Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Microbotryum_20saponariae_20[genbank_20GCA_5F900015475.1_202016-12- 23] 72 sequences; 28,653,577 total letters Query= NC_026922.1 Length=157977 Score E Sequences producing significant alignments: (Bits) Value seq55 136 4e-27 seq20 131 2e-25 seq36 125 7e-24 seq41 89.7 5e-13 >seq55 Length=539833 Score = 136 bits (150), Expect = 4e-27 Identities = 165/225 (73%), Gaps = 0/225 (0%) Strand=Plus/Minus Query 134487 CCTCCTCTGAGTCGCAACACGAGGTGTAGCGTGGATTCCTTTTGAATGTTGTAGTCGCCA 134546 || |||| ||| || | ||| | ||| || || || |||||||| |||||||||||| | Sbjct 107531 CCACCTCGGAGGCGGAGCACCAAGTGGAGGGTCGACTCCTTTTGGATGTTGTAGTCGGCC 107472 Query 134547 ACGGTGTGAGAGTCGTCGAGCTGTTTGCCTGCAAAAATCAAACGCTGCTGATCGGGCGGT 134606 | |||| | || |||||||| ||||| || || || | ||| ||||| || || || Sbjct 107471 AAGGTGCGGCCATCCTCGAGCTGCTTGCCGGCGAAGATGAGACGTTGCTGGTCTGGGGGG 107412 Query 134607 ATGCCTTCTTTTTCTTGAATTTTTTGTTTGACCGCGTCCAATGTGTCGGACGATTCCACG 134666 |||||||| || ||||| || || ||||| ||| | ||||||||||| || || Sbjct 107411 ATGCCTTCCTTGTCTTGGATCTTGGTCTTGACGTTGTCGATCGTGTCGGACGACTCGACC 107352 Query 134667 TCGAGAGTAATGGTTTTACCGGTTAAAGTTTTAACGAAAATTTGC 134711 ||||| || || || || || || | ||| || ||||| |||||| Sbjct 107351 TCGAGGGTGATCGTCTTGCCCGTAAGAGTCTTGACGAAGATTTGC 107307 >seq20 Length=1456699 Score = 131 bits (144), Expect = 2e-25 Identities = 165/227 (73%), Gaps = 0/227 (0%) Strand=Plus/Minus Query 134487 CCTCCTCTGAGTCGCAACACGAGGTGTAGCGTGGATTCCTTTTGAATGTTGTAGTCGCCA 134546 || || | ||| |||| ||| | ||| ||||| || ||||| ||||||||||| || | Sbjct 789615 CCACCACGGAGACGCAGCACCAAGTGGAGCGTCGACTCCTTCTGAATGTTGTAATCCGCG 789556 Query 134547 ACGGTGTGAGAGTCGTCGAGCTGTTTGCCTGCAAAAATCAAACGCTGCTGATCGGGCGGT 134606 | ||| | || |||||||| ||||| || || ||||| |||||||| || || || Sbjct 789555 AGCGTGCGGCCATCCTCGAGCTGCTTGCCCGCGAAGATCAATCGCTGCTGGTCTGGGGGA 789496 Query 134607 ATGCCTTCTTTTTCTTGAATTTTTTGTTTGACCGCGTCCAATGTGTCGGACGATTCCACG 134666 |||||||| || |||||||| || ||||| ||| | ||||| || || || || Sbjct 789495 ATGCCTTCCTTGTCTTGAATCTTGGTCTTGACATTGTCGATCGTGTCCGAGGACTCGACC 789436 Query 134667 TCGAGAGTAATGGTTTTACCGGTTAAAGTTTTAACGAAAATTTGCAT 134713 ||||| || || || || || || | || || ||||| |||||||| Sbjct 789435 TCGAGGGTGATCGTCTTGCCCGTAAGCGTCTTGACGAAGATTTGCAT 789389 Score = 116 bits (128), Expect = 4e-21 Identities = 162/227 (71%), Gaps = 0/227 (0%) Strand=Plus/Minus Query 134487 CCTCCTCTGAGTCGCAACACGAGGTGTAGCGTGGATTCCTTTTGAATGTTGTAGTCGCCA 134546 || || | ||| || | ||| | ||| ||||| || ||||| ||||||||||| || | Sbjct 789159 CCACCGCGGAGACGGAGCACCAAGTGGAGCGTCGACTCCTTCTGAATGTTGTAATCCGCG 789100 Query 134547 ACGGTGTGAGAGTCGTCGAGCTGTTTGCCTGCAAAAATCAAACGCTGCTGATCGGGCGGT 134606 | ||| | || |||||||| ||||| ||||| || | ||| || || || || || Sbjct 789099 AGCGTGCGGCCATCCTCGAGCTGCTTGCCCGCAAAGATGAGACGTTGTTGGTCTGGGGGA 789040 Query 134607 ATGCCTTCTTTTTCTTGAATTTTTTGTTTGACCGCGTCCAATGTGTCGGACGATTCCACG 134666 || || || || ||||| || || ||||| ||| | ||||| || || || || Sbjct 789039 ATACCCTCCTTGTCTTGGATCTTGGTCTTGACATTGTCAATCGTGTCCGAGGACTCGACC 788980 Query 134667 TCGAGAGTAATGGTTTTACCGGTTAAAGTTTTAACGAAAATTTGCAT 134713 ||||| || ||||| || ||||| || || || ||||| |||||||| Sbjct 788979 TCGAGGGTGATGGTCTTGCCGGTCAAGGTCTTGACGAAGATTTGCAT 788933 Score = 114 bits (126), Expect = 1e-20 Identities = 164/231 (71%), Gaps = 0/231 (0%) Strand=Plus/Minus Query 134483 CTTTCCTCCTCTGAGTCGCAACACGAGGTGTAGCGTGGATTCCTTTTGAATGTTGTAGTC 134542 || ||| |||| ||| || | ||| | ||| ||||| || ||||| || ||||||||||| Sbjct 547240 CTGTCCGCCTCGGAGACGGAGCACCAAGTGCAGCGTCGACTCCTTCTGGATGTTGTAGTC 547181 Query 134543 GCCAACGGTGTGAGAGTCGTCGAGCTGTTTGCCTGCAAAAATCAAACGCTGCTGATCGGG 134602 | | | || | || |||||||| ||||| || || || | ||| || || || || Sbjct 547180 GGCGAGCGTACGGCCATCCTCGAGCTGCTTGCCCGCGAAGATGAGACGTTGTTGGTCTGG 547121 Query 134603 CGGTATGCCTTCTTTTTCTTGAATTTTTTGTTTGACCGCGTCCAATGTGTCGGACGATTC 134662 || ||||| || || || ||||| || ||||| ||| | ||||| || || || Sbjct 547120 GGGAATGCCCTCCTTGTCCTGAATCTTGGCCTTGACGTTGTCGATCGTGTCCGAGGACTC 547061 Query 134663 CACGTCGAGAGTAATGGTTTTACCGGTTAAAGTTTTAACGAAAATTTGCAT 134713 || ||||| || || || || || || || || || ||||| |||||||| Sbjct 547060 AACCTCGAGCGTGATCGTCTTGCCTGTCAAGGTCTTGACGAAGATTTGCAT 547010 Score = 104 bits (114), Expect = 2e-17 Identities = 159/227 (70%), Gaps = 0/227 (0%) Strand=Plus/Minus Query 134487 CCTCCTCTGAGTCGCAACACGAGGTGTAGCGTGGATTCCTTTTGAATGTTGTAGTCGCCA 134546 || || | ||| || | ||| | ||| ||||| || ||||| ||||||||||| || | Sbjct 789387 CCACCACGGAGACGGAGCACCAAGTGGAGCGTCGACTCCTTCTGAATGTTGTAATCCGCG 789328 Query 134547 ACGGTGTGAGAGTCGTCGAGCTGTTTGCCTGCAAAAATCAAACGCTGCTGATCGGGCGGT 134606 | ||| | || |||||||| ||||| ||||| || | ||| || || || || || Sbjct 789327 AGCGTGCGGCCATCCTCGAGCTGCTTGCCCGCAAAGATGAGACGTTGTTGGTCTGGGGGA 789268 Query 134607 ATGCCTTCTTTTTCTTGAATTTTTTGTTTGACCGCGTCCAATGTGTCGGACGATTCCACG 134666 || || || || ||||| || || ||||| ||| | ||||| || || || || Sbjct 789267 ATACCCTCCTTGTCTTGGATCTTGGTCTTGACATTGTCAATCGTGTCCGAGGACTCGACC 789208 Query 134667 TCGAGAGTAATGGTTTTACCGGTTAAAGTTTTAACGAAAATTTGCAT 134713 ||||| || || || || || || | || || ||||| |||||||| Sbjct 789207 TCGAGGGTGATCGTCTTGCCCGTAAGCGTCTTGACGAAGATTTGCAT 789161 >seq36 Length=1841281 Score = 125 bits (138), Expect = 7e-24 Identities = 158/217 (73%), Gaps = 0/217 (0%) Strand=Plus/Plus Query 134496 AGTCGCAACACGAGGTGTAGCGTGGATTCCTTTTGAATGTTGTAGTCGCCAACGGTGTGA 134555 || || | ||| | ||| ||||| || |||||||| |||||||| || | | ||| | Sbjct 1559697 AGGCGGAGCACCAAGTGGAGCGTCGACTCCTTTTGGATGTTGTAATCCGCGAGCGTGCGG 1559756 Query 134556 GAGTCGTCGAGCTGTTTGCCTGCAAAAATCAAACGCTGCTGATCGGGCGGTATGCCTTCT 134615 || |||||||| ||||| ||||| || | ||| ||||| ||||| || |||||||| Sbjct 1559757 CCATCCTCGAGCTGCTTGCCGGCAAAGATGAGACGTTGCTGGTCGGGGGGGATGCCTTCC 1559816 Query 134616 TTTTCTTGAATTTTTTGTTTGACCGCGTCCAATGTGTCGGACGATTCCACGTCGAGAGTA 134675 || || || || || ||||| ||| | ||||||||||| || || ||||| || Sbjct 1559817 TTGTCCTGGATCTTGGTCTTGACGTTGTCGATCGTGTCGGACGACTCGACCTCGAGGGTG 1559876 Query 134676 ATGGTTTTACCGGTTAAAGTTTTAACGAAAATTTGCA 134712 ||||| || || || | || || ||||| ||||||| Sbjct 1559877 ATGGTCTTGCCCGTGAGGGTCTTGACGAAGATTTGCA 1559913 >seq41 Length=447122 Score = 89.7 bits (98), Expect = 5e-13 Identities = 301/465 (65%), Gaps = 13/465 (3%) Strand=Plus/Minus Query 7524 CTACTTGTTGAAAATCAACGGCGAATGCGCGGAACGAATTCAACACATGCTGTTGCGCGT 7583 ||||||| | ||| ||||| | ||| ||||| ||||||||||| ||||||| Sbjct 424267 CTACTTGCTTCGCATCGACGGCAAGGTCGCCGAACGCCCGCAACACATGCTCATGCGCGT 424208 Query 7584 GGCGGTGGGCATTCACGGCGAAGACATTGACGCCGCCTTGGAAACGTACCAAATGATGTC 7643 || || ||||| ||||| | ||||| || || |||| | ||||| | | ||||| Sbjct 424207 CGCCGTCGGCATCCACGGTCACGACATCGAGCGCGTCTTGCAGTCGTACAACCTCATGTC 424148 Query 7644 TTTGAAACAGTTTACGCACGCTTCGCCCACCATGTTTGCCGCGGGCACAAACGC----GC 7699 | | ||||| ||||| ||||| || | || ||| || ||||| | Sbjct 424147 CGAGCGCTACTTTACCCACGCCTCGCCGACGCTCTTCAACGCCGG----AACGCCTCACC 424092 Query 7700 CTCAATTGTCCTCGTGTTTTTTGCTAACCATGCGCGAAGACAGCATCGACGGCATTTACA 7759 | || | || |||||||| || | |||||| || ||| ||||| ||||| ||| Sbjct 424091 CGCAGCTTTCGTCGTGTTTCCTGGTCACCATGAAGGACGACTCGATCGAAGGCATCTACG 424032 Query 7760 ACACGCTGCGCGA-TTGCGCCAATATTTCCAAATACGGCGGCGGAATAGGTCTGAACGTA 7818 ||||||| | || ||||| || ||||| || ||| || || ||| ||| | | Sbjct 424031 ACACGCT-CAAGACGTGCGCGCTCATCTCCAAGACCGCCGGTGGTATCGGTTTGAGCATC 423973 Query 7819 AACGACGTGCGCGCCAACGGTAGCCGCATCGTGTCCACCAACGGAAAAGCCAGCGGTTTA 7878 || || | ||||| | ||| ||||| ||| ||||| | | | ||| | Sbjct 423972 CACAACATCCGCGCGACCGGCTCTTACATCGCCGGCACGAACGGCTACTCGAACGGCATC 423913 Query 7879 GAGCCCATGTTGCGCGTGTTCAATAACGCGGTGCGACATGTAGACCAGGGGGG---AAAG 7935 | |||||| | || || | ||| ||| | | ||| | || ||||| || || ||| Sbjct 423912 GTCCCCATGCTCCGTGTCTACAACAACACCGCGCGCTACGTCGACCAAGGTGGCAACAAG 423853 Query 7936 CGCAAAGGCGCCGCTGCCATCTATTTGGAGCCGTGGCACGCGGAC 7980 || || ||| || ||||| | ||||| |||||||| ||| Sbjct 423852 CGTCCCGGAGCCTTCGCGATCTACCTCGAGCCATGGCACGCTGAC 423808 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 505397945141440