Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Microbotryum_20saponariae_20[genbank_20GCA_5F900015475.1_202016-12-
23] 72 sequences; 28,653,577 total letters
Query= NC_028092.1
Length=193301
Score E
Sequences producing significant alignments: (Bits) Value
seq41 201 1e-46
seq45 84.2 3e-11
>seq41
Length=447122
Score = 201 bits (222), Expect = 1e-46
Identities = 567/860 (66%), Gaps = 12/860 (1%)
Strand=Plus/Plus
Query 118710 GCGATTGACGCCAGATTACACACAGAGGTCTCATCCTTATCAGTGTACTCTATAATTTCC 118769
||||| || |||| || || || | | |||||| | | |||||| || || ||
Sbjct 423380 GCGATCGAGGCCAAGTTGCAGACGGCGCACTCATCGGGCGCCGAGTACTCGATGATCTCG 423439
Query 118770 GTGCACAAGTTTGAACTCTTAATGGTGCCCAAGTTCTTTTGATTTGACTTTGTGTTACAC 118829
||||||||||| || ||| || ||||| | ||||||||| || || ||| ||||
Sbjct 423440 GTGCACAAGTTCGACGACTTGATCGTGCCAAGGTTCTTTTGGTTCGATTTTTTGTTTGCG 423499
Query 118830 GCATCCTTGTAAAGCATGTATGGCGTCCCCGTCTCCGTTTGGGACTTGAGAATAGCCTTC 118889
|| |||||||| |||||| | || | || || || |||| | ||||| || | |
Sbjct 423500 GCGTCCTTGTAGAGCATGAACGGGTTGCCGGTTTCGACCTGGGCTTCAAGAATCGCGTAC 423559
Query 118890 CAGA-CATCGGCAGCTGGCACAGTGGCGTTGGCTCGCCCCTCTTCCTCGTACTTTGTGTA 118948
|| | | | || || || | || ||||| || ||||| | ||||| || | |
Sbjct 423560 CAAAGCTTTTGC-GCGGGGATCGTCTTCTTGGCGCGGCCCTCCTTTTCGTATTTCTCGAA 423618
Query 118949 GAGGGCTTCAAACTCTTCACCCACGGCCTCTGAGAGCCCTGGTGCCTTATCTGGGCAGAA 119008
| ||| |||||||| || | | || ||| || || || | | | ||||||||
Sbjct 423619 CAAGGCGCGGAACTCTTCGCCATAGACTTCGTGGAGGCCGGGGGCTTCAGCGGGGCAGAA 423678
Query 119009 GAGAGACCATTGACCACCCTCCTCAACCCGCTTCATGAAGAGGTCTGGGATCCAGAGCGC 119068
||| | ||| | | | |||| || |||| ||| || || || || |||||||||||
Sbjct 423679 GAGGGGCCACTCGCTGGCGGCCTCGACACGCTCCATAAACAGATCGGGAATCCAGAGCGC 423738
Query 119069 CGAGAAGAGATCCCGACAGCGAGCTTCTTCATCCCCCTGATTGAGACGCAACTCCAAAAA 119128
|||||||||| ||| ||| | || || | || || || || | |||| ||
Sbjct 423739 AAAGAAGAGATCACGAGCGCGGACCTCCTCCTTGCCGTGGTTCTTGCGAAGGTCCAGGAA 423798
Query 119129 GTCCATGATATCCGCGTGCCACGGTTCCAGGTACACCGCGATTGACCCCTTACGACGA-- 119186
|| | || || |||||||| || || ||||| | ||||| | || |||
Sbjct 423799 CTCGAAGACGTCAGCGTGCCATGGCTCGAGGTAGATCGCGAAGGCTCCGGGACGCTTGTT 423858
Query 119187 -CCAGCCTGGTTTACATACCTCGCAGTGGCGTTAAATACACGAAGCATTGGAATGATACC 119245
||| | |||| || || | ||| ||| ||| | ||||| ||||| || | ||| ||
Sbjct 423859 GCCACCTTGGTCGACGTAGCGCGCGGTGTTGTTGTAGACACGGAGCATGGGGACGATGCC 423918
Query 119246 ATCGGATTGGCCATTTGTCCCC-CGAA-TACGAGACTTATTGGCTCTGACATCGTGGATG 119303
| || | ||| || || || ||| || ||| | | || | || | |||||||
Sbjct 423919 GTTCGAGTAGCCGTTCGTGCCGGCGATGTAAGAGCCGG--TCGCGCGGATGTTGTGGATG 423976
Query 119304 TGCATACCAATACCCCCTGCCCACTTTGAGATTTGCGCGCACTCCGTGAGACTGCCGTAG 119363
|| ||| ||||| || || ||| ||||| |||||||| | |||| || |||||
Sbjct 423977 CTCAAACCGATACCACCGGCGGTCTTGGAGATGAGCGCGCACGTCTTGAGCGTGTCGTAG 424036
Query 119364 ATCCCATCGATCGAGTCACCCTTATTTGCGATGAGGAAGCAGCTCGACATTTGAGGCCTG 119423
|| || ||||||||||| |||| | | || ||||| || ||| | || ||
Sbjct 424037 ATGCCTTCGATCGAGTCGTCCTTCATGGTGACCAGGAAACACGACGAAAGCTGCGGGTGA 424096
Query 119424 GGTGTACCAGCGTTGAAGAGAGTTGGTGTCGCGTGGATGAACATACCTTGGGACATCTTG 119483
|| || || ||||||||||| || || | |||||| | || | | |||||| |
Sbjct 424097 GGCGTTCCGGCGTTGAAGAGCGTCGGCGAGGCGTGGGTAAAGTAGCGCTCGGACATGAGG 424156
Query 119484 TCGTAGGTCTCCAAGACG-GCGGGAATGTCTTCCCCGTGAATACCGATCGAGACCCGCAT 119542
| ||| | || ||||||| || | ||||| | ||||| || |||| | ||| |||||
Sbjct 424157 TTGTACGACTGCAAGACGCGCTCG-ATGTCGTGACCGTGGATGCCGACGGCGACGCGCAT 424215
Query 119543 AAACATGTATTG-GGGTGTT 119561
| ||||| ||| ||| |||
Sbjct 424216 GAGCATGTGTTGCGGGCGTT 424235
>seq45
Length=1665130
Score = 84.2 bits (92), Expect = 3e-11
Identities = 136/196 (69%), Gaps = 0/196 (0%)
Strand=Plus/Minus
Query 11802 TATCAAGCATCTTCCTCGGAGATGTTTGGTAAAGTTAGGGAATCCCCACAAAATGAGGAG 11861
|| ||||| || |||||||| ||| || || || || |||| || ||| |
Sbjct 833008 TACCAAGCCTCGACCTCGGAGTTGTACGGCAAGGTCGTCGAGACCCCTCAGTCCGAGACG 832949
Query 11862 ACGCCCTTCTATCCACGATCCGTCTATGGCGTCTCAAAGGTTGCGGCACATTGGCTCGTG 11921
|| |||||||| || || || ||| || ||| | ||| | || ||| ||||
Sbjct 832948 ACCCCCTTCTACCCTCGCTCGCCCTACGGAGTCGCCAAGCTGTACGCCTTCTGGATCGTC 832889
Query 11922 AAGAATTACCGAGAATCCTATGGTCTCTTTGCGTGCTCTGGTATTCTCTTCAACCACGAG 11981
||||| ||||| || || || || | | |||||| ||||| |||||||||||||||
Sbjct 832888 AAGAACTACCGCGAGTCGTACGGCATGTACGCGTGCAACGGTATCCTCTTCAACCACGAG 832829
Query 11982 TCACCCCGTCGTGGCC 11997
|| ||||| |||||||
Sbjct 832828 TCCCCCCGCCGTGGCC 832813
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 618434643408320
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |