Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Microbotryum_20saponariae_20[genbank_20GCA_5F900015975.1_202016-12-
23] 161 sequences; 29,508,937 total letters
Query= NC_008603.1
Length=321240
Score E
Sequences producing significant alignments: (Bits) Value
seq78 118 2e-21
seq104 91.5 3e-13
seq99 91.5 3e-13
>seq78
Length=484104
Score = 118 bits (130), Expect = 2e-21
Identities = 139/188 (74%), Gaps = 0/188 (0%)
Strand=Plus/Minus
Query 280170 GGTGTCATTGGACCCAATGGTGCGGGTAAGTCTACCCTAATCAAAGTCCTGACTGGCGAG 280229
||| || | || ||||| ||||| ||||| || ||||| ||||| || |||| ||||||
Sbjct 275782 GGTATCGTCGGCCCCAACGGTGCCGGTAAATCGACCCTGATCAAGCTCTTGACGGGCGAG 275723
Query 280230 ACCCAGGCCACTGAGGGGTCCGTTTGGAAGCATCCCAACATGCGGATGGCTTACGTCGCT 280289
||| | || || || || |||||| |||||| |||| | || ||||||||
Sbjct 275722 ACCGTGCCCGACGAAGGCAAGGTCGAGAAGCACCCCAACTTGCGTGTCGCGTACGTCGCC 275663
Query 280290 CAGCACGCTTTCCACCACATCGAGAACCACCTGGACATGACTCCTAACCAATACATTCAG 280349
|| ||||| ||||||||||||||| | ||||| || | ||| | | || ||||| |||
Sbjct 275662 CAACACGCGTTCCACCACATCGAGGAGCACCTTGAGAAGACGGCGATGCAGTACATCCAG 275603
Query 280350 TGGCGCTA 280357
||||| ||
Sbjct 275602 TGGCGTTA 275595
>seq104
Length=1213198
Score = 91.5 bits (100), Expect = 3e-13
Identities = 133/188 (71%), Gaps = 0/188 (0%)
Strand=Plus/Plus
Query 279699 GGTTCTCTGTCGGGTGGTTGGAAGATGAAGCTGGCCCTCACTCGCGCCATTCTACTGCGT 279758
|| || ||||| ||||| |||||||||||||| || | | || ||||| || |
Sbjct 510564 GGCTCGCTGTCCGGTGGATGGAAGATGAAGCTCGCGTTGGCGCGTGCCATCCTGTTCGAG 510623
Query 279759 GCCGATGTCCTACTGCTTGATGAGCCAACCAACCACATGGACACCACCAACGTAGCCTGG 279818
|||||| | || |||| || ||||| || |||||| ||||| ||||| ||||||
Sbjct 510624 GCCGATATTCTCTTGCTCGACGAGCCGACGAACCACTTGGACGTGCTTAACGTCGCCTGG 510683
Query 279819 CTAGTGTCCTACCTAACCAGTCTGAAGAATGTTTCTTCCCTCATTGTCTCTCACGACTCT 279878
|| | | |||||| || |||| || | ||| |||| ||||| ||||||||
Sbjct 510684 CTCGAGAACTACCTCACGTCGCTGACGACGTGCACGTCCATCATCGTCTCGCACGACTCG 510743
Query 279879 GGCTTCCT 279886
||||||||
Sbjct 510744 GGCTTCCT 510751
Score = 91.5 bits (100), Expect = 3e-13
Identities = 133/188 (71%), Gaps = 0/188 (0%)
Strand=Plus/Minus
Query 279699 GGTTCTCTGTCGGGTGGTTGGAAGATGAAGCTGGCCCTCACTCGCGCCATTCTACTGCGT 279758
|| || ||||| ||||| |||||||||||||| || | | || ||||| || |
Sbjct 517092 GGCTCGCTGTCCGGTGGATGGAAGATGAAGCTCGCGTTGGCGCGTGCCATCCTGTTCGAG 517033
Query 279759 GCCGATGTCCTACTGCTTGATGAGCCAACCAACCACATGGACACCACCAACGTAGCCTGG 279818
|||||| | || |||| || ||||| || |||||| ||||| ||||| ||||||
Sbjct 517032 GCCGATATTCTCTTGCTCGACGAGCCGACGAACCACTTGGACGTGCTTAACGTCGCCTGG 516973
Query 279819 CTAGTGTCCTACCTAACCAGTCTGAAGAATGTTTCTTCCCTCATTGTCTCTCACGACTCT 279878
|| | | |||||| || |||| || | ||| |||| ||||| ||||||||
Sbjct 516972 CTCGAGAACTACCTCACGTCGCTGACGACGTGCACGTCCATCATCGTCTCGCACGACTCG 516913
Query 279879 GGCTTCCT 279886
||||||||
Sbjct 516912 GGCTTCCT 516905
>seq99
Length=1308205
Score = 91.5 bits (100), Expect = 3e-13
Identities = 64/73 (88%), Gaps = 0/73 (0%)
Strand=Plus/Minus
Query 142503 AGCCCGGTTAGCTCAGTCGGTAGAGCGCTAGACTCTTAATCTAGTGGTCGTGGGTTCGAG 142562
|||||||||||||||||||||||||| | ||||||||||| || |||| |||||||||
Sbjct 817051 AGCCCGGTTAGCTCAGTCGGTAGAGCACCTGACTCTTAATCAGGTTGTCGCGGGTTCGAG 816992
Query 142563 CCCCACATCGGGC 142575
|||| ||| ||||
Sbjct 816991 CCCCGCATTGGGC 816979
Score = 89.7 bits (98), Expect = 1e-12
Identities = 63/72 (88%), Gaps = 0/72 (0%)
Strand=Plus/Minus
Query 142504 GCCCGGTTAGCTCAGTCGGTAGAGCGCTAGACTCTTAATCTAGTGGTCGTGGGTTCGAGC 142563
||||||||||||||||||||||||| | ||||||||||| || |||| ||||||||||
Sbjct 1280211 GCCCGGTTAGCTCAGTCGGTAGAGCACCTGACTCTTAATCAGGTTGTCGCGGGTTCGAGC 1280152
Query 142564 CCCACATCGGGC 142575
||| ||| ||||
Sbjct 1280151 CCCGCATTGGGC 1280140
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 1027834679765401
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |