Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Microbotryum_20saponariae_20[genbank_20GCA_5F900015475.1_202016-12-
23] 72 sequences; 28,653,577 total letters
Query= NC_028091.1
Length=196300
Score E
Sequences producing significant alignments: (Bits) Value
seq41 161 1e-34
seq34 158 2e-33
seq45 125 9e-24
>seq41
Length=447122
Score = 161 bits (178), Expect = 1e-34
Identities = 551/856 (64%), Gaps = 11/856 (1%)
Strand=Plus/Plus
Query 111236 GCGATTGATGCCAAATTGCAAACAGCCGTCTCATCCTTATCTGTGTACTCTAAAATTTCT 111295
||||| || ||||| ||||| || || |||||| | | |||||| | || ||
Sbjct 423380 GCGATCGAGGCCAAGTTGCAGACGGCGCACTCATCGGGCGCCGAGTACTCGATGATCTCG 423439
Query 111296 GTACATAAGTTGGAACTCTTAATCGTCCCCAAATTCTTTTGGTTACTCTTCTTGTTGCAC 111355
|| || ||||| || ||| ||||| || | ||||||||||| || |||||
Sbjct 423440 GTGCACAAGTTCGACGACTTGATCGTGCCAAGGTTCTTTTGGTTCGATTTTTTGTTTGCG 423499
Query 111356 GCATCCTTGTAGAGCATGTAGGGCGTCCCCGTCTCCGTCTGTGATTTGAGAATAGCCTTC 111415
|| ||||||||||||||| | || | || || || ||| | || ||||| || | |
Sbjct 423500 GCGTCCTTGTAGAGCATGAACGGGTTGCCGGTTTCGACCTGGGCTTCAAGAATCGCGTAC 423559
Query 111416 CAAA-CATCGGCGGCTGGTACAATGGCGTTGGCCCGTCCCTCCGCCTCGTACTTTGTGTA 111474
|||| | | ||| | || | | ||||| || |||||| ||||| || | |
Sbjct 423560 CAAAGCTTTTGCG-CGGGGATCGTCTTCTTGGCGCGGCCCTCCTTTTCGTATTTCTCGAA 423618
Query 111475 GAGGGCTTCAAACTCCTCACCCACCGCGTCGGAGAGACCTGGTGCCTTGTCTGGACAGAA 111534
| ||| ||||| || || | ||| ||| || || || | | || |||||
Sbjct 423619 CAAGGCGCGGAACTCTTCGCCATAGACTTCGTGGAGGCCGGGGGCTTCAGCGGGGCAGAA 423678
Query 111535 AAGAGACCATTGACCACCTTCCTCAACCCGCTTCATGAAAAGGTCTGGAATCCACAGGGA 111594
|| | ||| | | | |||| || |||| ||| || || || |||||||| || |
Sbjct 423679 GAGGGGCCACTCGCTGGCGGCCTCGACACGCTCCATAAACAGATCGGGAATCCAGAGCGC 423738
Query 111595 TGAAAAGAGATCTCTACACCGAGCCTCTTCGTCACCTTGGTTGAGTCGTAACTCAAGGAA 111654
| |||||||| | | || |||| || | || ||||| || | || |||||
Sbjct 423739 AAAGAAGAGATCACGAGCGCGGACCTCCTCCTTGCCGTGGTTCTTGCGAAGGTCCAGGAA 423798
Query 111655 CTCCATGATATCCGCGTGCCATGGCTCAAGATAGACTGCGATAGATCCCTTTCGACGC-- 111712
||| | || || |||||||||||||| || |||| |||| | ||| |||||
Sbjct 423799 CTCGAAGACGTCAGCGTGCCATGGCTCGAGGTAGATCGCGAAGGCTCCGG---GACGCTT 423855
Query 111713 ----CCAGCTTGATTTACATAGCGCGCTGTGGCGTTAAATACGCGAAGCATTGGAATAAT 111768
||| |||| | || |||||||| ||| ||| | || || ||||| || | ||
Sbjct 423856 GTTGCCACCTTGGTCGACGTAGCGCGCGGTGTTGTTGTAGACACGGAGCATGGGGACGAT 423915
Query 111769 ACCATCTGATTGACCATTTGTCCCCCGAATACGAGATTTATTGGCTCTCACATCATGGAT 111828
|| | || | || || || || || ||| | || | | | |||||
Sbjct 423916 GCCGTTCGAGTAGCCGTTCGTGCCGGCGATGTAAGAGCCGGTCGCGCGGATGTTGTGGAT 423975
Query 111829 GTGCATCCCAATACCCCCAGCCCACTTTGAGATTTGCGCACACTCCGTAAGAGTTCCATA 111888
| || || ||||| || || ||| ||||| |||| ||| | | || || | ||
Sbjct 423976 GCTCAAACCGATACCACCGGCGGTCTTGGAGATGAGCGCGCACGTCTTGAGCGTGTCGTA 424035
Query 111889 GATACCGTTGATTGAGTCCTCCTTGTTGGCGATAAGGAAGCAACTGGACATCTGCGGTCT 111948
||| || | ||| ||||| ||||| ||| || ||||| || || | ||||||
Sbjct 424036 GATGCCTTCGATCGAGTCGTCCTTCATGGTGACCAGGAAACACGACGAAAGCTGCGGGTG 424095
Query 111949 TGGTGTACCAGCATTGAAGAGGGTTGGTGTTGCGTGAATGAACATACCTTGGGACATCTT 112008
|| || || || |||||||| || || | ||||| | || | | ||||||
Sbjct 424096 AGGCGTTCCGGCGTTGAAGAGCGTCGGCGAGGCGTGGGTAAAGTAGCGCTCGGACATGAG 424155
Query 112009 GTCGTATGTCTCCAAGACAGAATCAATGTCTTCCCCGTGGATGCCGATTGCGACCCGCAT 112068
|| ||| | || |||||| || ||||| | ||||||||||||| ||||| |||||
Sbjct 424156 GTTGTACGACTGCAAGACGCGCTCGATGTCGTGACCGTGGATGCCGACGGCGACGCGCAT 424215
Query 112069 GAACATGTACTGTGGG 112084
|| ||||| || |||
Sbjct 424216 GAGCATGTGTTGCGGG 424231
>seq34
Length=727289
Score = 158 bits (174), Expect = 2e-33
Identities = 273/394 (69%), Gaps = 2/394 (1%)
Strand=Plus/Plus
Query 9155 CCGCATCTATCAAGCCTCTTCCTCAGAGATGTTTGGTAAGGTTAAGGAGTCACCACAAAA 9214
|||| | || |||||||| |||| ||| ||| || ||||| || | || |||
Sbjct 66185 CCGCTTTTACCAAGCCTCGACCTCCGAGTTGTACGGCAAGGTCGTCGAAACCCCTCAATC 66244
Query 9215 CGAGGAGACACCCTTCTACCCACGCTCGGTCTACGGAGTCTCAAAGGTTGCGGCACATTG 9274
|||| ||||||||||||||| || ||| ||||||||| | ||| | || ||
Sbjct 66245 CGAGACGACACCCTTCTACCCTCGTTCGCCTTACGGAGTCGCCAAGTTGTACGCCTTCTG 66304
Query 9275 GCTCGTCAAAAATTACCGCGAGTCTTACGGACTGTTTGCGTGCTCCGGAATCCTCTTCAA 9334
| ||||||| || ||||||||||| |||| ||| || ||| ||| ||| | |||||
Sbjct 66305 GATCGTCAAGAACTACCGCGAGTCGTACGACATGTACGCCTGCAACGGCATCTTGTTCAA 66364
Query 9335 CCATGAATCACCGAGACGAGGT-GCAGACTTTGTGACCATGAAGATTACCGAGGGTATCA 9393
||| || || ||| | || ||| ||| |||||| || | ||||||| || | | ||
Sbjct 66365 CCACGAGTCCCCGCGTCGTGGTCGCA-CCTTTGTCACGAGGAAGATTTCCCGAGCTGTCG 66423
Query 9394 AACAAATCATGAAGGGTGAAAAGGAGTTCATTGAATTGGGTAACATAAACGCGGAGAGAG 9453
| ||| | ||| || |||| | | || | | || ||||| | || || | |
Sbjct 66424 CCGAGATCTCGCTCGGTCAACAGGACTGCCTTTACCTCGGCAACATGGAGGCCAAGCGTG 66483
Query 9454 ATTGGGGTCACGCGAAGGACTATGTTGAAGCTATGTGGCTCATGCTTCAACAAGAGGAAG 9513
||||||| |||||| ||||| || || | ||||||| | ||||| || |||||
Sbjct 66484 ATTGGGGACACGCGCGCGACTACGTCGAGGGTATGTGGATGATGCTGCAGCAAGACACCC 66543
Query 9514 CCGACGAATATGTAGTAGCAACGGGTGAGACCCA 9547
||||||| | ||| | || ||||||||||||||
Sbjct 66544 CCGACGACTTTGTCCTCGCGACGGGTGAGACCCA 66577
>seq45
Length=1665130
Score = 125 bits (138), Expect = 9e-24
Identities = 165/226 (73%), Gaps = 2/226 (1%)
Strand=Plus/Minus
Query 9155 CCGCATCTATCAAGCCTCTTCCTCAGAGATGTTTGGTAAGGTTAAGGAGTCACCACAAAA 9214
|||| |||| |||||||| |||| ||| ||| || ||||| ||| | || ||
Sbjct 833015 CCGCTTCTACCAAGCCTCGACCTCGGAGTTGTACGGCAAGGTCGTCGAGACCCCTCAGTC 832956
Query 9215 CGAGGAGACACCCTTCTACCCACGCTCGGTCTACGGAGTCTCAAAGGTTGCGGCACATTG 9274
|||| ||| ||||||||||| |||||| |||||||||| | ||| | || ||
Sbjct 832955 CGAGACGACCCCCTTCTACCCTCGCTCGCCCTACGGAGTCGCCAAGCTGTACGCCTTCTG 832896
Query 9275 GCTCGTCAAAAATTACCGCGAGTCTTACGGACTGTTTGCGTGCTCCGGAATCCTCTTCAA 9334
| ||||||| || ||||||||||| ||||| ||| |||||| ||| |||||||||||
Sbjct 832895 GATCGTCAAGAACTACCGCGAGTCGTACGGCATGTACGCGTGCAACGGTATCCTCTTCAA 832836
Query 9335 CCATGAATCACCGAGACGAGG-TGCAGACTTTGTGACCATGAAGAT 9379
||| || || || | || || ||| |||||| |||| |||||
Sbjct 832835 CCACGAGTCCCCCCGCCGTGGCCGCA-CCTTTGTCACCAGAAAGAT 832791
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 628031434771200
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |