Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Microbotryum_20saponariae_20[genbank_20GCA_5F900015975.1_202016-12-
23] 161 sequences; 29,508,937 total letters
Query= NC_003310.1
Length=196858
Score E
Sequences producing significant alignments: (Bits) Value
seq85 93.3 5e-14
>seq85
Length=404085
Score = 93.3 bits (102), Expect = 5e-14
Identities = 412/646 (64%), Gaps = 10/646 (2%)
Strand=Plus/Plus
Query 63248 CCACTCTCCGTCATCCTTCACTCGTTTCATAAAGAGATCAGGAATCCAAAGAGCTATAAA 63307
|||||| | | | ||| || || | |||||| ||||| |||||||| || || | ||
Sbjct 380641 CCACTCGCTGGCGGCCTCGACACGCTCCATAAACAGATCGGGAATCCAGAGCGCAAAGAA 380700
Query 63308 TAGATCTCTTGTTCTATGTTCCTCGTTTCCTGTATTCTTTTTAAGATCGAGGAACGCCAT 63367
||||| | | | ||||| || || ||||| ||| || |||||| | |
Sbjct 380701 GAGATCACGAGCGCGGACCTCCTCCTTGCCGTGGTTCTTGCGAAGGTCCAGGAACTCGAA 380760
Query 63368 AATATCAGAATGCCACGGTTCCAAGTATATGGCCATAACTCCAGGCCGTTTGTTTCCTCC 63427
| |||| ||||| || || | ||| || || | |||| || || ||||| || ||
Sbjct 380761 GACGTCAGCGTGCCATGGCTCGAGGTAGATCGCGAAGGCTCCGGGACGCTTGTTGCCACC 380820
Query 63428 CTGATCTATGTATCTAGCGGTGTTATTATAAACTCTCAACATTGGAATAATACCGTTTGA 63487
|| || | ||| | |||||||| || || || | | ||| || | || ||||| ||
Sbjct 380821 TTGGTCGACGTAGCGCGCGGTGTTGTTGTAGACACGGAGCATGGGGACGATGCCGTTCGA 380880
Query 63488 TATACCATTGGTACCGGAGATATAGCCTCCACTGGCACGAATATTACTAATTGATAGACC 63547
|| || || |||| ||| || || | || || || || || | |||
Sbjct 380881 GTAGCCGTTCGTGCCGGCGATGTAAGAGCCGGTCGCGCGGATGTTGTGGATGCTCAAACC 380940
Query 63548 TATTCCCCCTGCCATTTTAGAGATTAATGCGCATCGTTTTAA-CGTGTCATAGATGCCTT 63606
|| || || || | || ||||| | ||||| ||| || | |||||| ||||||||||
Sbjct 380941 GATACCACCGGCGGTCTTGGAGATGAGCGCGCA-CGTCTTGAGCGTGTCGTAGATGCCTT 380999
Query 63607 CTATGCTATCATCGATCATGTTAAGTAGAAAACAGCTAGACATTTGGTGACGAGTAGTTC 63666
| || || || ||||| | | || ||||| || | || | ||| ||||
Sbjct 381000 CGATCGAGTCGTCCTTCATGGTGACCAGGAAACACGACGAAAGCTGCGGGTGAGGCGTTC 381059
Query 63667 CCGCATTAAATAAGGTAGGAGAAGCGTGCGTAAACCATTTTTCAGAAAGTAGATTGTACG 63726
| || || || | || || || ||||| ||||| | || || | || |||||||
Sbjct 381060 CGGCGTTGAAGAGCGTCGGCGAGGCGTGGGTAAAGTAGCGCTCGGACATGAGGTTGTACG 381119
Query 63727 TCT-CAATAGCTGAGTCTATATCCCATTGA---TGAATTCCTACTGCGACACGCATTAAC 63782
|| ||| | | || || || ||| || || || || ||||| ||||| | |
Sbjct 381120 ACTGCAAGA-CGCGCTCGATGTC---GTGACCGTGGATGCCGACGGCGACGCGCATGAGC 381175
Query 63783 ATGTGCTGAGGTCTTTCAACAATTTTGTTGTTTATTTTCAACAAGTAGGATTTTTCCAAA 63842
||||| || || | ||| | | ||| || || | ||||||||| || |
Sbjct 381176 ATGTGTTGCGGGCGTTCGGCGACCTTGCCGTCGATGCGAAGCAAGTAGGAGCGCTCGAGC 381235
Query 63843 GTTTTAAAACCAAAATAGTTGTATGAAAAGTCTCGTTCGTAAATAA 63888
|| || || ||||| |||||||| || || || ||||| ||||
Sbjct 381236 GTCTTGAAGCCAAAGTAGTTGTAGCCGAAATCGCGGTCGTAGATAA 381281
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 629816332492080
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |