Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Microbotryum_20saponariae_20[genbank_20GCA_5F900015975.1_202016-12- 23] 161 sequences; 29,508,937 total letters Query= NC_001350.1 Length=112930 Score E Sequences producing significant alignments: (Bits) Value seq88 86.0 5e-12 >seq88 Length=463073 Score = 86.0 bits (94), Expect = 5e-12 Identities = 223/337 (66%), Gaps = 5/337 (1%) Strand=Plus/Plus Query 101927 TTCCAAGCACACATTAACATCCTTCTATCTGTAGGGTTTGTTTTTATAGTATCAATCAAC 101986 |||||||||| || | ||||| ||||| || |||||| || ||| | | | | Sbjct 278018 TTCCAAGCACTCAAGATGATCCTCCTATCGGTGGGGTTTTCCTTGATACTCTTGACAGCC 278077 Query 101987 TGTTTTAATTGGTCAACTCCTTCTCCTTTATAATCGCGCCCAACACCTT--TATATTCTG 102044 || | || || || || ||| | ||| |||||| || || | |||| |||| Sbjct 278078 TGCATCAACTGATCGACCCCTCCCCCTG-ATAATCAT--CCTTGGCCGTCCTATACTCTG 278134 Query 102045 CTCCGAAATGCCTCCACTGAAATCCATACACAGGTCCAAGATCTCCTTCATCTCTGTCAT 102104 | ||||| ||||||||||| || ||||| || ||||| | ||| || || || || | Sbjct 278135 CGCCGAAGTGCCTCCACTGGAACCCATAAACCGGTCCCAAATCCCCCTCTTCCCTATGCC 278194 Query 102105 AAAAACCAAGTTTATCTAAAAATGATCTAGATCCATTCGCATCCCAAATGTGCACGCCAG 102164 || |||| || || | |||| ||| ||||||||| |||||||||| | || || Sbjct 278195 CCAACCCAACCTTGTCCAGAAATTCTCTCGATCCATTCCCATCCCAAATCTTGACCCCCT 278254 Query 102165 CTGCTGATAGCTCTTTGCTGTCAGTAGATCCTCTGATAAACCACAACAGTTCTTCAACAA 102224 | || | ||| || || ||||||| | ||||| | ||||| || | | Sbjct 278255 TGTCGGACAATAATTTCGAATCGGTCGATCCTCGAACGAACCAAAGGAGTTCCTCGATGA 278314 Query 102225 CACCTCTCCAAAATACTCTCTTAGTAGTTAAAAGTGG 102261 ||||| | ||| || |||| || || ||||| || Sbjct 278315 TACCTCGCGTAAAGACCTTCTTGGTGGTCAAAAGGGG 278351 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 361250491157411