Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Microbotryum_20saponariae_20[genbank_20GCA_5F900015475.1_202016-12-
23] 72 sequences; 28,653,577 total letters
Query= NC_032255.1
Length=112536
Score E
Sequences producing significant alignments: (Bits) Value
seq36 147 2e-30
seq20 140 2e-28
seq55 127 1e-24
>seq36
Length=1841281
Score = 147 bits (162), Expect = 2e-30
Identities = 158/209 (76%), Gaps = 0/209 (0%)
Strand=Plus/Plus
Query 44128 CACCAGGTGAAGCGTGCTCTCCTTTTGGATGTTGTAATCGGCGAGTTGGCGCTCGTCGTC 44187
||||| ||| ||||| ||||||||||||||||||||| ||||| ||| | || ||
Sbjct 1559705 CACCAAGTGGAGCGTCGACTCCTTTTGGATGTTGTAATCCGCGAGCGTGCGGCCATCCTC 1559764
Query 44188 CAGCTGCTTCCCGGCAAAGATCAAACGCTGCTGATCTGAAGGCACACCTTCCTTTTCCGT 44247
|||||||| ||||||||||| | ||| ||||| || | || | |||||||| |||
Sbjct 1559765 GAGCTGCTTGCCGGCAAAGATGAGACGTTGCTGGTCGGGGGGGATGCCTTCCTTGTCCTG 1559824
Query 44248 TATCTTCTGCTTCAATGTTCCTATGGTGTCGGCGGATTCCACCTCCACCGTAATCGTCTT 44307
||||| ||| | | | || ||||||| || || ||||| | || || |||||
Sbjct 1559825 GATCTTGGTCTTGACGTTGTCGATCGTGTCGGACGACTCGACCTCGAGGGTGATGGTCTT 1559884
Query 44308 TCCCGTGAGGGTCTTCACGAAGATTTGCA 44336
|||||||||||||| |||||||||||||
Sbjct 1559885 GCCCGTGAGGGTCTTGACGAAGATTTGCA 1559913
>seq20
Length=1456699
Score = 140 bits (154), Expect = 2e-28
Identities = 161/215 (75%), Gaps = 4/215 (2%)
Strand=Plus/Minus
Query 44125 CAACACCAGGTGAAGCGTGCTCTCCTTTTGGATGTTGTAATCGGCGAGTTGGCGCTCGTC 44184
|| ||||| ||| ||||| |||||| || ||||||||||| ||||| ||| | ||
Sbjct 789601 CAGCACCAAGTGGAGCGTCGACTCCTTCTGAATGTTGTAATCCGCGAGCGTGCGGCCATC 789542
Query 44185 GTCCAGCTGCTTCCCGGCAAAGATCAAACGCTGCTGATCTGAAGGCACACCTTCCTTTTC 44244
|| |||||||| || || |||||||| |||||||| |||| || | |||||||| ||
Sbjct 789541 CTCGAGCTGCTTGCCCGCGAAGATCAATCGCTGCTGGTCTGGGGGAATGCCTTCCTTGTC 789482
Query 44245 CGTTATCTTCTGCTT--CAATGTTCCTATGGTGTCGGCGGATTCCACCTCCACCGTAATC 44302
||||| ||| || ||| | || ||||| | ||| || ||||| | || |||
Sbjct 789481 TTGAATCTTGGTCTTGACATTGT--CGATCGTGTCCGAGGACTCGACCTCGAGGGTGATC 789424
Query 44303 GTCTTTCCCGTGAGGGTCTTCACGAAGATTTGCAT 44337
||||| ||||| || ||||| ||||||||||||||
Sbjct 789423 GTCTTGCCCGTAAGCGTCTTGACGAAGATTTGCAT 789389
Score = 129 bits (142), Expect = 4e-25
Identities = 157/212 (74%), Gaps = 4/212 (2%)
Strand=Plus/Minus
