Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Microbotryum_20saponariae_20[genbank_20GCA_5F900015475.1_202016-12- 23] 72 sequences; 28,653,577 total letters Query= NC_029692.1 Length=362276 Score E Sequences producing significant alignments: (Bits) Value seq36 168 2e-36 seq55 163 7e-35 seq20 161 2e-34 >seq36 Length=1841281 Score = 168 bits (186), Expect = 2e-36 Identities = 164/211 (78%), Gaps = 0/211 (0%) Strand=Plus/Plus Query 210903 AGGACAAGGTGAAGAGTGGACTCTTTTTGGATGTTATAATCCGCAAGGGTCCTTCCATCT 210962 || || | ||| || || ||||| ||||||||||| |||||||| || || | ||||| Sbjct 1559703 AGCACCAAGTGGAGCGTCGACTCCTTTTGGATGTTGTAATCCGCGAGCGTGCGGCCATCC 1559762 Query 210963 TCCAGCTGCTTGCCTGCGAAGATAAGGCGTTGTTGGTCAGGAGGAACTCCTTCCTTGTCC 211022 || ||||||||||| || ||||| || ||||| ||||| || || | |||||||||||| Sbjct 1559763 TCGAGCTGCTTGCCGGCAAAGATGAGACGTTGCTGGTCGGGGGGGATGCCTTCCTTGTCC 1559822 Query 211023 TGGATCTTTTGTTTCACGTTTTCGATGGTGTCAGAGCTTTCAACCTCGAGAGTGATCGTC 211082 |||||||| || ||||| ||||| ||||| || || |||||||| ||||| ||| Sbjct 1559823 TGGATCTTGGTCTTGACGTTGTCGATCGTGTCGGACGACTCGACCTCGAGGGTGATGGTC 1559882 Query 211083 TTTCCCGTGAGAGTCTTTACAAACACCTGCA 211113 || |||||||| ||||| || || | |||| Sbjct 1559883 TTGCCCGTGAGGGTCTTGACGAAGATTTGCA 1559913 >seq55 Length=539833 Score = 163 bits (180), Expect = 7e-35 Identities = 158/203 (78%), Gaps = 0/203 (0%) Strand=Plus/Minus Query 210903 AGGACAAGGTGAAGAGTGGACTCTTTTTGGATGTTATAATCCGCAAGGGTCCTTCCATCT 210962 || || | ||| || || ||||| ||||||||||| || || || | ||| | ||||| Sbjct 107516 AGCACCAAGTGGAGGGTCGACTCCTTTTGGATGTTGTAGTCGGCCAAGGTGCGGCCATCC 107457 Query 210963 TCCAGCTGCTTGCCTGCGAAGATAAGGCGTTGTTGGTCAGGAGGAACTCCTTCCTTGTCC 211022 || ||||||||||| |||||||| || ||||| ||||| || || | ||||||||||| Sbjct 107456 TCGAGCTGCTTGCCGGCGAAGATGAGACGTTGCTGGTCTGGGGGGATGCCTTCCTTGTCT 107397 Query 211023 TGGATCTTTTGTTTCACGTTTTCGATGGTGTCAGAGCTTTCAACCTCGAGAGTGATCGTC 211082 |||||||| || ||||| ||||| ||||| || || |||||||| ||||||||| Sbjct 107396 TGGATCTTGGTCTTGACGTTGTCGATCGTGTCGGACGACTCGACCTCGAGGGTGATCGTC 107337 Query 211083 TTTCCCGTGAGAGTCTTTACAAA 211105 || ||||| |||||||| || || Sbjct 107336 TTGCCCGTAAGAGTCTTGACGAA 107314 >seq20 Length=1456699 Score = 161 bits (178), Expect = 2e-34 Identities = 163/212 (77%), Gaps = 0/212 (0%) Strand=Plus/Minus Query 210903 AGGACAAGGTGAAGAGTGGACTCTTTTTGGATGTTATAATCCGCAAGGGTCCTTCCATCT 210962 || || | ||| || || ||||| || |||||||| ||||| || || || | ||||| Sbjct 546993 AGCACCAAGTGCAGCGTCGACTCCTTCTGGATGTTGTAATCGGCGAGCGTACGGCCATCC 546934 Query 210963 TCCAGCTGCTTGCCTGCGAAGATAAGGCGTTGTTGGTCAGGAGGAACTCCTTCCTTGTCC 211022 || ||||||||||| |||||||| || ||||||||||| || |||| || ||||| ||| Sbjct 546933 TCGAGCTGCTTGCCCGCGAAGATGAGACGTTGTTGGTCTGGGGGAATGCCCTCCTTATCC 546874 Query 211023 TGGATCTTTTGTTTCACGTTTTCGATGGTGTCAGAGCTTTCAACCTCGAGAGTGATCGTC 211082 || ||||| || ||||| ||||| ||||| ||| |||||||| || ||||||||| Sbjct 546873 TGAATCTTAGCCTTTACGTTGTCGATCGTGTCCGAGGACTCAACCTCAAGCGTGATCGTC 546814 Query 211083 TTTCCCGTGAGAGTCTTTACAAACACCTGCAT 211114 || || || | ||||| ||||| | ||||| Sbjct 546813 TTGCCGGTTAAGGTCTTGACAAAGATTTGCAT 546782 Score = 161 bits (178), Expect = 2e-34 Identities = 163/212 (77%), Gaps = 0/212 (0%) Strand=Plus/Minus Query 210903 AGGACAAGGTGAAGAGTGGACTCTTTTTGGATGTTATAATCCGCAAGGGTCCTTCCATCT 210962 || || | ||| || || ||||| || |||||||| || || || || || | ||||| Sbjct 547221 AGCACCAAGTGCAGCGTCGACTCCTTCTGGATGTTGTAGTCGGCGAGCGTACGGCCATCC 547162 Query 210963 TCCAGCTGCTTGCCTGCGAAGATAAGGCGTTGTTGGTCAGGAGGAACTCCTTCCTTGTCC 211022 || ||||||||||| |||||||| || ||||||||||| || |||| || ||||||||| Sbjct 547161 TCGAGCTGCTTGCCCGCGAAGATGAGACGTTGTTGGTCTGGGGGAATGCCCTCCTTGTCC 547102 Query 211023 TGGATCTTTTGTTTCACGTTTTCGATGGTGTCAGAGCTTTCAACCTCGAGAGTGATCGTC 211082 || ||||| || ||||| ||||| ||||| ||| ||||||||||| ||||||||| Sbjct 547101 TGAATCTTGGCCTTGACGTTGTCGATCGTGTCCGAGGACTCAACCTCGAGCGTGATCGTC 547042 Query 211083 TTTCCCGTGAGAGTCTTTACAAACACCTGCAT 211114 || || || | ||||| || || | ||||| Sbjct 547041 TTGCCTGTCAAGGTCTTGACGAAGATTTGCAT 547010 Score = 158 bits (174), Expect = 3e-33 Identities = 162/212 (76%), Gaps = 0/212 (0%) Strand=Plus/Minus Query 210903 AGGACAAGGTGAAGAGTGGACTCTTTTTGGATGTTATAATCCGCAAGGGTCCTTCCATCT 210962 || || | ||| || || ||||| || || ||||| |||||||| || || | ||||| Sbjct 789372 AGCACCAAGTGGAGCGTCGACTCCTTCTGAATGTTGTAATCCGCGAGCGTGCGGCCATCC 789313 Query 210963 TCCAGCTGCTTGCCTGCGAAGATAAGGCGTTGTTGGTCAGGAGGAACTCCTTCCTTGTCC 211022 || ||||||||||| || ||||| || ||||||||||| || |||| || |||||||| Sbjct 789312 TCGAGCTGCTTGCCCGCAAAGATGAGACGTTGTTGGTCTGGGGGAATACCCTCCTTGTCT 789253 Query 211023 TGGATCTTTTGTTTCACGTTTTCGATGGTGTCAGAGCTTTCAACCTCGAGAGTGATCGTC 211082 |||||||| || || || || || ||||| ||| || |||||||| ||||||||| Sbjct 789252 TGGATCTTGGTCTTGACATTGTCAATCGTGTCCGAGGACTCGACCTCGAGGGTGATCGTC 789193 Query 211083 TTTCCCGTGAGAGTCTTTACAAACACCTGCAT 211114 || ||||| || ||||| || || | ||||| Sbjct 789192 TTGCCCGTAAGCGTCTTGACGAAGATTTGCAT 789161 Score = 152 bits (168), Expect = 1e-31 Identities = 161/212 (76%), Gaps = 0/212 (0%) Strand=Plus/Minus Query 210903 AGGACAAGGTGAAGAGTGGACTCTTTTTGGATGTTATAATCCGCAAGGGTCCTTCCATCT 210962 || || | ||| || || ||||| || || ||||| |||||||| || || | ||||| Sbjct 789600 AGCACCAAGTGGAGCGTCGACTCCTTCTGAATGTTGTAATCCGCGAGCGTGCGGCCATCC 789541 Query 210963 TCCAGCTGCTTGCCTGCGAAGATAAGGCGTTGTTGGTCAGGAGGAACTCCTTCCTTGTCC 211022 || ||||||||||| |||||||| | || || ||||| || |||| ||||||||||| Sbjct 789540 TCGAGCTGCTTGCCCGCGAAGATCAATCGCTGCTGGTCTGGGGGAATGCCTTCCTTGTCT 789481 Query 211023 TGGATCTTTTGTTTCACGTTTTCGATGGTGTCAGAGCTTTCAACCTCGAGAGTGATCGTC 211082 || ||||| || || || ||||| ||||| ||| || |||||||| ||||||||| Sbjct 789480 TGAATCTTGGTCTTGACATTGTCGATCGTGTCCGAGGACTCGACCTCGAGGGTGATCGTC 789421 Query 211083 TTTCCCGTGAGAGTCTTTACAAACACCTGCAT 211114 || ||||| || ||||| || || | ||||| Sbjct 789420 TTGCCCGTAAGCGTCTTGACGAAGATTTGCAT 789389 Score = 143 bits (158), Expect = 6e-29 Identities = 159/212 (75%), Gaps = 0/212 (0%) Strand=Plus/Minus Query 210903 AGGACAAGGTGAAGAGTGGACTCTTTTTGGATGTTATAATCCGCAAGGGTCCTTCCATCT 210962 || || | ||| || || ||||| || || ||||| |||||||| || || | ||||| Sbjct 789144 AGCACCAAGTGGAGCGTCGACTCCTTCTGAATGTTGTAATCCGCGAGCGTGCGGCCATCC 789085 Query 210963 TCCAGCTGCTTGCCTGCGAAGATAAGGCGTTGTTGGTCAGGAGGAACTCCTTCCTTGTCC 211022 || ||||||||||| || ||||| || ||||||||||| || |||| || |||||||| Sbjct 789084 TCGAGCTGCTTGCCCGCAAAGATGAGACGTTGTTGGTCTGGGGGAATACCCTCCTTGTCT 789025 Query 211023 TGGATCTTTTGTTTCACGTTTTCGATGGTGTCAGAGCTTTCAACCTCGAGAGTGATCGTC 211082 |||||||| || || || || || ||||| ||| || |||||||| ||||| ||| Sbjct 789024 TGGATCTTGGTCTTGACATTGTCAATCGTGTCCGAGGACTCGACCTCGAGGGTGATGGTC 788965 Query 211083 TTTCCCGTGAGAGTCTTTACAAACACCTGCAT 211114 || || || | ||||| || || | ||||| Sbjct 788964 TTGCCGGTCAAGGTCTTGACGAAGATTTGCAT 788933 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1159150930682280