Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Microbotryum_20saponariae_20[genbank_20GCA_5F900015475.1_202016-12- 23] 72 sequences; 28,653,577 total letters Query= NC_028108.1 Length=171454 Score E Sequences producing significant alignments: (Bits) Value seq41 455 4e-123 seq45 91.5 2e-13 seq36 89.7 6e-13 >seq41 Length=447122 Score = 455 bits (504), Expect = 4e-123 Identities = 781/1125 (69%), Gaps = 10/1125 (1%) Strand=Plus/Minus Query 19116 TCATGCGAGTCGCGGTCGGCATCCATGGCGACGACCTCCCGCGAGTCCGCGAGACATACG 19175 ||||||| ||||| ||||||||||| || ||||| || ||| ||| || | ||| Sbjct 424217 TCATGCGCGTCGCCGTCGGCATCCACGGTCACGACATCGAGCGCGTCTTGCAGTCGTACA 424158 Query 19176 ACCTGATGAGCCAGAAGTTCTTCACGCACGCGACGCCGACCCTTTTCAACGCCGGTACGA 19235 |||| ||| | || | ||| || ||||| ||||||| || ||||||||||| ||| Sbjct 424157 ACCTCATGTCCGAGCGCTACTTTACCCACGCCTCGCCGACGCTCTTCAACGCCGGAACGC 424098 Query 19236 ACAACCCGCAGATGTCGAGCTGTTTCCTAGTGGCTATGAAGGATGACAGCATTGAGGGCA 19295 |||||||| | ||| |||||||| || | |||||||| ||| || || |||| Sbjct 424097 CTCACCCGCAGCTTTCGTCGTGTTTCCTGGTCACCATGAAGGACGACTCGATCGAAGGCA 424038 Query 19296 TCTACGAGACGCTCAAGGAGTGCGCGCACATCTCCAAGTGGTCCGGGGGTATCGGGATCC 19355 ||||||| ||||||||| |||||||| |||||||||| |||| |||||||| | Sbjct 424037 TCTACGACACGCTCAAGACGTGCGCGCTCATCTCCAAGACCGCCGGTGGTATCGGTTTGA 423978 Query 19356 ACTGCTCGAATATCCGGTCGAGTGGTACACGAATCAATGGGACGAACGGAGTAGCCGA-C 19414 | | || ||||| ||| || | ||| || |||||||| || ||| | Sbjct 423977 GCATCCACAACATCCGCGCGACCGGCTCTTACATCGCCGGCACGAACGGC-TACTCGAAC 423919 Query 19415 GGTATCGTCCCAATGCTCCGCGTCTTCAACAACACGGCCAGGTACGTCAACCAGGGGGGC 19474 || |||||||| |||||||| |||| ||||||||| || | |||||| |||| || ||| Sbjct 423918 GGCATCGTCCCCATGCTCCGTGTCTACAACAACACCGCGCGCTACGTCGACCAAGGTGGC 423859 Query 19475 GGCAAACGCAAGGGCTCGTTCGCCATCTACCTCGAGCCATGGCACGCGGACGTCATGGAT 19534 ||| || || | ||||| ||||||||||||||||||||||| |||||| | || Sbjct 423858 AACAAGCGTCCCGGAGCCTTCGCGATCTACCTCGAGCCATGGCACGCTGACGTCTTCGAG 423799 Query 19535 TTCCTCGAACTGCGCCTGAACCAGGGTGACGAGGAGATGCGCTGTCGCGACCTCTTCACG 19594 ||||| || || ||| |||||| || | |||||| | ||| ||| || |||||| Sbjct 423798 TTCCTGGACCTTCGCAAGAACCACGGCAAGGAGGAGGTCCGCGCTCGTGATCTCTTCTTT 423739 Query 19595 GCCTTGTGGATTCCGGACCTATTCATGGAGAAGGTTGAGAAGGACGAAGAATGGCACCTG 19654 || | |||||||| || || || |||||| || ||| | | || |||| ||| Sbjct 423738 GCGCTCTGGATTCCCGATCTGTTTATGGAGCGTGTCGAGGCCGCCAGCGAGTGGCCCCTC 423679 Query 19655 ATGTGCCCGCACGAATGCCCTGGCCTACCCGACGTCTACGGCGAGGCGTTCAATGAGTTG 19714 | ||||| ||| ||| ||||| | ||| ||||| ||||| | |||| | ||| Sbjct 423678 TTCTGCCCCGCTGAAGCCCCCGGCCTCCACGAAGTCTATGGCGAAGAGTTCCGCGCCTTG 423619 Query 19715 TACCGGACTTACGTAGCCCAGGGCCGGTTCAAGAAGGTGGTCCGGGCCCGGGACGTCTGG 19774 | | || |||| | ||||||| ||||||| | ||| || | | | ||| Sbjct 423618 TTCGAGAAATACGAAAAGGAGGGCCGCGCCAAGAAGACGATCCCCGCGCAAAAGCTTTGG 423559 Query 19775 GACCGCG-TCCTCAAAAGCCAGGTCGAGACCGGCACACCGTACATGTGCTACAAGGACGC 19833 || ||| | || || ||||||||| ||||||| |||| |||| |||||||||||| Sbjct 423558 TAC-GCGATTCTTGAAGCCCAGGTCGAAACCGGCAACCCGTTCATGCTCTACAAGGACGC 423500 Query 19834 CGCGAACGCCAAGTCAAATCAGAAGAACATCGGCGCGATCAAGTCGTCCAACCTGTGTAC 19893 ||| ||| || || || || |||||| | ||| ||||||||||||| ||| |||| || Sbjct 423499 CGCAAACAAAAAATCGAACCAAAAGAACCTTGGCACGATCAAGTCGTCGAACTTGTGCAC 423440 Query 19894 TGAAATCATGGAGGTTTCCAAGCCGGACGAGACTGCCGTGTGTAATCTGGCGTCCCTGTG 19953 || ||||| ||| || ||| || ||| ||||| || || |||| || | Sbjct 423439 CGAGATCATCGAGTACTCGGCGCCCGATGAGTGCGCCGTCTGCAACTTGGCCTCGATCGC 423380 Query 19954 CCTGCCGACTTTCGTCAAGGCCTCCTCCTTCGACTTTGCCAAATTGTACGAGGTGACCCG 20013 |||||| ||| ||||| | | | ||||||| || ||| ||||||| | Sbjct 423379 GTTGCCGAGCTTCATCAAGAACGGCGTGTACGACTTTAAGAAGTTGCACGAGGTCGTCAA 423320 Query 20014 GGTCGTCACGCGTAATCTGAATCGCGTCATCGATCGGAACTTTTA-CCCGAC--CGAGGC 20070 ||||||| | || |||| ||| ||||||| |||| || |||| | |||||| Sbjct 423319 GGTCGTCGCTTTCAACTTGAACCGCATCATCGACGTCAACTACTATCCCGTCATCGAGGC 423260 Query 20071 GGCGCGCAAGTCGAATATGCGCCACCGGCCGATCGCGATCGGCGTCCAGGGCCTGGCCGA 20130 | | || || || | |||||||| || |||| ||||| || || || || ||||| Sbjct 423259 GCAG---AACTCCAACTTCCGCCACCGCCCCATCGGCATCGGAGTGCAAGGTCTCGCCGA 423203 Query 20131 CGTTTTCATGATGCTCGGCCTCTCATTCGACGATCCCAAGGCGCGCGAGCTCAACAAGGG 20190 || |||||| | | | | | ||||| ||| |||||||| ||||||||||| Sbjct 423202 CGCGTTCATGGCGTTGGCGATGCCGTTCGATTCACCCGAGGCGCGCAAGCTCAACAAGCA 423143 Query 20191 CATCTTCGAGGCCGTGTACCACGCGGCCCTCCTGGAATCGTGCGA 20235 ||||||||| || | |||||||| || || | |||||||| Sbjct 423142 GATCTTCGAGACCATCTACCACGCCGCGATCGAGTCGTCGTGCGA 423098 Score = 448 bits (496), Expect = 5e-121 Identities = 793/1147 (69%), Gaps = 13/1147 (1%) Strand=Plus/Plus Query 78775 GACTCGAGCAGGGCCGCGTGGTACACAGCCTCGAAGATGCCCTTGTTGAGCTCGCGCGCC 78834 ||||||| | || |||||||| | | ||||||||| ||||||||||| ||||||| Sbjct 423107 GACTCGATC---GCGGCGTGGTAGATGGTCTCGAAGATCTGCTTGTTGAGCTTGCGCGCC 423163 Query 78835 TTGGTCTCGTCGAACGAAAGGCCGAGCATCATGAAGACATCGGCCAGGCCCTGGACGCCG 78894 | || ||||||| | | | | |||||| | ||||| || || || || ||| Sbjct 423164 TCGGGTGAATCGAACGGCATCGCCAACGCCATGAACGCGTCGGCGAGACCTTGCACTCCG 423223 Query 78895 ATAGCGATCGGTCGGTGGCGCATGTTGCTCTTTCGGGCCGCCTCGGT--CGGG-TAAAAG 78951 || |||| || |||||||| | |||| || | ||||||| | |||| || || Sbjct 423224 ATGCCGATGGGGCGGTGGCGGAAGTTGGAGTTCTG---CGCCTCGATGACGGGATAGTAG 423280 Query 78952 TTCCGATCGATGACGCGGTTCAGGTTACGCGTGACGACCCGAGTCACCTCGTACAATTTG 79011 || ||||||| |||||||| ||| | ||||||| ||||||| ||| || Sbjct 423281 TTGACGTCGATGATGCGGTTCAAGTTGAAAGCGACGACCTTGACGACCTCGTGCAACTTC 423340 Query 79012 GCGAAATCAAA-ATGATTTCCTTTGATGAAAGTCGGTAGGCACAGCGATGCCAGGTTGCA 79070 || || | | | | ||| |||||| |||| | | ||| |||| |||||| Sbjct 423341 TTAAAGTCGTACACGCCGTTCTT-GATGAAGCTCGGCAACGCGATCGAGGCCAAGTTGCA 423399 Query 79071 CACGGCCGTCTCGTCCGGGCTAGAAACCTCGATGATTTCTGTGCACAAATTAGACGACTT 79130 ||||| ||| || || || ||||||||| || |||||||| || |||||||| Sbjct 423400 GACGGCGCACTCATCGGGCGCCGAGTACTCGATGATCTCGGTGCACAAGTTCGACGACTT 423459 Query 79131 GATGGTGCCGATGTTCTTCTGGTTGCTCTTCTCGTTACAGGCGTCCTTGTAGCACATGTA 79190 ||| ||||| | |||||| ||||| || | ||| ||||||||||||| |||| | Sbjct 423460 GATCGTGCCAAGGTTCTTTTGGTTCGATTTTTTGTTTGCGGCGTCCTTGTAGAGCATGAA 423519 Query 79191 CGGCGTCCCGGTCTCAACCTGACTCTTGAGAACGCCGTCCCAGATGTCCCGGGCCCGGAC 79250 ||| | ||||| || ||||| | |||| ||| ||| | | | || ||| Sbjct 423520 CGGGTTGCCGGTTTCGACCTGGGCTTCAAGAATCGCGTACCAAAGCTTTTGCGCGGGGAT 423579 Query 79251 AACCTTCTTGTACCGACCCTGTGCGACGTACGTCCGGTACAACTCGTTGAAAGCCTCCCC 79310 ||||||| || |||| |||| || | |||| || ||| | || || Sbjct 423580 CGTCTTCTTGGCGCGGCCCTCCTTTTCGTATTTCTCGAACAAGGCGCGGAACTCTTCGCC 423639 Query 79311 ATAGACATCGGGCAGGCCCGGGCACTCGTGCGGGCACATCAGGTGCCAGTCCTCGTCCTT 79370 |||||| ||| | ||||| ||| || ||||| | ||| |||| || | | Sbjct 423640 ATAGACTTCGTGGAGGCCGGGGGCTTCAGCGGGGCAGAAGAGGGGCCACTCGCTGGCGGC 423699 Query 79371 CTCAACCTTCTCCATGAAGAGGTCCGGGATCCACAGGGCCGTGAAGAGGTCGCGGCAACG 79430 ||| || |||||| || || || || ||||| || || |||||| || || || Sbjct 423700 CTCGACACGCTCCATAAACAGATCGGGAATCCAGAGCGCAAAGAAGAGATCACGAGCGCG 423759 Query 79431 CATCTCCTCGTCGCCCTGGTTCAGACGCAGCTCGAGAAAGTCCATGATGTCGGCGTGCCA 79490 | |||||| | ||| |||||| || || || || || || | || ||| |||||||| Sbjct 423760 GACCTCCTCCTTGCCGTGGTTCTTGCGAAGGTCCAGGAACTCGAAGACGTCAGCGTGCCA 423819 Query 79491 CGGCTCCAGATAGATGGCGAACGAACCCTTGCGCTTGCCGCCGCCCTGGTTGACGTACCG 79550 ||||| || ||||| ||||| | || |||||| ||| || |||| |||||| || Sbjct 423820 TGGCTCGAGGTAGATCGCGAAGGCTCCGGGACGCTTGTTGCCACCTTGGTCGACGTAGCG 423879 Query 79551 GGCCGTGTTGTTGAAAACTCGGAGCATGGGCACGATGCCGTCGGCGACGCCGTTCGTCCC 79610 || ||||||||| | || ||||||||||| |||||||||| | | ||||||||| || Sbjct 423880 CGCGGTGTTGTTGTAGACACGGAGCATGGGGACGATGCCGTTCGAGTAGCCGTTCGTGCC 423939 Query 79611 GTTGATTCGTGTACCGCTCGCCCGAATGTTCGAGCAGTGGATTCCGATGCCCCCGGACCA 79670 | ||| | ||| |||| || ||||| | | | ||||| || |||| Sbjct 423940 GGCGATGTAAGAGCCGGTCGCGCGGATGTTGTGGATGCTCAAACCGATACCACCGGCGGT 423999 Query 79671 CTTGGAGATGTGCGCGCACTCCTTGAGCGTCTCGTAGATGCCCTCGATCGAGTCGTCCTT 79730 |||||||||| |||||||| ||||||||| ||||||||||| ||||||||||||||||| Sbjct 424000 CTTGGAGATGAGCGCGCACGTCTTGAGCGTGTCGTAGATGCCTTCGATCGAGTCGTCCTT 424059 Query 79731 CATAGCGACCAGGAAGCAGCTCGACATCTGTGGGTTGTTCGTACCGGCGTTGAAGAGGGT 79790 ||| | ||||||||| || ||| | ||| |||| ||| |||||||||||||| || Sbjct 424060 CATGGTGACCAGGAAACACGACGAAAGCTGCGGGTGAGGCGTTCCGGCGTTGAAGAGCGT 424119 Query 79791 CGGCGTCGCGTGCGTGAAGAACTTTTGGCTCATCAGATCGTACGTCTCCTTGACGCGCGG 79850 ||||| ||||| || ||| | | | ||| || | ||||| || | ||||||| Sbjct 424120 CGGCGAGGCGTGGGTAAAGTAGCGCTCGGACATGAGGTTGTACGACTGCAAGACGCGCTC 424179 Query 79851 GAGGTCGTCGCCGTGGATGCCGACCGCGACGCGCATGAAGAGGTACTG-GGGCGTCTCGC 79909 || ||||| |||||||||||||| ||||||||||||| | || || |||||| ||| Sbjct 424180 GATGTCGTGACCGTGGATGCCGACGGCGACGCGCATGAGCATGTGTTGCGGGCGT-TCGG 424238 Query 79910 CGACATT 79916 |||| || Sbjct 424239 CGACCTT 424245 Score = 149 bits (164), Expect = 7e-31 Identities = 157/207 (76%), Gaps = 0/207 (0%) Strand=Plus/Plus Query 78183 GGCGCGTGTTCGCAAATAGTACATGCCCGTCTTGAGACCCTTCTTCCATCCGTACAGGTG 78242 |||||| || ||||| ||||||||||||||||| || || |||||| ||||| | ||| Sbjct 422287 GGCGCGCGTGCGCAAGTAGTACATGCCCGTCTTCAGTCCTCGCTTCCAGCCGTAGAAGTG 422346 Query 78243 CATACTCGACAGCTTGGCCAGACTCGGGTTCTCCATGAAGATGTTGAGCGACTGGGACTG 78302 ||| || |||| |||| ||||| || || | |||||||||||| || ||||| Sbjct 422347 