Query 44128 CACCAGGTGAAGCGTGCTCTCCTTTTGGATGTTGTAATCGGCGAGTTGGCGCTCGTCGTC 44187
||||| ||| ||||| |||||| || ||||||||||| ||||| ||| | || ||
Sbjct 789370 CACCAAGTGGAGCGTCGACTCCTTCTGAATGTTGTAATCCGCGAGCGTGCGGCCATCCTC 789311
Query 44188 CAGCTGCTTCCCGGCAAAGATCAAACGCTGCTGATCTGAAGGCACACCTTCCTTTTCCGT 44247
|||||||| || |||||||| | ||| || || |||| || | ||| ||||| ||
Sbjct 789310 GAGCTGCTTGCCCGCAAAGATGAGACGTTGTTGGTCTGGGGGAATACCCTCCTTGTCTTG 789251
Query 44248 TATCTTCTGCTT--CAATGTTCCTATGGTGTCGGCGGATTCCACCTCCACCGTAATCGTC 44305
||||| ||| || ||| | || ||||| | ||| || ||||| | || ||||||
Sbjct 789250 GATCTTGGTCTTGACATTGT--CAATCGTGTCCGAGGACTCGACCTCGAGGGTGATCGTC 789193
Query 44306 TTTCCCGTGAGGGTCTTCACGAAGATTTGCAT 44337
|| ||||| || ||||| ||||||||||||||
Sbjct 789192 TTGCCCGTAAGCGTCTTGACGAAGATTTGCAT 789161
Score = 125 bits (138), Expect = 5e-24
Identities = 168/234 (72%), Gaps = 0/234 (0%)
Strand=Plus/Minus
Query 44104 TTTCATTCCCCCTCTCAGTCTCAACACCAGGTGAAGCGTGCTCTCCTTTTGGATGTTGTA 44163
|| ||| || |||| || | | ||||| ||| ||||| |||||| |||||||||||
Sbjct 547015 TTGCATACCACCTCGGAGGCGGAGCACCAAGTGCAGCGTCGACTCCTTCTGGATGTTGTA 546956
Query 44164 ATCGGCGAGTTGGCGCTCGTCGTCCAGCTGCTTCCCGGCAAAGATCAAACGCTGCTGATC 44223
||||||||| || | || || |||||||| || || ||||| | ||| || || ||
Sbjct 546955 ATCGGCGAGCGTACGGCCATCCTCGAGCTGCTTGCCCGCGAAGATGAGACGTTGTTGGTC 546896
Query 44224 TGAAGGCACACCTTCCTTTTCCGTTATCTTCTGCTTCAATGTTCCTATGGTGTCGGCGGA 44283
|| || | || ||||| ||| ||||| ||| | | | || ||||| | |||
Sbjct 546895 TGGGGGAATGCCCTCCTTATCCTGAATCTTAGCCTTTACGTTGTCGATCGTGTCCGAGGA 546836
Query 44284 TTCCACCTCCACCGTAATCGTCTTTCCCGTGAGGGTCTTCACGAAGATTTGCAT 44337
|| ||||| | ||| |||||||| || || | |||||| || |||||||||||
Sbjct 546835 CTCAACCTCAAGCGTGATCGTCTTGCCGGTTAAGGTCTTGACAAAGATTTGCAT 546782
Score = 123 bits (136), Expect = 2e-23
Identities = 164/228 (72%), Gaps = 0/228 (0%)
Strand=Plus/Minus
Query 44110 TCCCCCTCTCAGTCTCAACACCAGGTGAAGCGTGCTCTCCTTTTGGATGTTGTAATCGGC 44169
||| |||| || | | ||||| ||| ||||| |||||| ||||||||||| |||||
Sbjct 547237 TCCGCCTCGGAGACGGAGCACCAAGTGCAGCGTCGACTCCTTCTGGATGTTGTAGTCGGC 547178
Query 44170 GAGTTGGCGCTCGTCGTCCAGCTGCTTCCCGGCAAAGATCAAACGCTGCTGATCTGAAGG 44229
||| || | || || |||||||| || || ||||| | ||| || || |||| ||
Sbjct 547177 GAGCGTACGGCCATCCTCGAGCTGCTTGCCCGCGAAGATGAGACGTTGTTGGTCTGGGGG 547118
Query 44230 CACACCTTCCTTTTCCGTTATCTTCTGCTTCAATGTTCCTATGGTGTCGGCGGATTCCAC 44289
| || ||||| ||| ||||| ||| | | | || ||||| | ||| || ||
Sbjct 547117 AATGCCCTCCTTGTCCTGAATCTTGGCCTTGACGTTGTCGATCGTGTCCGAGGACTCAAC 547058
Query 44290 CTCCACCGTAATCGTCTTTCCCGTGAGGGTCTTCACGAAGATTTGCAT 44337
||| | ||| |||||||| || || | |||||| ||||||||||||||
Sbjct 547057 CTCGAGCGTGATCGTCTTGCCTGTCAAGGTCTTGACGAAGATTTGCAT 547010
Score = 120 bits (132), Expect = 2e-22
Identities = 155/212 (73%), Gaps = 4/212 (2%)
Strand=Plus/Minus
Query 44128 CACCAGGTGAAGCGTGCTCTCCTTTTGGATGTTGTAATCGGCGAGTTGGCGCTCGTCGTC 44187
||||| ||| ||||| |||||| || ||||||||||| ||||| ||| | || ||
Sbjct 789142 CACCAAGTGGAGCGTCGACTCCTTCTGAATGTTGTAATCCGCGAGCGTGCGGCCATCCTC 789083
Query 44188 CAGCTGCTTCCCGGCAAAGATCAAACGCTGCTGATCTGAAGGCACACCTTCCTTTTCCGT 44247
|||||||| || |||||||| | ||| || || |||| || | ||| ||||| ||
Sbjct 789082 GAGCTGCTTGCCCGCAAAGATGAGACGTTGTTGGTCTGGGGGAATACCCTCCTTGTCTTG 789023
Query 44248 TATCTTCTGCTT--CAATGTTCCTATGGTGTCGGCGGATTCCACCTCCACCGTAATCGTC 44305
||||| ||| || ||| | || ||||| | ||| || ||||| | || || |||
Sbjct 789022 GATCTTGGTCTTGACATTGT--CAATCGTGTCCGAGGACTCGACCTCGAGGGTGATGGTC 788965
Query 44306 TTTCCCGTGAGGGTCTTCACGAAGATTTGCAT 44337
|| || || | |||||| ||||||||||||||
Sbjct 788964 TTGCCGGTCAAGGTCTTGACGAAGATTTGCAT 788933
>seq55
Length=539833
Score = 127 bits (140), Expect = 1e-24
Identities = 156/213 (73%), Gaps = 0/213 (0%)
Strand=Plus/Minus
Query 44128 CACCAGGTGAAGCGTGCTCTCCTTTTGGATGTTGTAATCGGCGAGTTGGCGCTCGTCGTC 44187
||||| ||| || || |||||||||||||||||| ||||| | ||| | || ||
Sbjct 107514 CACCAAGTGGAGGGTCGACTCCTTTTGGATGTTGTAGTCGGCCAAGGTGCGGCCATCCTC 107455
Query 44188 CAGCTGCTTCCCGGCAAAGATCAAACGCTGCTGATCTGAAGGCACACCTTCCTTTTCCGT 44247
|||||||| ||||| ||||| | ||| ||||| |||| || | |||||||| ||
Sbjct 107454 GAGCTGCTTGCCGGCGAAGATGAGACGTTGCTGGTCTGGGGGGATGCCTTCCTTGTCTTG 107395
Query 44248 TATCTTCTGCTTCAATGTTCCTATGGTGTCGGCGGATTCCACCTCCACCGTAATCGTCTT 44307
||||| ||| | | | || ||||||| || || ||||| | || ||||||||
Sbjct 107394 GATCTTGGTCTTGACGTTGTCGATCGTGTCGGACGACTCGACCTCGAGGGTGATCGTCTT 107335
Query 44308 TCCCGTGAGGGTCTTCACGAAGATTTGCATGAT 44340
||||| || ||||| |||||||||||| ||||
Sbjct 107334 GCCCGTAAGAGTCTTGACGAAGATTTGCCTGAT 107302
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 359990084108424
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |