Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Microbotryum_20saponariae_20[genbank_20GCA_5F900015475.1_202016-12-
23] 72 sequences; 28,653,577 total letters
Query= NC_029692.1
Length=362276
Score E
Sequences producing significant alignments: (Bits) Value
seq36 168 2e-36
seq55 163 7e-35
seq20 161 2e-34
>seq36
Length=1841281
Score = 168 bits (186), Expect = 2e-36
Identities = 164/211 (78%), Gaps = 0/211 (0%)
Strand=Plus/Plus
Query 210903 AGGACAAGGTGAAGAGTGGACTCTTTTTGGATGTTATAATCCGCAAGGGTCCTTCCATCT 210962
|| || | ||| || || ||||| ||||||||||| |||||||| || || | |||||
Sbjct 1559703 AGCACCAAGTGGAGCGTCGACTCCTTTTGGATGTTGTAATCCGCGAGCGTGCGGCCATCC 1559762
Query 210963 TCCAGCTGCTTGCCTGCGAAGATAAGGCGTTGTTGGTCAGGAGGAACTCCTTCCTTGTCC 211022
|| ||||||||||| || ||||| || ||||| ||||| || || | ||||||||||||
Sbjct 1559763 TCGAGCTGCTTGCCGGCAAAGATGAGACGTTGCTGGTCGGGGGGGATGCCTTCCTTGTCC 1559822
Query 211023 TGGATCTTTTGTTTCACGTTTTCGATGGTGTCAGAGCTTTCAACCTCGAGAGTGATCGTC 211082
|||||||| || ||||| ||||| ||||| || || |||||||| ||||| |||
Sbjct 1559823 TGGATCTTGGTCTTGACGTTGTCGATCGTGTCGGACGACTCGACCTCGAGGGTGATGGTC 1559882
Query 211083 TTTCCCGTGAGAGTCTTTACAAACACCTGCA 211113
|| |||||||| ||||| || || | ||||
Sbjct 1559883 TTGCCCGTGAGGGTCTTGACGAAGATTTGCA 1559913
>seq55
Length=539833
Score = 163 bits (180), Expect = 7e-35
Identities = 158/203 (78%), Gaps = 0/203 (0%)
Strand=Plus/Minus
Query 210903 AGGACAAGGTGAAGAGTGGACTCTTTTTGGATGTTATAATCCGCAAGGGTCCTTCCATCT 210962
|| || | ||| || || ||||| ||||||||||| || || || | ||| | |||||
Sbjct 107516 AGCACCAAGTGGAGGGTCGACTCCTTTTGGATGTTGTAGTCGGCCAAGGTGCGGCCATCC 107457
Query 210963 TCCAGCTGCTTGCCTGCGAAGATAAGGCGTTGTTGGTCAGGAGGAACTCCTTCCTTGTCC 211022
|| ||||||||||| |||||||| || ||||| ||||| || || | |||||||||||
Sbjct 107456 TCGAGCTGCTTGCCGGCGAAGATGAGACGTTGCTGGTCTGGGGGGATGCCTTCCTTGTCT 107397
Query 211023 TGGATCTTTTGTTTCACGTTTTCGATGGTGTCAGAGCTTTCAACCTCGAGAGTGATCGTC 211082
|||||||| || ||||| ||||| ||||| || || |||||||| |||||||||
Sbjct 107396 TGGATCTTGGTCTTGACGTTGTCGATCGTGTCGGACGACTCGACCTCGAGGGTGATCGTC 107337
Query 211083 TTTCCCGTGAGAGTCTTTACAAA 211105
|| ||||| |||||||| || ||
Sbjct 107336 TTGCCCGTAAGAGTCTTGACGAA 107314
>seq20
Length=1456699
Score = 161 bits (178), Expect = 2e-34
Identities = 163/212 (77%), Gaps = 0/212 (0%)
Strand=Plus/Minus
Query 210903 AGGACAAGGTGAAGAGTGGACTCTTTTTGGATGTTATAATCCGCAAGGGTCCTTCCATCT 210962
|| || | ||| || || ||||| || |||||||| ||||| || || || | |||||
Sbjct 546993 AGCACCAAGTGCAGCGTCGACTCCTTCTGGATGTTGTAATCGGCGAGCGTACGGCCATCC 546934
Query 210963 TCCAGCTGCTTGCCTGCGAAGATAAGGCGTTGTTGGTCAGGAGGAACTCCTTCCTTGTCC 211022
|| ||||||||||| |||||||| || ||||||||||| || |||| || ||||| |||
Sbjct 546933 TCGAGCTGCTTGCCCGCGAAGATGAGACGTTGTTGGTCTGGGGGAATGCCCTCCTTATCC 546874
Query 211023 TGGATCTTTTGTTTCACGTTTTCGATGGTGTCAGAGCTTTCAACCTCGAGAGTGATCGTC 211082
|| ||||| || ||||| ||||| ||||| ||| |||||||| || |||||||||
Sbjct 546873 TGAATCTTAGCCTTTACGTTGTCGATCGTGTCCGAGGACTCAACCTCAAGCGTGATCGTC 546814
Query 211083 TTTCCCGTGAGAGTCTTTACAAACACCTGCAT 211114
|| || || | ||||| ||||| | |||||
Sbjct 546813 TTGCCGGTTAAGGTCTTGACAAAGATTTGCAT 546782
Score = 161 bits (178), Expect = 2e-34
Identities = 163/212 (77%), Gaps = 0/212 (0%)
Strand=Plus/Minus
Query 210903 AGGACAAGGTGAAGAGTGGACTCTTTTTGGATGTTATAATCCGCAAGGGTCCTTCCATCT 210962
|| || | ||| || || ||||| || |||||||| || || || || || | |||||
Sbjct 547221 AGCACCAAGTGCAGCGTCGACTCCTTCTGGATGTTGTAGTCGGCGAGCGTACGGCCATCC 547162
Query 210963 TCCAGCTGCTTGCCTGCGAAGATAAGGCGTTGTTGGTCAGGAGGAACTCCTTCCTTGTCC 211022
|| ||||||||||| |||||||| || ||||||||||| || |||| || |||||||||
Sbjct 547161 TCGAGCTGCTTGCCCGCGAAGATGAGACGTTGTTGGTCTGGGGGAATGCCCTCCTTGTCC 547102
Query 211023 TGGATCTTTTGTTTCACGTTTTCGATGGTGTCAGAGCTTTCAACCTCGAGAGTGATCGTC 211082
|| ||||| || ||||| ||||| ||||| ||| ||||||||||| |||||||||
Sbjct 547101 TGAATCTTGGCCTTGACGTTGTCGATCGTGTCCGAGGACTCAACCTCGAGCGTGATCGTC 547042
Query 211083 TTTCCCGTGAGAGTCTTTACAAACACCTGCAT 211114
|| || || | ||||| || || | |||||
Sbjct 547041 TTGCCTGTCAAGGTCTTGACGAAGATTTGCAT 547010
Score = 158 bits (174), Expect = 3e-33
Identities = 162/212 (76%), Gaps = 0/212 (0%)
Strand=Plus/Minus
Query 210903 AGGACAAGGTGAAGAGTGGACTCTTTTTGGATGTTATAATCCGCAAGGGTCCTTCCATCT 210962
|| || | ||| || || ||||| || || ||||| |||||||| || || | |||||
Sbjct 789372 AGCACCAAGTGGAGCGTCGACTCCTTCTGAATGTTGTAATCCGCGAGCGTGCGGCCATCC 789313
Query 210963 TCCAGCTGCTTGCCTGCGAAGATAAGGCGTTGTTGGTCAGGAGGAACTCCTTCCTTGTCC 211022
|| ||||||||||| || ||||| || ||||||||||| || |||| || ||||||||
Sbjct 789312 TCGAGCTGCTTGCCCGCAAAGATGAGACGTTGTTGGTCTGGGGGAATACCCTCCTTGTCT 789253