CATCGACGTGAGCTGTGCCATCGTCGGGCTCGACAAGTGGATGTTGAGCGATTGCGACTG 422406 Query 78303 GTCGATGTACGCACCGCGGTCGGCCGCCATGTCGATGACCGACTTTTGCGGAATCTCCCA 78362 ||||||| | || || || ||||||| || ||||| | | |||||||| | |||||| Sbjct 422407 GTCGATGAAGGCGCCTCGATCGGCCGACAGATCGATAATAGTCTTTTGCGAGAGCTCCCA 422466 Query 78363 GATGGTCCGGTAAATGGCCTTCAGCTC 78389 || |||| ||| |||||||| || || Sbjct 422467 GACGGTCTTGTAGATGGCCTTGAGATC 422493 Score = 134 bits (148), Expect = 2e-26 Identities = 152/204 (75%), Gaps = 0/204 (0%) Strand=Plus/Minus Query 20618 CTCAAGGACATTTACAGGACCGTATGGGAAATCCCACAGAAGAGCATCATCGACATGGCG 20677 ||||||| ||| |||| |||||| ||||| || | || |||| || ||||| || || Sbjct 422490 CTCAAGGCCATCTACAAGACCGTCTGGGAGCTCTCGCAAAAGACTATTATCGATCTGTCG 422431 Query 20678 GCCGATCGCGGCGCCTACATCGACCAGTCCCAGTCGCTCAATGTCTTCATGGAGAATCCG 20737 |||||||| ||||||| |||||||||||| || |||||||| || | || || ||| Sbjct 422430 GCCGATCGAGGCGCCTTCATCGACCAGTCGCAATCGCTCAACATCCACTTGTCGAGCCCG 422371 Query 20738 AGCCTGGCGAAGCTGAGCTCCATGCATATGTACGGCTGGCACAAGGGGCTCAAGACGGGC 20797 | |||| |||| | || ||||| | ||||||||| | || || ||||||||| Sbjct 422370 ACGATGGCACAGCTCACGTCGATGCACTTCTACGGCTGGAAGCGAGGACTGAAGACGGGC 422311 Query 20798 ATGTACTATCTGCGGACCCGAGCC 20821 |||||||| |||| || || ||| Sbjct 422310 ATGTACTACTTGCGCACGCGCGCC 422287 >seq45 Length=1665130 Score = 91.5 bits (100), Expect = 2e-13 Identities = 77/95 (81%), Gaps = 0/95 (0%) Strand=Plus/Minus Query 60024 GGCTCGTTCTGTGCTATTTTCTGGCTCAAAAAGCGTGGCCTCATGCCGGGCCTGAGTTTC 60083 |||||||| | | || ||||||||||| ||||||||| | ||||| || ||| ||| Sbjct 331125 GGCTCGTTTGCTTCCATCTTCTGGCTCAAGAAGCGTGGCTTGATGCCCGGATTGACCTTC 331066 Query 60084 TCCAACGAGCTGATTTCCCGGGACGAGGGCCTCCA 60118 ||||||||||| ||||| || ||||||||||| || Sbjct 331065 TCCAACGAGCTCATTTCGCGTGACGAGGGCCTTCA 331031 >seq36 Length=1841281 Score = 89.7 bits (98), Expect = 6e-13 Identities = 79/99 (80%), Gaps = 0/99 (0%) Strand=Plus/Minus Query 60021 TCTGGCTCGTTCTGTGCTATTTTCTGGCTCAAAAAGCGTGGCCTCATGCCGGGCCTGAGT 60080 || ||||| ||| | || || ||||||||||| || ||||||||||| ||||| || Sbjct 398467 TCAGGCTCCTTCGCCTCCATCTTTTGGCTCAAAAAACGAGGCCTCATGCCCGGCCTCTGT 398408 Query 60081 TTCTCCAACGAGCTGATTTCCCGGGACGAGGGCCTCCAT 60119 |||||||||||||| || ||||| ||||| || || ||| Sbjct 398407 TTCTCCAACGAGCTCATATCCCGCGACGAAGGTCTTCAT 398369 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 548524306327680