Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Microbotryum_20saponariae_20[genbank_20GCA_5F900015475.1_202016-12-
23] 72 sequences; 28,653,577 total letters
Query= NC_028093.1
Length=182309
Score E
Sequences producing significant alignments: (Bits) Value
seq34 170 2e-37
seq45 129 7e-25
seq41 129 7e-25
seq36 113 5e-20
>seq34
Length=727289
Score = 170 bits (188), Expect = 2e-37
Identities = 275/393 (70%), Gaps = 2/393 (1%)
Strand=Plus/Plus
Query 7232 CGCGTATACCAAGCCTCAACTTCGGAGATGTTTGGTAAAGTCCGAGAAACTCCACAAAAC 7291
||| | ||||||||||| || || ||| ||| || || ||| ||||| || ||| |
Sbjct 66186 CGCTTTTACCAAGCCTCGACCTCCGAGTTGTACGGCAAGGTCGTCGAAACCCCTCAATCC 66245
Query 7292 GAGGAGACACCCTTCTACCCACGCTCGGTCTACGGAGTCTCAAAGGTTGCGGCACATTGG 7351
||| ||||||||||||||| || ||| ||||||||| | ||| | || |||
Sbjct 66246 GAGACGACACCCTTCTACCCTCGTTCGCCTTACGGAGTCGCCAAGTTGTACGCCTTCTGG 66305
Query 7352 CTCGTCAAAAATTACCGCGAGTCTTACGGACTGTTTGCGTGCTCCGGAATCCTCTTCAAC 7411
||||||| || ||||||||||| |||| ||| || ||| ||| ||| | ||||||
Sbjct 66306 ATCGTCAAGAACTACCGCGAGTCGTACGACATGTACGCCTGCAACGGCATCTTGTTCAAC 66365
Query 7412 CATGAATCACCGAGACGAGGT-GCAGACTTTGTCACAAAGAAGATTACCGAGGGTATCAA 7470
|| || || ||| | || ||| ||| ||||||||| | ||||||| || | | ||
Sbjct 66366 CACGAGTCCCCGCGTCGTGGTCGCA-CCTTTGTCACGAGGAAGATTTCCCGAGCTGTCGC 66424
Query 7471 ACAAATCATGAAGGGTGAAAAGGAGTTCATTGAATTGGGTAACATAAACGCGGCGAGAGA 7530
| ||| | ||| || |||| | | || | | || ||||| | || | | ||
Sbjct 66425 CGAGATCTCGCTCGGTCAACAGGACTGCCTTTACCTCGGCAACATGGAGGCCAAGCGTGA 66484
Query 7531 TTGGGGTCACGCGAAGGACTATGTTGAAGCTATGTGGCTCATGCTTCAACAAGAGGAAGC 7590
|||||| |||||| ||||| || || | ||||||| | ||||| || ||||| |
Sbjct 66485 TTGGGGACACGCGCGCGACTACGTCGAGGGTATGTGGATGATGCTGCAGCAAGACACCCC 66544
Query 7591 CGACGAATATGTAGTAGCAACGGGTGAGACCCA 7623
|||||| | ||| | || ||||||||||||||
Sbjct 66545 CGACGACTTTGTCCTCGCGACGGGTGAGACCCA 66577
>seq45
Length=1665130
Score = 129 bits (142), Expect = 7e-25
Identities = 165/225 (73%), Gaps = 2/225 (1%)
Strand=Plus/Minus
Query 7232 CGCGTATACCAAGCCTCAACTTCGGAGATGTTTGGTAAAGTCCGAGAAACTCCACAAAAC 7291
||| | ||||||||||| || |||||| ||| || || ||| || || || || |
Sbjct 833014 CGCTTCTACCAAGCCTCGACCTCGGAGTTGTACGGCAAGGTCGTCGAGACCCCTCAGTCC 832955
Query 7292 GAGGAGACACCCTTCTACCCACGCTCGGTCTACGGAGTCTCAAAGGTTGCGGCACATTGG 7351
||| ||| ||||||||||| |||||| |||||||||| | ||| | || |||
Sbjct 832954 GAGACGACCCCCTTCTACCCTCGCTCGCCCTACGGAGTCGCCAAGCTGTACGCCTTCTGG 832895
Query 7352 CTCGTCAAAAATTACCGCGAGTCTTACGGACTGTTTGCGTGCTCCGGAATCCTCTTCAAC 7411
||||||| || ||||||||||| ||||| ||| |||||| ||| ||||||||||||
Sbjct 832894 ATCGTCAAGAACTACCGCGAGTCGTACGGCATGTACGCGTGCAACGGTATCCTCTTCAAC 832835
Query 7412 CATGAATCACCGAGACGAGG-TGCAGACTTTGTCACAAAGAAGAT 7455
|| || || || | || || ||| ||||||||| | |||||
Sbjct 832834 CACGAGTCCCCCCGCCGTGGCCGCA-CCTTTGTCACCAGAAAGAT 832791
>seq41
Length=447122
Score = 129 bits (142), Expect = 7e-25
Identities = 500/781 (64%), Gaps = 15/781 (2%)
Strand=Plus/Minus
Query 104221 CCCACAGTACATGTTCATGCGCGTGGCCATCGGTATTCATGGGGAAGACATTGATTCTGT 104280
||| || ||||| |||||||||| ||| |||| || || || | ||||| || ||
Sbjct 424231 CCCGCAACACATGCTCATGCGCGTCGCCGTCGGCATCCACGGTCACGACATCGAGCGCGT 424172
Query 104281 CTTGGAGACATACGACAAGATGTCCCAAGGTATGTTCATTCACGCAACACCAACCCTCTT 104340
|||| || | ||| || |||||| | | || | ||||| | || || |||||
Sbjct 424171 CTTGCAGTCGTACAACCTCATGTCCGAGCGCTACTTTACCCACGCCTCGCCGACGCTCTT 424112
Query 104341 CAATGCTGGTACACCAAGACCCCAAATGTCCAGTTGCTTCCTTATCGCCAACAAGGAGGA 104400
||| || || || || || || | || || ||||| || ||| ||||| ||
Sbjct 424111 CAACGCCGGAACGCCTCACCCGCAGCTTTCGTCGTGTTTCCTGGTCACCATGAAGGACGA 424052
Query 104401 CTCAATCAACGGTATCTATGGAACTCTTACGGAGTGTGCGCAAATCTCAAAGTGGGCTGG 104460
||| ||| | || ||||| | || || | | ||| |||| ||||| ||| || ||
Sbjct 424051 CTCGATCGAAGGCATCTACGACACGCTCAAGACGTGCGCGCTCATCTCCAAGACCGCCGG 423992
Query 104461 GGGTATTGGGATGCACATCCATGATGTGAGAGCCAATAAATCTCGTATTCGGGGGACAAA 104520
||||| || || |||||| | | | || | ||| || || || ||
Sbjct 423991 TGGTATCGGTTTGAGCATCCACAACATCCGCGCGACCGGCTCTTACATCGCCGGCACGAA 423932
Query 104521 TGGTCAATCAGATGGTATTATTCCAATGCTTCGCGTATTTAACGCCACAGCGCGCTATGT 104580
|| | || | || || | || ||||| || || | ||| ||| |||||||| ||
Sbjct 423931 CGGCTACTCGAACGGCATCGTCCCCATGCTCCGTGTCTACAACAACACCGCGCGCTACGT 423872
Query 104581 AAATCAAGCTGG------GCGTCGAAAGGGATCTATCGCAGTCTATCTTGAGCCATGGCA 104634
| |||| ||| ||||| ||| | |||| |||| || |||||||||||
Sbjct 423871 CGACCAAGGTGGCAACAAGCGTCCC---GGAGCCTTCGCGATCTACCTCGAGCCATGGCA 423815
Query 104635 CGCGGATATCATGGAGTTCCTTGAGTTGCGTCTCAACCAAGGTGACGAGGAGG--CGCGG 104692
||| || || | |||||||| || | || ||||| || | ||||||| ||||
Sbjct 423814 CGCTGACGTCTTCGAGTTCCTGGACCTTCGCAAGAACCACGGCAAGGAGGAGGTCCGCGC 423755
Query 104693 TGCCGCGATCTCTTCTCCGCTCTCTGGATTCCAGATCTCTTCATGAAGAGAGTTGAGGAG 104752
| || |||||||||| || ||||||||||| ||||| || ||| || | || ||||
Sbjct 423754 T--CGTGATCTCTTCTTTGCGCTCTGGATTCCCGATCTGTTTATGGAGCGTGTCGAGGCC 423697
Query 104753 AGTGGCAATTGGTCTCTCTTTTGTCCAGACAAGGCACCTGGTCTCTCCGATGCCGTGGGT 104812
|| | ||| | ||||| || || | | || || || ||| ||| | | ||
Sbjct 423696 GCCAGCGAGTGGCCCCTCTTCTGCCCCGCTGAAGCCCCCGGCCTCCACGAAGTCTATGGC 423637
Query 104813 GAGGAGTTTGAAGCCCTTTACACAAAGTACGAGGAAGAAGGTCGGGCGACTGCGACGGTG 104872
|| ||||| ||| | | | || ||||| | || || || || | |||| |
Sbjct 423636 GAAGAGTTCCGCGCCTTGTTCGAGAAATACGAAAAGGAGGGCCGCGCCAAGAAGACGATC 423577
Query 104873 CCAGCTGCCGATG-TGTGGAAAGCTATTCTCAAGTCTCAAACCGAGACTGGTACACCATA 104931
|| || || | | | ||| | || ||||| | | || ||| || || | || |
Sbjct 423576 CCCGC-GCAAAAGCTTTGGTACGCGATTCTTGAAGCCCAGGTCGAAACCGGCAACCCGTT 423518
Query 104932 CATGCTTTACAAAGACGCCTGTAACCAAAAGAGTAATCAAAAGAATTTGGGTGTGATCAA 104991
|||||| ||||| |||||| ||| |||| || |||||||| | || ||||||
Sbjct 423517 CATGCTCTACAAGGACGCCGCAAACAAAAAATCGAACCAAAAGAACCTTGGCACGATCAA 423458
Query 104992 G 104992
|
Sbjct 423457 G 423457
>seq36
Length=1841281
Score = 113 bits (124), Expect = 5e-20
Identities = 207/299 (69%), Gaps = 6/299 (2%)
Strand=Plus/Minus
Query 169160 TTGAGAATGAGACCCTTGATGTGGGAACCGTCGTTATCGGCATCCGTCATGATCATGAGA 169219
|||| || |||||||||||||| || || |||| ||| ||| | ||||||||||||
Sbjct 672286 TTGATGATCAGACCCTTGATGTGCGATCCATCGTGATCCTGATCGGCCATGATCATGAGC 672227
Query 169220 CGACCATACCGAAGCTCGGAAACATCTTGATAGTCCTTACCCTGTTGAAGACCCAAGATC 169279
|| || || ||| | || || ||| | || ||||| || | |||||||||
Sbjct 672226 TTGCCGTAACGGAGCGAGTCGACGTCGGTGTAGACTTTGCCCTGCTGCAAGCCCAAGATC 672167
Query 169280 TTCTTGAGATCG-TTGAACTCTTGGTTTGATGT--GAGCTGTGTGACAGAGGCATCGCGA 169336
| ||||| ||| ||||| ||| | | || ||| | || | | || || ||
Sbjct 672166 TGCTTGA--TCGCTTGAA-TCTCGACATTATCGAGGAGGGCTTTGCCCGCCGCTTCACGC 672110
Query 169337 ACATTCTTACACTTCCCACGAAGAGGGAAGACACCGTAGTGATCACGACCAACGACGGAG 169396
|| || |||| || || | |||||||||||| |||| || ||||| |||||||
Sbjct 672109 ACGTTGAGCAACTTTCCTCGCAAAGGGAAGACACCATAGTTGTCTCGACCGACGACGGCC 672050
Query 169397 AGACCCGCGACTGCGAGAGTCTTCGCCGAGTCACCCTCGGTGACGATGAGCGTACATTT 169455
||||||| || ||||| | ||| || || || || ||||| | ||||||||| || ||
Sbjct 672049 AGACCCGACACGGCGAGCGCCTTGGCGGAATCTCCTTCGGTCAAGATGAGCGTGCACTT 671991
Score = 82.4 bits (90), Expect = 9e-11
Identities = 77/98 (79%), Gaps = 0/98 (0%)
Strand=Plus/Minus
Query 94846 TCTGGTTCCTTCTGCGCTATTTATTGGCTCAAGAAGCGAGGTCTCATGCCAGGTCTCTGC 94905
|| || |||||| | | || | ||||||||| || ||||| |||||||| || |||||
Sbjct 398467 TCAGGCTCCTTCGCCTCCATCTTTTGGCTCAAAAAACGAGGCCTCATGCCCGGCCTCTGT 398408
Query 94906 TTCTCCAACGAGCTTATCTCTCGTGACGAGGGACTCCA 94943
|||||||||||||| || || || ||||| || || ||
Sbjct 398407 TTCTCCAACGAGCTCATATCCCGCGACGAAGGTCTTCA 398370
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 583260275065280
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |