Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Microbotryum_20saponariae_20[genbank_20GCA_5F900015475.1_202016-12- 23] 72 sequences; 28,653,577 total letters Query= NC_031465.1 Length=360610 Score E Sequences producing significant alignments: (Bits) Value seq55 116 9e-21 seq36 104 5e-17 seq20 102 2e-16 >seq55 Length=539833 Score = 116 bits (128), Expect = 9e-21 Identities = 153/212 (72%), Gaps = 0/212 (0%) Strand=Plus/Minus Query 151886 GAGTCTGAGGACAAGATGAAGAGTAGACTCTTTTTGGATGTTGTAATCGGCTAAAGTTCT 151945 ||| | ||| || | || || || ||||| |||||||||||||| ||||| || || | Sbjct 107523 GAGGCGGAGCACCAAGTGGAGGGTCGACTCCTTTTGGATGTTGTAGTCGGCCAAGGTGCG 107464 Query 151946 CCCATCTTCTAGGCTTTTCCCGGCGAAGATAAGCCTCTGCTGGTCCGCCGAGATTCCTTC 152005 ||||| || || || ||||||||||| || | |||||||| | | ||| ||||| Sbjct 107463 GCCATCCTCGAGCTGCTTGCCGGCGAAGATGAGACGTTGCTGGTCTGGGGGGATGCCTTC 107404 Query 152006 CTTTTCTTGAATTTTTTGTTTGACAGTCTCTACGCTGTCTGAACTCTCTACTTCAAGAGT 152065 ||| ||||| || || ||||| | || | |||| || ||| || || || || Sbjct 107403 CTTGTCTTGGATCTTGGTCTTGACGTTGTCGATCGTGTCGGACGACTCGACCTCGAGGGT 107344 Query 152066 AATAGTTTTGCCCGTGAGAGTCTTCACGAAGA 152097 || || |||||||| |||||||| ||||||| Sbjct 107343 GATCGTCTTGCCCGTAAGAGTCTTGACGAAGA 107312 >seq36 Length=1841281 Score = 104 bits (114), Expect = 5e-17 Identities = 148/207 (71%), Gaps = 1/207 (0%) Strand=Plus/Plus Query 151897 CAAGATGAAGAGTAGACTCTTTTTGGATGTTGTAATCGGCTAAAGTTCTCCCATCTTCTA 151956 |||| || || || ||||| ||||||||||||||||| || | || | ||||| || | Sbjct 1559708 CAAG-TGGAGCGTCGACTCCTTTTGGATGTTGTAATCCGCGAGCGTGCGGCCATCCTCGA 1559766 Query 151957 GGCTTTTCCCGGCGAAGATAAGCCTCTGCTGGTCCGCCGAGATTCCTTCCTTTTCTTGAA 152016 | || ||||| ||||| || | |||||||| | | ||| |||||||| || || | Sbjct 1559767 GCTGCTTGCCGGCAAAGATGAGACGTTGCTGGTCGGGGGGGATGCCTTCCTTGTCCTGGA 1559826 Query 152017 TTTTTTGTTTGACAGTCTCTACGCTGTCTGAACTCTCTACTTCAAGAGTAATAGTTTTGC 152076 | || ||||| | || | |||| || ||| || || || || || || |||| Sbjct 1559827 TCTTGGTCTTGACGTTGTCGATCGTGTCGGACGACTCGACCTCGAGGGTGATGGTCTTGC 1559886 Query 152077 CCGTGAGAGTCTTCACGAAGACCTGCA 152103 ||||||| ||||| ||||||| |||| Sbjct 1559887 CCGTGAGGGTCTTGACGAAGATTTGCA 1559913 >seq20 Length=1456699 Score = 102 bits (112), Expect = 2e-16 Identities = 148/208 (71%), Gaps = 1/208 (0%) Strand=Plus/Minus Query 151897 CAAGATGAAGAGTAGACTCTTTTTGGATGTTGTAATCGGCTAAAGTTCTCCCATCTTCTA 151956 |||| || || || ||||| || || ||||||||||| || | || | ||||| || | Sbjct 789595 CAAG-TGGAGCGTCGACTCCTTCTGAATGTTGTAATCCGCGAGCGTGCGGCCATCCTCGA 789537 Query 151957 GGCTTTTCCCGGCGAAGATAAGCCTCTGCTGGTCCGCCGAGATTCCTTCCTTTTCTTGAA 152016 | || || |||||||| | | ||||||||| | | || |||||||| ||||||| Sbjct 789536 GCTGCTTGCCCGCGAAGATCAATCGCTGCTGGTCTGGGGGAATGCCTTCCTTGTCTTGAA 789477 Query 152017 TTTTTTGTTTGACAGTCTCTACGCTGTCTGAACTCTCTACTTCAAGAGTAATAGTTTTGC 152076 | || |||||| | || | |||| || ||| || || || || || || |||| Sbjct 789476 TCTTGGTCTTGACATTGTCGATCGTGTCCGAGGACTCGACCTCGAGGGTGATCGTCTTGC 789417 Query 152077 CCGTGAGAGTCTTCACGAAGACCTGCAT 152104 |||| || ||||| ||||||| ||||| Sbjct 789416 CCGTAAGCGTCTTGACGAAGATTTGCAT 789389 Score = 84.2 bits (92), Expect = 5e-11 Identities = 150/219 (68%), Gaps = 0/219 (0%) Strand=Plus/Minus Query 151886 GAGTCTGAGGACAAGATGAAGAGTAGACTCTTTTTGGATGTTGTAATCGGCTAAAGTTCT 151945 ||| | ||| || | || || || ||||| || || ||||||||||| || | || | Sbjct 789379 GAGACGGAGCACCAAGTGGAGCGTCGACTCCTTCTGAATGTTGTAATCCGCGAGCGTGCG 789320 Query 151946 CCCATCTTCTAGGCTTTTCCCGGCGAAGATAAGCCTCTGCTGGTCCGCCGAGATTCCTTC 152005 ||||| || || || || || ||||| || | || ||||| | | || || || Sbjct 789319 GCCATCCTCGAGCTGCTTGCCCGCAAAGATGAGACGTTGTTGGTCTGGGGGAATACCCTC 789260 Query 152006 CTTTTCTTGAATTTTTTGTTTGACAGTCTCTACGCTGTCTGAACTCTCTACTTCAAGAGT 152065 ||| ||||| || || |||||| | || | |||| || ||| || || || || Sbjct 789259 CTTGTCTTGGATCTTGGTCTTGACATTGTCAATCGTGTCCGAGGACTCGACCTCGAGGGT 789200 Query 152066 AATAGTTTTGCCCGTGAGAGTCTTCACGAAGACCTGCAT 152104 || || |||||||| || ||||| ||||||| ||||| Sbjct 789199 GATCGTCTTGCCCGTAAGCGTCTTGACGAAGATTTGCAT 789161 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1153819735600312