Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Microbotryum_20saponariae_20[genbank_20GCA_5F900015975.1_202016-12- 23] 161 sequences; 29,508,937 total letters Query= NC_000852.5 Length=330611 Score E Sequences producing significant alignments: (Bits) Value seq99 100 6e-16 >seq99 Length=1308205 Score = 100 bits (110), Expect = 6e-16 Identities = 670/1051 (64%), Gaps = 59/1051 (6%) Strand=Plus/Minus Query 281739 TTCGTGAAGATATACCTTGCACTCGCGTGGTCTTTACCACCCTGCAGCCTCGACCCAAAC 281798 ||||||||||| || | || || |||||||||||| ||||| | | ||||| Sbjct 699330 TTCGTGAAGATGTAACGAGCGGAAGCCGCGTCTTTACCACCTTGCAGACGAGTACCAAAT 699271 Query 281799 TGACCCTCCGG--CAACAACCAGTTAATGTTATTGCTCCCGACGTAATCCTGAGCCAGGT 281856 ||||| | ||| | | || ||| | ||| ||| ||||||| | | || |||||| Sbjct 699270 TGACCGTTCGGGTCGAGAA--TGTTGAGGTTGTTGGACCCGACGAACTGTTGCGCCAGGC 699213 Query 281857 TGACGATTGTCCCCTGAAGCGATACCTCACCGTGGTGATAGGCGCTGTGTTCGGCAACAT 281916 || ||| || || || | | |||||||| || || || ||| ||||| || | Sbjct 699212 CGATGATGGTGCCTTGCAAACTCATTTCACCGTGATGGTACGCCGAGTGCTCGGCGACGT 699153 Query 281917 AACCACTGAACTGTGCTACCTTCACGTCTGATGTCAAGTTGCGTTTGAAAGCGCAA---T 281973 |||| | || ||| | ||||| | || ||||| ||||| ||||| |||| Sbjct 699152 AACCGCCCAATTGTCCGACCTTGATCTCCTGCGTCAACTTGCGCTTGAA---GCAACCGA 699096 Query 281974 ATAATACTTTTCGTTGAGAAGGCTTGAAACCATCAACGACAGACGGAATGCTGCGTTCCA 282033 | || || || |||||| || ||||| ||||||| |||||| || || ||| | Sbjct 699095 ACAAGACCTTGCGTTGACCCGGTTTGAACCCATCAATGACAGAGGGGATAGAGCGCACGT 699036 Query 282034 GGTCATACCGCGAGAACAAAATAAGTTCCTTGTCAATGAAGT-CGGGAACGGGAACCTCG 282092 ||| | |||||| | || | ||||||| || || | | || |||| || ||| Sbjct 699035 TGTCGGCCATCGAGAAGAGGATCAACTCCTTGTTGATAAAATCCTCGATCGGG-ACTTCG 698977 Query 282093 GGCTTCTTGTGGTCAAGTTGGTTTCCCGGCTCGTATGCCGTC--ATCCACTCCTTGCGAT 282150 | | ||||||| || | | || || || | ||| || | ||| |||||||| | Sbjct 698976 GCGATGCTGTGGTCGAGGTACGTGCCGGGGACG-AAGCC-TCGGAGCCATTCCTTGCGGT 698919 Query 282151 CCTCGGCCCGAGTCTTGTTGAAAGAACGATCGATGAGCTC-------TCCAGAATCAGAA 282203 |||||| |||||||||| | || || | ||| ||| | || ||| Sbjct 698918 TGTCGGCCTTCTTCTTGTTGAAGGCCATGTCAATCAACTCGCGCTCTTCCTGCGTC-GAA 698860 Query 282204 GTCCACGTAAACGTCTTCATAAGAGTCTTCAGGTTGCTGAAGTAATGCTTG---GCATCA 282260 | | |||| | | | | | || ||||| ||||| |||| || || Sbjct 698859 GGGC---GGAACGGCAAGCGATGCTTGTCCATGTTGCCAAAGTA---CTTGACCGCGTCC 698806 Query 282261 GTGCTGGAACTCGTACCGAGACCCTTGTAATACTTGATTTGATACTTAGAATAATCCTTC 282320 || | ||||||||| | |||||| | |||||||| | | | | || | || Sbjct 698805 CTGGCGTCACTCGTACCCAATCCCTTGAAGTACTTGATGCGCCATCCACGACCAT-CATC 698747 Query 282321 GTGGTCTT-CACCCAATCCTCGTAATCCGGAAGACTATAAAATTCGCGAACGTCCT--TT 282377 | |||| | ||| | |||||| | |||| | ||||| | ||| |||| || Sbjct 698746 GGTCTCTTCCTTCCATTGCTCGTACTGAGGAATTGTGAAAAAT--GACAAC-TCCTTGTT 698690 Query 282378 CCTTTCTTGG-CGAC--CACGATAGGTGTGATGAACTTCTTCAAGAA-ACCTGGAATTT- 282432 || ||||| || | ||||| || |||||||||| |||||| ||| | ||| Sbjct 698689 CC--CCTTGGTCGCCTTGACGATGGGGGTGATGAACTCGAGCAAGAAGCCCTTCAGTTTG 698632 Query 282433 --CTAGGAGACTGGGAAAACAGCTATGGAAAAAGTTCATGACAAGACCAGAAATGTGAGT 282490 | |||| || || ||| || || ||||| |||| ||||| ||||| | Sbjct 698631 AGCAAGGA----AGGGAACCAGTAATCGAGGAAGTTGATGATCAGACCCTTGATGTGCGA 698576 Query 282491 TCCGTCAACATCCGCGTCGGTCATGATCATCACATGACCGTATCTCAGAGAAGAAGTGTC 282550 ||| || |||| |||| ||||||||| | | ||||| | || || ||| Sbjct 698575 TCCATCGTGATCCTGATCGGCCATGATCATGAGCTTGCCGTAACGGAGCGAGTCGACGTC 698516 Query 282551 TTTGTACACTTTACCGGTTTGAAGGCCCAAAATTTGTTTGAGCGCGGTGATTTCTTCGTT 282610 |||| ||||| || || | |||||| || || |||| ||| || || | || Sbjct 698515 GGTGTAGACTTTGCCCTGCTGCAAGCCCAAGATCTGCTTGATCGCTTGAATCTCGACATT 698456 Query 282611 CTTTGTGA-TACTTGCCACAGATGCATCGCGAACGTTCAGCAACTTACCGCGGAGAGGAA 282669 | || ||| | | | || || || ||||| |||||||| || || | ||| | Sbjct 698455 ATCGAGGAGGGCTTTGC-CCGCCGCTTCACGCACGTTGAGCAACTTTCCTCGCAAAGGGA 698397 Query 282670 AAACACCATATCTCTCGCGACCGACCACGGACAGTCCTGCAATTGCAAGTG--TTGCTGC 282727 | |||||||| | || |||||||| |||| ||| || | | || || | ||| || Sbjct 698396 AGACACCATAGTTGTCTCGACCGACGACGGCCAGACCCGACACGGCGAGCGCCTTG--GC 698339 Query 282728 GGAATCTCCCTCCGTCAAGATGAGAGTACAC 282758 ||||||||| || ||||||||||| || ||| Sbjct 698338 GGAATCTCCTTCGGTCAAGATGAGCGTGCAC 698308 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1057821817907430