Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Microbotryum_20saponariae_20[genbank_20GCA_5F900015975.1_202016-12- 23] 161 sequences; 29,508,937 total letters Query= NC_002169.1 Length=135611 Score E Sequences producing significant alignments: (Bits) Value seq56 138 1e-27 seq80 136 3e-27 seq105 123 2e-23 >seq56 Length=195491 Score = 138 bits (152), Expect = 1e-27 Identities = 157/211 (74%), Gaps = 0/211 (0%) Strand=Plus/Minus Query 118529 CACCAAGTGGATTGTAGACTCTTTTTGAATGTTGTAATCGCTCATAGTGCGCGTATCCTC 118588 ||||||||||| || ||||| ||||| |||||||| ||| || ||||| |||||| Sbjct 107511 CACCAAGTGGAGGGTCGACTCCTTTTGGATGTTGTAGTCGGCCAAGGTGCGGCCATCCTC 107452 Query 118589 GAGCTGTTTTCCAGCGTAGATGAGACGCTGCTGATCGGGAGGTATGCCCTCCTTGTCTGT 118648 |||||| || || ||| |||||||||| ||||| || || || ||||| ||||||||| Sbjct 107451 GAGCTGCTTGCCGGCGAAGATGAGACGTTGCTGGTCTGGGGGGATGCCTTCCTTGTCTTG 107392 Query 118649 AATTTTTTGTTTAACCTGTTCGACGGTGTCCGTGCTCTCGACCTCGACGGTCACCGTTTT 118708 || || || || | |||| ||||| | ||||||||||| ||| | ||| || Sbjct 107391 GATCTTGGTCTTGACGTTGTCGATCGTGTCGGACGACTCGACCTCGAGGGTGATCGTCTT 107332 Query 118709 GCCGGTCAGAGTTTTTACAAAAATCTGCATG 118739 ||| || ||||| || || || || ||| || Sbjct 107331 GCCCGTAAGAGTCTTGACGAAGATTTGCCTG 107301 >seq80 Length=1167844 Score = 136 bits (150), Expect = 3e-27 Identities = 158/213 (74%), Gaps = 0/213 (0%) Strand=Plus/Minus Query 118526 CAACACCAAGTGGATTGTAGACTCTTTTTGAATGTTGTAATCGCTCATAGTGCGCGTATC 118585 || ||||||||||| || ||||| || |||||||||||||| | ||||| ||| Sbjct 789599 CAGCACCAAGTGGAGCGTCGACTCCTTCTGAATGTTGTAATCCGCGAGCGTGCGGCCATC 789540 Query 118586 CTCGAGCTGTTTTCCAGCGTAGATGAGACGCTGCTGATCGGGAGGTATGCCCTCCTTGTC 118645 ||||||||| || || ||| |||| | |||||||| || || || ||||| |||||||| Sbjct 789539 CTCGAGCTGCTTGCCCGCGAAGATCAATCGCTGCTGGTCTGGGGGAATGCCTTCCTTGTC 789480 Query 118646 TGTAATTTTTTGTTTAACCTGTTCGACGGTGTCCGTGCTCTCGACCTCGACGGTCACCGT 118705 | ||| || || || | |||| ||||||| | ||||||||||| ||| | ||| Sbjct 789479 TTGAATCTTGGTCTTGACATTGTCGATCGTGTCCGAGGACTCGACCTCGAGGGTGATCGT 789420 Query 118706 TTTGCCGGTCAGAGTTTTTACAAAAATCTGCAT 118738 ||||| || || || || || || || ||||| Sbjct 789419 CTTGCCCGTAAGCGTCTTGACGAAGATTTGCAT 789387 Score = 129 bits (142), Expect = 5e-25 Identities = 166/229 (72%), Gaps = 0/229 (0%) Strand=Plus/Minus Query 118510 TACCTCCGCGTAATCTCAACACCAAGTGGATTGTAGACTCTTTTTGAATGTTGTAATCGC 118569 |||| ||||| | | | ||||||||||| || ||||| || |||||||||||||| Sbjct 789159 TACCACCGCGGAGACGGAGCACCAAGTGGAGCGTCGACTCCTTCTGAATGTTGTAATCCG 789100 Query 118570 TCATAGTGCGCGTATCCTCGAGCTGTTTTCCAGCGTAGATGAGACGCTGCTGATCGGGAG 118629 | ||||| |||||||||||| || || || |||||||||| || || || || | Sbjct 789099 CGAGCGTGCGGCCATCCTCGAGCTGCTTGCCCGCAAAGATGAGACGTTGTTGGTCTGGGG 789040 Query 118630 GTATGCCCTCCTTGTCTGTAATTTTTTGTTTAACCTGTTCGACGGTGTCCGTGCTCTCGA 118689 | || |||||||||||| || || || || | || | ||||||| | ||||| Sbjct 789039 GAATACCCTCCTTGTCTTGGATCTTGGTCTTGACATTGTCAATCGTGTCCGAGGACTCGA 788980 Query 118690 CCTCGACGGTCACCGTTTTGCCGGTCAGAGTTTTTACAAAAATCTGCAT 118738 |||||| ||| | || |||||||||| || || || || || ||||| Sbjct 788979 CCTCGAGGGTGATGGTCTTGCCGGTCAAGGTCTTGACGAAGATTTGCAT 788931 Score = 127 bits (140), Expect = 2e-24 Identities = 154/210 (73%), Gaps = 0/210 (0%) Strand=Plus/Minus Query 118529 CACCAAGTGGATTGTAGACTCTTTTTGAATGTTGTAATCGCTCATAGTGCGCGTATCCTC 118588 ||||||||||| || ||||| || |||||||||||||| | ||||| |||||| Sbjct 789368 CACCAAGTGGAGCGTCGACTCCTTCTGAATGTTGTAATCCGCGAGCGTGCGGCCATCCTC 789309 Query 118589 GAGCTGTTTTCCAGCGTAGATGAGACGCTGCTGATCGGGAGGTATGCCCTCCTTGTCTGT 118648 |||||| || || || |||||||||| || || || || || || |||||||||||| Sbjct 789308 GAGCTGCTTGCCCGCAAAGATGAGACGTTGTTGGTCTGGGGGAATACCCTCCTTGTCTTG 789249 Query 118649 AATTTTTTGTTTAACCTGTTCGACGGTGTCCGTGCTCTCGACCTCGACGGTCACCGTTTT 118708 || || || || | || | ||||||| | ||||||||||| ||| | ||| || Sbjct 789248 GATCTTGGTCTTGACATTGTCAATCGTGTCCGAGGACTCGACCTCGAGGGTGATCGTCTT 789189 Query 118709 GCCGGTCAGAGTTTTTACAAAAATCTGCAT 118738 ||| || || || || || || || ||||| Sbjct 789188 GCCCGTAAGCGTCTTGACGAAGATTTGCAT 789159 Score = 118 bits (130), Expect = 9e-22 Identities = 152/210 (72%), Gaps = 0/210 (0%) Strand=Plus/Minus Query 118529 CACCAAGTGGATTGTAGACTCTTTTTGAATGTTGTAATCGCTCATAGTGCGCGTATCCTC 118588 ||||||||| | || ||||| || || |||||||||||| | || || |||||| Sbjct 546986 CACCAAGTGCAGCGTCGACTCCTTCTGGATGTTGTAATCGGCGAGCGTACGGCCATCCTC 546927 Query 118589 GAGCTGTTTTCCAGCGTAGATGAGACGCTGCTGATCGGGAGGTATGCCCTCCTTGTCTGT 118648 |||||| || || ||| |||||||||| || || || || || ||||||||||| || Sbjct 546926 GAGCTGCTTGCCCGCGAAGATGAGACGTTGTTGGTCTGGGGGAATGCCCTCCTTATCCTG 546867 Query 118649 AATTTTTTGTTTAACCTGTTCGACGGTGTCCGTGCTCTCGACCTCGACGGTCACCGTTTT 118708 ||| || || || | |||| ||||||| | ||| ||||| | || | ||| || Sbjct 546866 AATCTTAGCCTTTACGTTGTCGATCGTGTCCGAGGACTCAACCTCAAGCGTGATCGTCTT 546807 Query 118709 GCCGGTCAGAGTTTTTACAAAAATCTGCAT 118738 |||||| | || || ||||| || ||||| Sbjct 546806 GCCGGTTAAGGTCTTGACAAAGATTTGCAT 546777 Score = 118 bits (130), Expect = 9e-22 Identities = 152/210 (72%), Gaps = 0/210 (0%) Strand=Plus/Minus Query 118529 CACCAAGTGGATTGTAGACTCTTTTTGAATGTTGTAATCGCTCATAGTGCGCGTATCCTC 118588 ||||||||| | || ||||| || || |||||||| ||| | || || |||||| Sbjct 547214 CACCAAGTGCAGCGTCGACTCCTTCTGGATGTTGTAGTCGGCGAGCGTACGGCCATCCTC 547155 Query 118589 GAGCTGTTTTCCAGCGTAGATGAGACGCTGCTGATCGGGAGGTATGCCCTCCTTGTCTGT 118648 |||||| || || ||| |||||||||| || || || || || |||||||||||||| Sbjct 547154 GAGCTGCTTGCCCGCGAAGATGAGACGTTGTTGGTCTGGGGGAATGCCCTCCTTGTCCTG 547095 Query 118649 AATTTTTTGTTTAACCTGTTCGACGGTGTCCGTGCTCTCGACCTCGACGGTCACCGTTTT 118708 ||| || || || | |||| ||||||| | ||| ||||||| || | ||| || Sbjct 547094 AATCTTGGCCTTGACGTTGTCGATCGTGTCCGAGGACTCAACCTCGAGCGTGATCGTCTT 547035 Query 118709 GCCGGTCAGAGTTTTTACAAAAATCTGCAT 118738 ||| |||| || || || || || ||||| Sbjct 547034 GCCTGTCAAGGTCTTGACGAAGATTTGCAT 547005 >seq105 Length=561522 Score = 123 bits (136), Expect = 2e-23 Identities = 156/211 (74%), Gaps = 4/211 (2%) Strand=Plus/Plus Query 118529 CACCAAGTGGATTGTAGACTCTTTTTGAATGTTGTAATCGCTCATAGTGCGCGTATCCTC 118588 ||||||||||| || ||||| ||||| ||||||||||| | ||||| |||||| Sbjct 279994 CACCAAGTGGAGCGTCGACTCCTTTTGGATGTTGTAATCCGCGAGCGTGCGGCCATCCTC 280053 Query 118589 GAGCTGTTTTCCAGCGTAGATGAGACGCTGCTGATCGGGAGGTATGCCCTCCTTGT-CTG 118647 |||||| || || || |||||||||| ||||| ||||| || ||||| ||||||| ||| Sbjct 280054 GAGCTGCTTGCCGGCAAAGATGAGACGTTGCTGGTCGGGGGGGATGCCTTCCTTGTCCTG 280113 Query 118648 TAATTTTTTGT-TTAACCTGTTCGACGGTGTCCGTGCTCTCGACCTCGACGGTCACCGTT 118706 | | || || || || | |||| ||||| | ||||||||||| ||| | || Sbjct 280114 GA--TCTTGGTCTTGACGTTGTCGATCGTGTCGGACGACTCGACCTCGAGGGTGATGGTC 280171 Query 118707 TTGCCGGTCAGAGTTTTTACAAAAATCTGCA 118737 ||||| || || || || || || || |||| Sbjct 280172 TTGCCCGTGAGGGTCTTGACGAAGATTTGCA 280202 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 433829548743412