Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Microbotryum_20saponariae_20[genbank_20GCA_5F900015975.1_202016-12-
23] 161 sequences; 29,508,937 total letters
Query= NC_003083.1
Length=118584
Score E
Sequences producing significant alignments: (Bits) Value
seq80 84.2 2e-11
>seq80
Length=1167844
Score = 84.2 bits (92), Expect = 2e-11
Identities = 148/213 (69%), Gaps = 2/213 (1%)
Strand=Plus/Minus
Query 18114 AGTACCATGTGAAGTGTTGATTCTTTTTGAATGTTGTAGTCGGCCATTGTTTTACAATCT 18173
|| |||| ||| || || || || || ||||||||||| || || | || | |||
Sbjct 789142 AGCACCAAGTGGAGCGTCGACTCCTTCTGAATGTTGTAATCCGCGAGCGTGCGGCCATCC 789083
Query 18174 TCCAATTGTTTGCCCGCATAGATAAGTCTTTGTTGATCCACGGGCACGCCTTCCTTATCG 18233
|| | || ||||||||| |||| || | |||||| || ||| | || ||||| ||
Sbjct 789082 TCGAGCTGCTTGCCCGCAAAGATGAGACGTTGTTGGTCTGGGGGAATACCCTCCTTGTCT 789023
Query 18234 GCAAT-TTGTTGCTTGACCTGTGCAACAGTGTCACCGGGCTCGGTTTCAATGGTGATGCT 18292
|| ||| | |||||| | ||| ||||| || |||| || | ||||||| |
Sbjct 789022 TGGATCTTGGT-CTTGACATTGTCAATCGTGTCCGAGGACTCGACCTCGAGGGTGATGGT 788964
Query 18293 TTTGCCGGTCAATGTTTTTACAAAAATTTGCAT 18325
||||||||||| || || || || ||||||||
Sbjct 788963 CTTGCCGGTCAAGGTCTTGACGAAGATTTGCAT 788931
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 379343255655945
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |