Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Microbotryum_20saponariae_20[genbank_20GCA_5F900015475.1_202016-12- 23] 72 sequences; 28,653,577 total letters Query= NC_029996.1 Length=134272 Score E Sequences producing significant alignments: (Bits) Value seq20 93.3 4e-14 >seq20 Length=1456699 Score = 93.3 bits (102), Expect = 4e-14 Identities = 160/230 (70%), Gaps = 2/230 (1%) Strand=Plus/Minus Query 39058 CCTCCTCTTAAGCGTAACACCAAATGTAGCGTGCTCTCTTTTTGTATATTATAATCGGCA 39117 || |||| | ||| | |||||| || ||||| ||| || || || || |||||||| Sbjct 547008 CCACCTCGGAGGCGGAGCACCAAGTGCAGCGTCGACTCCTTCTGGATGTTGTAATCGGCG 546949 Query 39118 AGTGTTCGTTCGTCATCAAGCTGTTTGCCCGCAAATATAAGACGCTGCTGGTCGGTGGGC 39177 || || || | || || ||||| |||||||| || || ||||| || ||||| | ||| Sbjct 546948 AGCGTACGGCCATCCTCGAGCTGCTTGCCCGCGAAGATGAGACGTTGTTGGTCTGGGGGA 546889 Query 39178 ACGCTCTCTTTGTCCATGATTTTCTGTTTGAGCGTCGCC-ACCGTATCGCTCGACTCCAC 39236 | || ||| || ||| || || || | ||| | | | ||| || ||||| || Sbjct 546888 ATGCCCTCCTTATCCTGAATCTTAGCCTTTA-CGTTGTCGATCGTGTCCGAGGACTCAAC 546830 Query 39237 GTCCACCGTGATACTTTTTCCCGTCAGCGTTTTAACAAAGATTTGCATCT 39286 || | |||||| | || || || | || || |||||||||||||||| Sbjct 546829 CTCAAGCGTGATCGTCTTGCCGGTTAAGGTCTTGACAAAGATTTGCATCT 546780 Score = 91.5 bits (100), Expect = 1e-13 Identities = 146/210 (70%), Gaps = 0/210 (0%) Strand=Plus/Minus Query 39075 CACCAAATGTAGCGTGCTCTCTTTTTGTATATTATAATCGGCAAGTGTTCGTTCGTCATC 39134 |||||| || ||||| ||| || || || || ||||| || || || || | || || Sbjct 789370 CACCAAGTGGAGCGTCGACTCCTTCTGAATGTTGTAATCCGCGAGCGTGCGGCCATCCTC 789311 Query 39135 AAGCTGTTTGCCCGCAAATATAAGACGCTGCTGGTCGGTGGGCACGCTCTCTTTGTCCAT 39194 ||||| ||||||||||| || ||||| || ||||| | ||| | | ||| ||||| Sbjct 789310 GAGCTGCTTGCCCGCAAAGATGAGACGTTGTTGGTCTGGGGGAATACCCTCCTTGTCTTG 789251 Query 39195 GATTTTCTGTTTGAGCGTCGCCACCGTATCGCTCGACTCCACGTCCACCGTGATACTTTT 39254 ||| || |||| | | | ||| || ||||| || || | ||||| | || Sbjct 789250 GATCTTGGTCTTGACATTGTCAATCGTGTCCGAGGACTCGACCTCGAGGGTGATCGTCTT 789191 Query 39255 TCCCGTCAGCGTTTTAACAAAGATTTGCAT 39284 ||||| ||||| || || ||||||||||| Sbjct 789190 GCCCGTAAGCGTCTTGACGAAGATTTGCAT 789161 Score = 89.7 bits (98), Expect = 4e-13 Identities = 148/211 (70%), Gaps = 2/211 (1%) Strand=Plus/Minus Query 39075 CACCAAATGTAGCGTGCTCTCTTTTTGTATATTATAATCGGCAAGTGTTCGTTCGTCATC 39134 |||||| || ||||| ||| || || || || || ||||| || || || | || || Sbjct 547219 CACCAAGTGCAGCGTCGACTCCTTCTGGATGTTGTAGTCGGCGAGCGTACGGCCATCCTC 547160 Query 39135 AAGCTGTTTGCCCGCAAATATAAGACGCTGCTGGTCGGTGGGCACGCTCTCTTTGTCCAT 39194 ||||| |||||||| || || ||||| || ||||| | ||| | || ||| |||||| Sbjct 547159 GAGCTGCTTGCCCGCGAAGATGAGACGTTGTTGGTCTGGGGGAATGCCCTCCTTGTCCTG 547100 Query 39195 GATTTTCTGTTTGAGCGTCGCC-ACCGTATCGCTCGACTCCACGTCCACCGTGATACTTT 39253 || || |||| ||| | | | ||| || ||||| || || | |||||| | | Sbjct 547099 AATCTTGGCCTTGA-CGTTGTCGATCGTGTCCGAGGACTCAACCTCGAGCGTGATCGTCT 547041 Query 39254 TTCCCGTCAGCGTTTTAACAAAGATTTGCAT 39284 | || |||| || || || ||||||||||| Sbjct 547040 TGCCTGTCAAGGTCTTGACGAAGATTTGCAT 547010 Score = 86.0 bits (94), Expect = 5e-12 Identities = 146/212 (69%), Gaps = 0/212 (0%) Strand=Plus/Minus Query 39075 CACCAAATGTAGCGTGCTCTCTTTTTGTATATTATAATCGGCAAGTGTTCGTTCGTCATC 39134 |||||| || ||||| ||| || || || || ||||| || || || || | || || Sbjct 789142 CACCAAGTGGAGCGTCGACTCCTTCTGAATGTTGTAATCCGCGAGCGTGCGGCCATCCTC 789083 Query 39135 AAGCTGTTTGCCCGCAAATATAAGACGCTGCTGGTCGGTGGGCACGCTCTCTTTGTCCAT 39194 ||||| ||||||||||| || ||||| || ||||| | ||| | | ||| ||||| Sbjct 789082 GAGCTGCTTGCCCGCAAAGATGAGACGTTGTTGGTCTGGGGGAATACCCTCCTTGTCTTG 789023 Query 39195 GATTTTCTGTTTGAGCGTCGCCACCGTATCGCTCGACTCCACGTCCACCGTGATACTTTT 39254 ||| || |||| | | | ||| || ||||| || || | ||||| | || Sbjct 789022 GATCTTGGTCTTGACATTGTCAATCGTGTCCGAGGACTCGACCTCGAGGGTGATGGTCTT 788963 Query 39255 TCCCGTCAGCGTTTTAACAAAGATTTGCATCT 39286 || |||| || || || ||||||||||||| Sbjct 788962 GCCGGTCAAGGTCTTGACGAAGATTTGCATCT 788931 Score = 86.0 bits (94), Expect = 5e-12 Identities = 147/211 (70%), Gaps = 2/211 (1%) Strand=Plus/Minus Query 39075 CACCAAATGTAGCGTGCTCTCTTTTTGTATATTATAATCGGCAAGTGTTCGTTCGTCATC 39134 |||||| || ||||| ||| || || || || ||||| || || || || | || || Sbjct 789598 CACCAAGTGGAGCGTCGACTCCTTCTGAATGTTGTAATCCGCGAGCGTGCGGCCATCCTC 789539 Query 39135 AAGCTGTTTGCCCGCAAATATAAGACGCTGCTGGTCGGTGGGCACGCTCTCTTTGTCCAT 39194 ||||| |||||||| || || | ||||||||||| | ||| | || || |||| | | Sbjct 789538 GAGCTGCTTGCCCGCGAAGATCAATCGCTGCTGGTCTGGGGGAATGCCTTCCTTGT-CTT 789480 Query 39195 GATTTTCTGT-TTGAGCGTCGCCACCGTATCGCTCGACTCCACGTCCACCGTGATACTTT 39253 || | | || |||| | | | ||| || ||||| || || | ||||| | | Sbjct 789479 GAATCTTGGTCTTGACATTGTCGATCGTGTCCGAGGACTCGACCTCGAGGGTGATCGTCT 789420 Query 39254 TTCCCGTCAGCGTTTTAACAAAGATTTGCAT 39284 | ||||| ||||| || || ||||||||||| Sbjct 789419 TGCCCGTAAGCGTCTTGACGAAGATTTGCAT 789389 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 429545223073736