Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Microbotryum_20saponariae_20[genbank_20GCA_5F900015975.1_202016-12- 23] 161 sequences; 29,508,937 total letters Query= NC_006639.1 Length=24748 Score E Sequences producing significant alignments: (Bits) Value seq99 176 7e-40 seq105 168 1e-37 seq87 154 2e-33 >seq99 Length=1308205 Score = 176 bits (194), Expect = 7e-40 Identities = 159/200 (80%), Gaps = 0/200 (0%) Strand=Plus/Plus Query 16457 CGAGATAACATCCAAGGAATCACCAAGCCAGCTATCCGTCGTCTGGCTCGTCGTGGTGGA 16516 || || |||||||| || ||||||||||| ||||| || ||||| |||||||||||||| Sbjct 1057274 CGCGACAACATCCAGGGTATCACCAAGCCCGCTATTCGCCGTCTCGCTCGTCGTGGTGGT 1057333 Query 16517 GTCAAGCGTGTCTCTGGATTGGTCTATGAAGAGATTCGTGATGTTTTGAAGATCTTCCTC 16576 ||||||||| |||| || ||| |||| ||||||| || | || ||||||||||||| Sbjct 1057334 GTCAAGCGTATCTCCGGCTTGATCTACGAAGAGACCCGAGGCGTCCTGAAGATCTTCCTT 1057393 Query 16577 AAGACCGTTATCCATGATGCTTTCCACTATACCGAGCACGCTAAACGTAAGACTGTCACC 16636 ||| ||| |||| ||| | || ||| ||||||||||| || || ||||| |||||| Sbjct 1057394 GAGAACGTCATCCGTGACTCCGTCACCTACACCGAGCACGCCAAGCGCAAGACCGTCACC 1057453 Query 16637 TCCATGGATATCGTCTATGC 16656 || ||||| ||||||| || Sbjct 1057454 TCGCTGGATGTCGTCTACGC 1057473 >seq105 Length=561522 Score = 168 bits (186), Expect = 1e-37 Identities = 179/236 (76%), Gaps = 0/236 (0%) Strand=Plus/Plus Query 16457 CGAGATAACATCCAAGGAATCACCAAGCCAGCTATCCGTCGTCTGGCTCGTCGTGGTGGA 16516 || || |||||||| || ||||||||||| || ||||| ||||| || ||||||||||| Sbjct 275583 CGTGACAACATCCAGGGTATCACCAAGCCGGCCATCCGCCGTCTCGCACGTCGTGGTGGT 275642 Query 16517 GTCAAGCGTGTCTCTGGATTGGTCTATGAAGAGATTCGTGATGTTTTGAAGATCTTCCTC 16576 || |||||| |||| || || |||| ||||||| || | ||| | |||||||||||| Sbjct 275643 GTGAAGCGTATCTCCGGTCTGATCTACGAAGAGACGCGAGGTGTGCTCAAGATCTTCCTC 275702 Query 16577 AAGACCGTTATCCATGATGCTTTCCACTATACCGAGCACGCTAAACGTAAGACTGTCACC 16636 ||| ||| |||| |||| | || ||| ||||||||||| || || ||||| |||||| Sbjct 275703 GAGAACGTGATCCGTGATTCGGTCACCTACACCGAGCACGCCAAGCGCAAGACGGTCACC 275762 Query 16637 TCCATGGATATCGTCTATGCATTGAAACGTCAAGGCCGTAAGATTTATGGTTTTGG 16692 || | ||| ||||||| || | || || ||||| | | | || ||||| || Sbjct 275763 TCGCTCGATGTCGTCTACGCCCTCAAGCGATCCGGCCGAACGCTCTACGGTTTCGG 275818 Score = 168 bits (186), Expect = 1e-37 Identities = 179/236 (76%), Gaps = 0/236 (0%) Strand=Plus/Minus Query 16457 CGAGATAACATCCAAGGAATCACCAAGCCAGCTATCCGTCGTCTGGCTCGTCGTGGTGGA 16516 || || |||||||| || ||||||||||| || ||||| ||||| || ||||||||||| Sbjct 350303 CGTGACAACATCCAGGGTATCACCAAGCCGGCCATCCGCCGTCTCGCACGTCGTGGTGGT 350244 Query 16517 GTCAAGCGTGTCTCTGGATTGGTCTATGAAGAGATTCGTGATGTTTTGAAGATCTTCCTC 16576 || |||||| |||| || || |||| ||||||| || | ||| | |||||||||||| Sbjct 350243 GTGAAGCGTATCTCCGGTCTGATCTACGAAGAGACGCGAGGTGTGCTCAAGATCTTCCTC 350184 Query 16577 AAGACCGTTATCCATGATGCTTTCCACTATACCGAGCACGCTAAACGTAAGACTGTCACC 16636 ||| ||| |||| |||| | || ||| ||||||||||| || || ||||| |||||| Sbjct 350183 GAGAACGTGATCCGTGATTCGGTCACCTACACCGAGCACGCCAAGCGCAAGACGGTCACC 350124 Query 16637 TCCATGGATATCGTCTATGCATTGAAACGTCAAGGCCGTAAGATTTATGGTTTTGG 16692 || | ||| ||||||| || | || || ||||| | | | || ||||| || Sbjct 350123 TCGCTCGATGTCGTCTACGCCCTCAAGCGATCCGGCCGAACGCTCTACGGTTTCGG 350068 >seq87 Length=2799476 Score = 154 bits (170), Expect = 2e-33 Identities = 154/200 (77%), Gaps = 0/200 (0%) Strand=Plus/Minus Query 16457 CGAGATAACATCCAAGGAATCACCAAGCCAGCTATCCGTCGTCTGGCTCGTCGTGGTGGA 16516 || ||||||||||| || ||||||||||| || ||||| ||||| || ||||||||||| Sbjct 671898 CGCGATAACATCCAGGGTATCACCAAGCCCGCCATCCGCCGTCTCGCGCGTCGTGGTGGT 671839 Query 16517 GTCAAGCGTGTCTCTGGATTGGTCTATGAAGAGATTCGTGATGTTTTGAAGATCTTCCTC 16576 ||||||||| |||| || | |||| || |||| ||| | ||| | |||||||| ||| Sbjct 671838 GTCAAGCGTATCTCGGGCCTCATCTACGAGGAGACTCGAGGTGTGCTCAAGATCTTTCTC 671779 Query 16577 AAGACCGTTATCCATGATGCTTTCCACTATACCGAGCACGCTAAACGTAAGACTGTCACC 16636 ||| ||| |||| ||| | || ||| ||||| ||||| || || ||||| |||||| Sbjct 671778 GAGAACGTCATCCGTGACTCGGTCACCTACACCGAACACGCCAAGCGCAAGACGGTCACC 671719 Query 16637 TCCATGGATATCGTCTATGC 16656 || | ||| |||| || || Sbjct 671718 TCGCTCGATGTCGTTTACGC 671699 Score = 154 bits (170), Expect = 2e-33 Identities = 154/200 (77%), Gaps = 0/200 (0%) Strand=Plus/Plus Query 16457 CGAGATAACATCCAAGGAATCACCAAGCCAGCTATCCGTCGTCTGGCTCGTCGTGGTGGA 16516 || ||||||||||| || ||||||||||| || ||||| ||||| || ||||||||||| Sbjct 731375 CGCGATAACATCCAGGGTATCACCAAGCCCGCCATCCGCCGTCTCGCGCGTCGTGGTGGT 731434 Query 16517 GTCAAGCGTGTCTCTGGATTGGTCTATGAAGAGATTCGTGATGTTTTGAAGATCTTCCTC 16576 ||||||||| |||| || | |||| || |||| ||| | ||| | |||||||| ||| Sbjct 731435 GTCAAGCGTATCTCGGGCCTCATCTACGAGGAGACTCGAGGTGTGCTCAAGATCTTTCTC 731494 Query 16577 AAGACCGTTATCCATGATGCTTTCCACTATACCGAGCACGCTAAACGTAAGACTGTCACC 16636 ||| ||| |||| ||| | || ||| ||||| ||||| || || ||||| |||||| Sbjct 731495 GAGAACGTCATCCGTGACTCGGTCACCTACACCGAACACGCCAAGCGCAAGACGGTCACC 731554 Query 16637 TCCATGGATATCGTCTATGC 16656 || | ||| |||| || || Sbjct 731555 TCGCTCGATGTCGTTTACGC 731574 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 79075052796573