbjct 789615 CCACCACGGAGACGCAGCACCAAGTGGAGCGTCGACTCCTTCTGAATGTTGTAATCCGCG 789556 Query 35570 AAGGTTCGCTCGTCGTCCAGCTGCTTACCCGCAAATATCAACCGCTGCTGGTCCGAAGGA 35629 | || || | || || |||||||| ||||| || ||||| ||||||||||| | ||| Sbjct 789555 AGCGTGCGGCCATCCTCGAGCTGCTTGCCCGCGAAGATCAATCGCTGCTGGTCTGGGGGA 789496 Query 35630 ACGCTCTCCTTGTCCATGATCTTTTGCTTCAGAGTTGCCACCGTGTCGCTCGATTCCACC 35689 | || |||||||| ||||| ||| | | | | | |||||| || || ||| Sbjct 789495 ATGCCTTCCTTGTCTTGAATCTTGGTCTTGACATTGTCGATCGTGTCCGAGGACTCGACC 789436 Query 35690 TCCACCGTGATCGTTTTACCCGTCAAAGTTTTCACAAATATCTGCAT 35736 || | |||||||| || ||||| | || || || || || ||||| Sbjct 789435 TCGAGGGTGATCGTCTTGCCCGTAAGCGTCTTGACGAAGATTTGCAT 789389 Score = 104 bits (114), Expect = 2e-17 Identities = 151/211 (72%), Gaps = 2/211 (1%) Strand=Plus/Minus Query 35527 CACCAAATGTAACGTACTCTCCTTTTGAATGTTGTAATCGGCCAAGGTTCGCTCGTCGTC 35586 |||||| || | ||| |||||| || |||||||||||||| | || || | || || Sbjct 546991 CACCAAGTGCAGCGTCGACTCCTTCTGGATGTTGTAATCGGCGAGCGTACGGCCATCCTC 546932 Query 35587 CAGCTGCTTACCCGCAAATATCAACCGCTGCTGGTCCGAAGGAACGCTCTCCTTGTCCAT 35646 |||||||| ||||| || || | || || ||||| | |||| || |||||| ||| Sbjct 546931 GAGCTGCTTGCCCGCGAAGATGAGACGTTGTTGGTCTGGGGGAATGCCCTCCTTATCCTG 546872 Query 35647 GATCTTTTGCTTCAGAGTTG-CCACCGTGTCGCTCGATTCCACCTCCACCGTGATCGTTT 35705 ||||| ||| | |||| | | |||||| || || ||||| | ||||||||| | Sbjct 546871 AATCTTAGCCTTTA-CGTTGTCGATCGTGTCCGAGGACTCAACCTCAAGCGTGATCGTCT 546813 Query 35706 TACCCGTCAAAGTTTTCACAAATATCTGCAT 35736 | || || || || || ||||| || ||||| Sbjct 546812 TGCCGGTTAAGGTCTTGACAAAGATTTGCAT 546782 Score = 104 bits (114), Expect = 2e-17 Identities = 159/227 (70%), Gaps = 0/227 (0%) Strand=Plus/Minus Query 35510 CCACCACGTAACCTCAACACCAAATGTAACGTACTCTCCTTTTGAATGTTGTAATCGGCC 35569 |||||||| | | | |||||| || | ||| |||||| |||||||||||||| || Sbjct 789387 CCACCACGGAGACGGAGCACCAAGTGGAGCGTCGACTCCTTCTGAATGTTGTAATCCGCG 789328 Query 35570 AAGGTTCGCTCGTCGTCCAGCTGCTTACCCGCAAATATCAACCGCTGCTGGTCCGAAGGA 35629 | || || | || || |||||||| |||||||| || | || || ||||| | ||| Sbjct 789327 AGCGTGCGGCCATCCTCGAGCTGCTTGCCCGCAAAGATGAGACGTTGTTGGTCTGGGGGA 789268 Query 35630 ACGCTCTCCTTGTCCATGATCTTTTGCTTCAGAGTTGCCACCGTGTCGCTCGATTCCACC 35689 | | ||||||||| |||||| ||| | | | | | |||||| || || ||| Sbjct 789267 ATACCCTCCTTGTCTTGGATCTTGGTCTTGACATTGTCAATCGTGTCCGAGGACTCGACC 789208 Query 35690 TCCACCGTGATCGTTTTACCCGTCAAAGTTTTCACAAATATCTGCAT 35736 || | |||||||| || ||||| | || || || || || ||||| Sbjct 789207 TCGAGGGTGATCGTCTTGCCCGTAAGCGTCTTGACGAAGATTTGCAT 789161 Score = 100 bits (110), Expect = 3e-16 Identities = 148/210 (70%), Gaps = 0/210 (0%) Strand=Plus/Minus Query 35527 CACCAAATGTAACGTACTCTCCTTTTGAATGTTGTAATCGGCCAAGGTTCGCTCGTCGTC 35586 |||||| || | ||| |||||| |||||||||||||| || | || || | || || Sbjct 789142 CACCAAGTGGAGCGTCGACTCCTTCTGAATGTTGTAATCCGCGAGCGTGCGGCCATCCTC 789083 Query 35587 CAGCTGCTTACCCGCAAATATCAACCGCTGCTGGTCCGAAGGAACGCTCTCCTTGTCCAT 35646 |||||||| |||||||| || | || || ||||| | |||| | ||||||||| Sbjct 789082 GAGCTGCTTGCCCGCAAAGATGAGACGTTGTTGGTCTGGGGGAATACCCTCCTTGTCTTG 789023 Query 35647 GATCTTTTGCTTCAGAGTTGCCACCGTGTCGCTCGATTCCACCTCCACCGTGATCGTTTT 35706 |||||| ||| | | | | | |||||| || || ||||| | ||||| || || Sbjct 789022 GATCTTGGTCTTGACATTGTCAATCGTGTCCGAGGACTCGACCTCGAGGGTGATGGTCTT 788963 Query 35707 ACCCGTCAAAGTTTTCACAAATATCTGCAT 35736 || ||||| || || || || || ||||| Sbjct 788962 GCCGGTCAAGGTCTTGACGAAGATTTGCAT 788933 >seq55 Length=539833 Score = 109 bits (120), Expect = 5e-19 Identities = 151/209 (72%), Gaps = 2/209 (1%) Strand=Plus/Minus Query 35527 CACCAAATGTAACGTACTCTCCTTTTGAATGTTGTAATCGGCCAAGGTTCGCTCGTCGTC 35586 |||||| || | || ||||||||| |||||||| ||||||||||| || | || || Sbjct 107514 CACCAAGTGGAGGGTCGACTCCTTTTGGATGTTGTAGTCGGCCAAGGTGCGGCCATCCTC 107455 Query 35587 CAGCTGCTTACCCGCAAATATCAACCGCTGCTGGTCCGAAGGAACGCTCTCCTTGTCCAT 35646 |||||||| || || || || | || |||||||| | || | || |||||||| Sbjct 107454 GAGCTGCTTGCCGGCGAAGATGAGACGTTGCTGGTCTGGGGGGATGCCTTCCTTGTCTTG 107395 Query 35647 GATCTTTTGCTTCAGAGTTG-CCACCGTGTCGCTCGATTCCACCTCCACCGTGATCGTTT 35705 |||||| ||| | |||| | | ||||||| ||| || ||||| | |||||||| | Sbjct 107394 GATCTTGGTCTTGA-CGTTGTCGATCGTGTCGGACGACTCGACCTCGAGGGTGATCGTCT 107336 Query 35706 TACCCGTCAAAGTTTTCACAAATATCTGC 35734 | ||||| | ||| || || || || ||| Sbjct 107335 TGCCCGTAAGAGTCTTGACGAAGATTTGC 107307 >seq36 Length=1841281 Score = 105 bits (116), Expect = 6e-18 Identities = 166/234 (71%), Gaps = 4/234 (2%) Strand=Plus/Plus Query 35510 CCACCACGTAACCTCAACACCAAATGTAACGTACTCTCCTTTTGAATGTTGTAATCGGCC 35569 |||||||| | | | |||||| || | ||| ||||||||| ||||||||||| || Sbjct 1559688 CCACCACGCAGGCGGAGCACCAAGTGGAGCGTCGACTCCTTTTGGATGTTGTAATCCGCG 1559747 Query 35570 AAGGTTCGCTCGTCGTCCAGCTGCTTACCCGCAAATATCAACCGCTGCTGGTCCGAAGGA 35629 | || || | || || |||||||| || ||||| || | || |||||||| | || Sbjct 1559748 AGCGTGCGGCCATCCTCGAGCTGCTTGCCGGCAAAGATGAGACGTTGCTGGTCGGGGGGG 1559807 Query 35630 ACGCTCTCCTTGTCCATGATCTTTTGCTTCAGAGTTG-CCACCGTGTCGCTCGATTCCAC 35688 | || ||||||||| |||||| ||| | |||| | | ||||||| ||| || || Sbjct 1559808 ATGCCTTCCTTGTCCTGGATCTTGGTCTTGA-CGTTGTCGATCGTGTCGGACGACTCGAC 1559866 Query 35689 CTCCACCGTGATCGTTTTACCCGTCAAAGTTTTCACAAATATCTGCATTCTGTG 35742 ||| | ||||| || || ||||| | || || || || || |||| ||||| Sbjct 1559867 CTCGAGGGTGATGGTCTTGCCCGTGAGGGTCTTGACGAAGATTTGCA--CTGTG 1559918 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 450793194285760