Query 211023 TGGATCTTTTGTTTCACGTTTTCGATGGTGTCAGAGCTTTCAACCTCGAGAGTGATCGTC 211082
|||||||| || || || || || ||||| ||| || |||||||| |||||||||
Sbjct 789252 TGGATCTTGGTCTTGACATTGTCAATCGTGTCCGAGGACTCGACCTCGAGGGTGATCGTC 789193
Query 211083 TTTCCCGTGAGAGTCTTTACAAACACCTGCAT 211114
|| ||||| || ||||| || || | |||||
Sbjct 789192 TTGCCCGTAAGCGTCTTGACGAAGATTTGCAT 789161
Score = 152 bits (168), Expect = 1e-31
Identities = 161/212 (76%), Gaps = 0/212 (0%)
Strand=Plus/Minus
Query 210903 AGGACAAGGTGAAGAGTGGACTCTTTTTGGATGTTATAATCCGCAAGGGTCCTTCCATCT 210962
|| || | ||| || || ||||| || || ||||| |||||||| || || | |||||
Sbjct 789600 AGCACCAAGTGGAGCGTCGACTCCTTCTGAATGTTGTAATCCGCGAGCGTGCGGCCATCC 789541
Query 210963 TCCAGCTGCTTGCCTGCGAAGATAAGGCGTTGTTGGTCAGGAGGAACTCCTTCCTTGTCC 211022
|| ||||||||||| |||||||| | || || ||||| || |||| |||||||||||
Sbjct 789540 TCGAGCTGCTTGCCCGCGAAGATCAATCGCTGCTGGTCTGGGGGAATGCCTTCCTTGTCT 789481
Query 211023 TGGATCTTTTGTTTCACGTTTTCGATGGTGTCAGAGCTTTCAACCTCGAGAGTGATCGTC 211082
|| ||||| || || || ||||| ||||| ||| || |||||||| |||||||||
Sbjct 789480 TGAATCTTGGTCTTGACATTGTCGATCGTGTCCGAGGACTCGACCTCGAGGGTGATCGTC 789421
Query 211083 TTTCCCGTGAGAGTCTTTACAAACACCTGCAT 211114
|| ||||| || ||||| || || | |||||
Sbjct 789420 TTGCCCGTAAGCGTCTTGACGAAGATTTGCAT 789389
Score = 143 bits (158), Expect = 6e-29
Identities = 159/212 (75%), Gaps = 0/212 (0%)
Strand=Plus/Minus
Query 210903 AGGACAAGGTGAAGAGTGGACTCTTTTTGGATGTTATAATCCGCAAGGGTCCTTCCATCT 210962
|| || | ||| || || ||||| || || ||||| |||||||| || || | |||||
Sbjct 789144 AGCACCAAGTGGAGCGTCGACTCCTTCTGAATGTTGTAATCCGCGAGCGTGCGGCCATCC 789085
Query 210963 TCCAGCTGCTTGCCTGCGAAGATAAGGCGTTGTTGGTCAGGAGGAACTCCTTCCTTGTCC 211022
|| ||||||||||| || ||||| || ||||||||||| || |||| || ||||||||
Sbjct 789084 TCGAGCTGCTTGCCCGCAAAGATGAGACGTTGTTGGTCTGGGGGAATACCCTCCTTGTCT 789025
Query 211023 TGGATCTTTTGTTTCACGTTTTCGATGGTGTCAGAGCTTTCAACCTCGAGAGTGATCGTC 211082
|||||||| || || || || || ||||| ||| || |||||||| ||||| |||
Sbjct 789024 TGGATCTTGGTCTTGACATTGTCAATCGTGTCCGAGGACTCGACCTCGAGGGTGATGGTC 788965
Query 211083 TTTCCCGTGAGAGTCTTTACAAACACCTGCAT 211114
|| || || | ||||| || || | |||||
Sbjct 788964 TTGCCGGTCAAGGTCTTGACGAAGATTTGCAT 788933
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 1159150930682280
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |