Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Microbotryum_20saponariae_20[genbank_20GCA_5F900015975.1_202016-12- 23] 161 sequences; 29,508,937 total letters Query= NC_008724.1 Length=288047 Score E Sequences producing significant alignments: (Bits) Value seq69 223 6e-53 seq105 196 9e-45 seq88 192 1e-43 seq80 178 2e-39 seq56 172 1e-37 seq114 107 4e-18 seq78 93.3 8e-14 seq99 87.8 3e-12 >seq69 Length=186160 Score = 223 bits (246), Expect = 6e-53 Identities = 304/419 (73%), Gaps = 4/419 (1%) Strand=Plus/Minus Query 268246 CTGGAGCATTTTCCACATTGCTTCGACATAGTCCCGCGCATGGCCCCAATCGCGCTTTGC 268305 ||| ||||| ||||||| | ||||| ||||| ||||| || |||||||| ||||| || Sbjct 82566 CTGCAGCATCATCCACATACCCTCGACGTAGTCGCGCGCGTGTCCCCAATCACGCTTGGC 82507 Query 268306 GTCCATGTTCCCGAGGAACAGGCATTTCTGCTTGCCGAGCTTCA-CGCGTGCAAGACCGC 268364 |||||||| |||||| | ||||| | ||| | |||||| | | || || | | | | Sbjct 82506 CTCCATGTTGCCGAGGTAAAGGCAGTCCTGTTGACCGAGCGAGATCTCG-GCGACAGCTC 82448 Query 268365 GAGTGATTTTTCGGGTCACGAACGTCTCGCCACGTAGAGGGCTCTCGTGGTTGAAGAGGA 268424 | | || || | || || || || ||||| | ||| |||||||||||| | || Sbjct 82447 GGGAAATCTTCCTCGTGACAAAGGTGCGACCACGACGCGGGGACTCGTGGTTGAACAAGA 82388 Query 268425 TGCCGTTGCACGCGAACATGCCATATGCCTCACGGTAGTTCACGACCGTCCAGTATGCAA 268484 |||||||||| ||| ||||| | || | ||| ||||||||| ||| ||||| | || Sbjct 82387 TGCCGTTGCAGGCGTACATGTCGTACGACTCGCGGTAGTTCTTGACGATCCAGAAGGCGT 82328 Query 268485 ACATCTTTGCAACTGCGTACGGAGAACGTGGATGGAAGGGCGTCGTGATCTTTTGAGGGA 268544 ||| ||| || ||| |||| || ||||| || | |||||| ||||| ||||||| Sbjct 82327 ACAACTTGGCGACTCCGTAAGGCGAACGAGGGTAGAAGGGTGTCGTCTCGGATTGAGGGG 82268 Query 268545 TTTCTCGGACTTTGCCAAAGAGCTCGGAGGTCGATGCTTGGTAGAA-CTTTGTTGTTTTT 268603 |||| ||| ||||| | | |||||||||||| |||||||| || | || || Sbjct 82267 TTTCGACGACCTTGCCGTACAACTCGGAGGTCGAGGCTTGGTAAAAGCGGACGTGCTTGG 82208 Query 268604 TCGAGACCGCAGATTCGGATTGCCTCGAGCAAACGAAGAGTTCCCATGCCATCCACGTC 268662 || || |||||| ||||||| || ||||||| ||| || ||||| | ||| || ||||| Sbjct 82207 TCAAG-CCGCAGGTTCGGATCGCGTCGAGCAGACGCAGTGTTCCAAGGCCGTCGACGTC 82150 >seq105 Length=561522 Score = 196 bits (216), Expect = 9e-45 Identities = 179/226 (79%), Gaps = 0/226 (0%) Strand=Plus/Plus Query 68235 CCTCCGCGAAGGCGCAATACCAAGTGTAGCGTGGACTCTTTTTGGATGTTATAATCGGAG 68294 || || || ||||| | |||||||| ||||| ||||| ||||||||||| ||||| | | Sbjct 279977 CCACCACGCAGGCGGAGCACCAAGTGGAGCGTCGACTCCTTTTGGATGTTGTAATCCGCG 280036 Query 68295 AGTGTCCTCCCATCTTCTAACTGCTTCCCGGCGAATATGAGTCTTTGTTGGTCGGGTGGA 68354 || || | ||||| || | |||||| ||||| || ||||| | ||| |||||||| || Sbjct 280037 AGCGTGCGGCCATCCTCGAGCTGCTTGCCGGCAAAGATGAGACGTTGCTGGTCGGGGGGG 280096 Query 68355 ATGCCTTCCTTGTCTTGAATCTTTGCCTTGACGGCCTCGATGGTGTCTGCTGATTCTACT 68414 |||||||||||||| || ||||| | ||||||| ||||| ||||| | || || || Sbjct 280097 ATGCCTTCCTTGTCCTGGATCTTGGTCTTGACGTTGTCGATCGTGTCGGACGACTCGACC 280156 Query 68415 TCCAAGGTGATGGTTTTTCCCGTGAGGGTCTTGACGAATATCTGCA 68460 || | ||||||||| || |||||||||||||||||||| || |||| Sbjct 280157 TCGAGGGTGATGGTCTTGCCCGTGAGGGTCTTGACGAAGATTTGCA 280202 >seq88 Length=463073 Score = 192 bits (212), Expect = 1e-43 Identities = 275/382 (72%), Gaps = 4/382 (1%) Strand=Plus/Plus Query 268268 TCGACATAGTCCCGCGCATGGCCCCAATCGCGCTTTGCGTCCATGTTCCCGAGGAACAGG 268327 || || || || || || || |||||||| ||||| || |||||||| |||||| | ||| Sbjct 325771 TCAACGTAATCGCGGGCGTGTCCCCAATCACGCTTGGCCTCCATGTTACCGAGGTAAAGG 325830 Query 268328 CATTTCTGCTTGCCGAGCTTCA-CGCGTGCAAGACCGCGAGTGATTTTTCGGGTCACGAA 268386 || | ||| | |||||| | | || || | |||| | ||| |||| ||| || || Sbjct 325831 CAATCCTGTTGACCGAGCGAGATCTCG-GCGACGGCGCGCGAGATCTTTCTGGTGACAAA 325889 Query 268387 CGTCTCGCCACGTAGAGGGCTCTCGTGGTTGAAGAGGATGCCGTTGCACGCGAACATGCC 268446 || |||||| | ||| |||||||||||||||||| |||||||||||| ||||||| Sbjct 325890 GGTGCGGCCACGGCGGGGGGACTCGTGGTTGAAGAGGATACCGTTGCACGCGTACATGCC 325949 Query 268447 ATATGCCTCACGGTAGTTCACGACCGTCCAGTATGCAAACATCTTTGCAACTGCGTACGG 268506 || | ||| ||||||||| ||| ||||| | || ||| ||| || ||| |||| || Sbjct 325950 GTACGACTCGCGGTAGTTCTTGACGATCCAGAAGGCGTACAGCTTGGCGACTCCGTAGGG 326009 Query 268507 AGAACGTGGATGGAAGGGCGTCGTGATCTTTTGAGGGATTTCTCGGACTTTGCCAAAGAG 268566 || || || | |||||| ||||| |||||| | || ||| ||||| | | Sbjct 326010 CGAGCGAGGGTAGAAGGGGGTCGTCTCGGACTGAGGGGTCTCGACGACCTTGCCGTACAA 326069 Query 268567 CTCGGAGGTCGATGCTTGGTAGAA-CTTTGTTGTTTTTTCGAGACCGCAGATTCGGATTG 268625 ||| |||||||| ||||||||||| | || || || || ||||| | ||||| | Sbjct 326070 CTCCGAGGTCGAGGCTTGGTAGAAGCGGACGTGCTTGGTCAAG-CCGCAAGTGCGGATGG 326128 Query 268626 CCTCGAGCAAACGAAGAGTTCC 268647 | ||||| | ||| || ||||| Sbjct 326129 CGTCGAGTAGACGGAGTGTTCC 326150 >seq80 Length=1167844 Score = 178 bits (196), Expect = 2e-39 Identities = 176/228 (77%), Gaps = 0/228 (0%) Strand=Plus/Minus Query 68234 TCCTCCGCGAAGGCGCAATACCAAGTGTAGCGTGGACTCTTTTTGGATGTTATAATCGGA 68293 ||| || || || || | |||||||| ||||| ||||| || |||||||| || |||| Sbjct 547232 TCCGCCTCGGAGACGGAGCACCAAGTGCAGCGTCGACTCCTTCTGGATGTTGTAGTCGGC 547173 Query 68294 GAGTGTCCTCCCATCTTCTAACTGCTTCCCGGCGAATATGAGTCTTTGTTGGTCGGGTGG 68353 ||| || | ||||| || | |||||| || ||||| ||||| | ||||||||| || || Sbjct 547172 GAGCGTACGGCCATCCTCGAGCTGCTTGCCCGCGAAGATGAGACGTTGTTGGTCTGGGGG 547113 Query 68354 AATGCCTTCCTTGTCTTGAATCTTTGCCTTGACGGCCTCGATGGTGTCTGCTGATTCTAC 68413 |||||| |||||||| |||||||| ||||||||| ||||| ||||| | || || || Sbjct 547112 AATGCCCTCCTTGTCCTGAATCTTGGCCTTGACGTTGTCGATCGTGTCCGAGGACTCAAC 547053 Query 68414 TTCCAAGGTGATGGTTTTTCCCGTGAGGGTCTTGACGAATATCTGCAT 68461 || | ||||| || || || || | |||||||||||| || ||||| Sbjct 547052 CTCGAGCGTGATCGTCTTGCCTGTCAAGGTCTTGACGAAGATTTGCAT 547005 Score = 170 bits (188), Expect = 4e-37 Identities = 174/227 (77%), Gaps = 0/227 (0%) Strand=Plus/Minus Query 68235 CCTCCGCGAAGGCGCAATACCAAGTGTAGCGTGGACTCTTTTTGGATGTTATAATCGGAG 68294 || || || || |||| |||||||| ||||| ||||| || || ||||| ||||| | | Sbjct 789613 CCACCACGGAGACGCAGCACCAAGTGGAGCGTCGACTCCTTCTGAATGTTGTAATCCGCG 789554 Query 68295 AGTGTCCTCCCATCTTCTAACTGCTTCCCGGCGAATATGAGTCTTTGTTGGTCGGGTGGA 68354 || || | ||||| || | |||||| || ||||| || | || || ||||| || ||| Sbjct 789553 AGCGTGCGGCCATCCTCGAGCTGCTTGCCCGCGAAGATCAATCGCTGCTGGTCTGGGGGA 789494 Query 68355 ATGCCTTCCTTGTCTTGAATCTTTGCCTTGACGGCCTCGATGGTGTCTGCTGATTCTACT 68414 ||||||||||||||||||||||| | |||||| ||||| ||||| | || || || Sbjct 789493 ATGCCTTCCTTGTCTTGAATCTTGGTCTTGACATTGTCGATCGTGTCCGAGGACTCGACC 789434 Query 68415 TCCAAGGTGATGGTTTTTCCCGTGAGGGTCTTGACGAATATCTGCAT 68461 || | |||||| || || ||||| || ||||||||||| || ||||| Sbjct 789433 TCGAGGGTGATCGTCTTGCCCGTAAGCGTCTTGACGAAGATTTGCAT 789387 Score = 161 bits (178), Expect = 2e-34 Identities = 172/227 (76%), Gaps = 0/227 (0%) Strand=Plus/Minus Query 68235 CCTCCGCGAAGGCGCAATACCAAGTGTAGCGTGGACTCTTTTTGGATGTTATAATCGGAG 68294 || ||||| || || | |||||||| ||||| ||||| || || ||||| ||||| | | Sbjct 789157 CCACCGCGGAGACGGAGCACCAAGTGGAGCGTCGACTCCTTCTGAATGTTGTAATCCGCG 789098 Query 68295 AGTGTCCTCCCATCTTCTAACTGCTTCCCGGCGAATATGAGTCTTTGTTGGTCGGGTGGA 68354 || || | ||||| || | |||||| || || || ||||| | ||||||||| || ||| Sbjct 789097 AGCGTGCGGCCATCCTCGAGCTGCTTGCCCGCAAAGATGAGACGTTGTTGGTCTGGGGGA 789038 Query 68355 ATGCCTTCCTTGTCTTGAATCTTTGCCTTGACGGCCTCGATGGTGTCTGCTGATTCTACT 68414 || || ||||||||||| ||||| | |||||| || || ||||| | || || || Sbjct 789037 ATACCCTCCTTGTCTTGGATCTTGGTCTTGACATTGTCAATCGTGTCCGAGGACTCGACC 788978 Query 68415 TCCAAGGTGATGGTTTTTCCCGTGAGGGTCTTGACGAATATCTGCAT 68461 || | ||||||||| || || || | |||||||||||| || ||||| Sbjct 788977 TCGAGGGTGATGGTCTTGCCGGTCAAGGTCTTGACGAAGATTTGCAT 788931 Score = 158 bits (174), Expect = 2e-33 Identities = 171/227 (75%), Gaps = 0/227 (0%) Strand=Plus/Minus Query 68235 CCTCCGCGAAGGCGCAATACCAAGTGTAGCGTGGACTCTTTTTGGATGTTATAATCGGAG 68294 || || || || || | |||||||| ||||| ||||| || || ||||| ||||| | | Sbjct 789385 CCACCACGGAGACGGAGCACCAAGTGGAGCGTCGACTCCTTCTGAATGTTGTAATCCGCG 789326 Query 68295 AGTGTCCTCCCATCTTCTAACTGCTTCCCGGCGAATATGAGTCTTTGTTGGTCGGGTGGA 68354 || || | ||||| || | |||||| || || || ||||| | ||||||||| || ||| Sbjct 789325 AGCGTGCGGCCATCCTCGAGCTGCTTGCCCGCAAAGATGAGACGTTGTTGGTCTGGGGGA 789266 Query 68355 ATGCCTTCCTTGTCTTGAATCTTTGCCTTGACGGCCTCGATGGTGTCTGCTGATTCTACT 68414 || || ||||||||||| ||||| | |||||| || || ||||| | || || || Sbjct 789265 ATACCCTCCTTGTCTTGGATCTTGGTCTTGACATTGTCAATCGTGTCCGAGGACTCGACC 789206 Query 68415 TCCAAGGTGATGGTTTTTCCCGTGAGGGTCTTGACGAATATCTGCAT 68461 || | |||||| || || ||||| || ||||||||||| || ||||| Sbjct 789205 TCGAGGGTGATCGTCTTGCCCGTAAGCGTCTTGACGAAGATTTGCAT 789159 >seq56 Length=195491 Score = 172 bits (190), Expect = 1e-37 Identities = 173/225 (77%), Gaps = 0/225 (0%) Strand=Plus/Minus Query 68235 CCTCCGCGAAGGCGCAATACCAAGTGTAGCGTGGACTCTTTTTGGATGTTATAATCGGAG 68294 || || || ||||| | |||||||| || || ||||| ||||||||||| || |||| Sbjct 107528 CCACCTCGGAGGCGGAGCACCAAGTGGAGGGTCGACTCCTTTTGGATGTTGTAGTCGGCC 107469 Query 68295 AGTGTCCTCCCATCTTCTAACTGCTTCCCGGCGAATATGAGTCTTTGTTGGTCGGGTGGA 68354 | || | ||||| || | |||||| |||||||| ||||| | ||| ||||| || || Sbjct 107468 AAGGTGCGGCCATCCTCGAGCTGCTTGCCGGCGAAGATGAGACGTTGCTGGTCTGGGGGG 107409 Query 68355 ATGCCTTCCTTGTCTTGAATCTTTGCCTTGACGGCCTCGATGGTGTCTGCTGATTCTACT 68414 ||||||||||||||||| ||||| | ||||||| ||||| ||||| | || || || Sbjct 107408 ATGCCTTCCTTGTCTTGGATCTTGGTCTTGACGTTGTCGATCGTGTCGGACGACTCGACC 107349 Query 68415 TCCAAGGTGATGGTTTTTCCCGTGAGGGTCTTGACGAATATCTGC 68459 || | |||||| || || ||||| || ||||||||||| || ||| Sbjct 107348 TCGAGGGTGATCGTCTTGCCCGTAAGAGTCTTGACGAAGATTTGC 107304 >seq114 Length=2116821 Score = 107 bits (118), Expect = 4e-18 Identities = 121/159 (76%), Gaps = 5/159 (3%) Strand=Plus/Plus Query 9937 TGACGCCCGCCTTCTGGTACTCCGATACCCGGCGCTCGAAGAAGTTGGACTTGCCCTCGA 9996 |||| |||| ||| ||||| ||||| || || |||||||||||| | ||||||||||| Sbjct 1948056 TGAC-CCCGACTTTTGGTAATCCGAAACACGCTTCTCGAAGAAGTTTGTCTTGCCCTCGA 1948114 Query 9997 GGGAAATGAGCTCCATGAAGTCAAAGGGGTTCTCGGCG--CCAAACTGCTTGGGGTAACC 10054 | || || | | ||||||||| ||||||||||||| | ||| || |||||||| || Sbjct 1948115 GCGAGATCATGTTCATGAAGTCGAAGGGGTTCTCGGTGTTCCAGAC--CTTGGGGTTGCC 1948172 Query 10055 GAGTGCTGTGAAAATGCGGTCAGCCACGAACTCGATGTA 10093 | || || | ||||| || |||||||||||||| Sbjct 1948173 CAAGGCGACCAACAATCGGTCGGCGACGAACTCGATGTA 1948211 >seq78 Length=484104 Score = 93.3 bits (102), Expect = 8e-14 Identities = 130/180 (72%), Gaps = 2/180 (1%) Strand=Plus/Plus Query 224978 TACCGCCACTGGATGTACTGGTTGGGGGTCATGTCCAGGTGGTTCTCAATATGGTGGAAA 225037 || ||||||||||||||||| | | ||| | || ||||| | ||| || |||||||| Sbjct 275595 TAACGCCACTGGATGTACTGCATCGCCGTCTTCTCAAGGTGCTCCTCGATGTGGTGGAAC 275654 Query 225038 GCATGCTGGGCTACGTACGCCATGCGCATGTTGGGATGCTTCCACACAGAGCCCCGAGTC 225097 || || ||||| |||||||| | |||| |||||| |||||| || | || ||| Sbjct 275655 GCGTGTTGGGCGACGTACGCGACACGCAAGTTGGGGTGCTTCTCGACCTTG-CCTTCGTC 275713 Query 225098 -GGTTGTGCCTCGCCGGTGAGGACCTTGATGAGCGTAGTCTTGCCCGCACCATTGGGGCC 225156 || | |||||| || | || |||||| || || | || || ||||| |||||||| Sbjct 275714 GGGCACGGTCTCGCCCGTCAAGAGCTTGATCAGGGTCGATTTACCGGCACCGTTGGGGCC 275773 >seq99 Length=1308205 Score = 87.8 bits (96), Expect = 3e-12 Identities = 447/710 (63%), Gaps = 2/710 (0%) Strand=Plus/Minus Query 175975 CCTTGAACCCCCGATACCAAGGGGTCATTGGGAGCATCGTCTCGTTGTTAATGAGGCGCT 176034 ||||||| || || ||||||||| ||| || |||| |||| | || |||| Sbjct 699593 CCTTGAATCCACGGTACCAAGGGTGCATCGGTTCCATCTCCTCGCCCCTCATCTTGCGCC 699534 Query 176035 TCACATTGTCTACGATATCCTTGGGGTTGTAAGCCGGAATGTTAGTGCTAAATCCTGTTC 176094 | | ||| | || |||||| ||||||||||| || | | || |||| |||| Sbjct 699533 TTAAGTTGGCCACAATATCCGTGGGGTTGTAATTGGGCACCGACGAACTCCATCCCGTTC 699474 Query 176095 CTATTCCTGACGATCCATTCACCAGGAGAAACGGGATGGTGGGAACATAGTATTCCGGTT 176154 | || || ||| ||||| |||| | |||||| |||| | || | ||| | Sbjct 699473 CAATACCCTCCGAGCCATTGACCAAAGCCATGGGGATGATGGGGATGTACCAAGACGGCT 699414 Query 176155 CAATCCGGTCGCCGTCATCCTCGAGGTAGTTCAGCAGACGCTCGTCGGCCTTGTGGAAAA 176214 | || | | || ||||| | |||||| | |||| | || || || ||||| | Sbjct 699413 CGATGCTCTGACCATCATCGTTGAGGTATTCGAGCACGCTGTCATCAGCGGGATGGAAGA 699354 Query 176215 TATCCCGGGTGTTGGGGGACAGTTGTGTGAAGATATACCTAGCAGACGCACTGTCCTTGC 176274 || ||| ||| || | | |||||||| || | ||| || || ||| || | Sbjct 699353 CGCTACGCGTGATGGATGATACATTCGTGAAGATGTAACGAGCGGAAGCCGCGTCTTTAC 699294 Query 176275 CTCCGTGAAGGCGGGAACCGAATTGTCCGCGAGGAAGAAGCAAATTGATGTTATTCGAAC 176334 | || || || || | ||| ||||| ||| || || | |||| ||| || || | Sbjct 699293 CACCTTGCAGACGAGTACCAAATTGACCGTTCGGGTCGAGAATGTTGAGGTTGTTGGACC 699234 Query 176335 CCACGTAGTCTTGGGCCATTCCGACTATGGCGCCCTGGAGAGACGCCTCGCCGTGGTGAT 176394 | ||| | | ||| |||| |||| |||| ||| || | | | || ||||| || | Sbjct 699233 CGACGAACTGTTGCGCCAGGCCGATGATGGTGCCTTGCAAACTCATTTCACCGTGATGGT 699174 Query 176395 AGCCGGCGTTCTCACTTGTGTATCCGGCAAACTGCGCGACTTTGATTTCTTGTACGAGGT 176454 | | | || ||| ||| ||| | || || |||| ||||| || || | | Sbjct 699173 ACGCCGAGTGCTCGGCGACGTAACCGCCCAATTGTCCGACCTTGATCTCCTGCGTCAACT 699114 Query 176455 TGCGCTTCAACGCCGAGAACAGAATCTTCCGCTGCGAGGGCTTCAGACCATCGACGACCG 176514 ||||||| || ||||| | ||| || || || || | ||||| | ||| | Sbjct 699113 TGCGCTTGAAGCAACCGAACAAGACCTTGCGTTGACCCGGTTTGAACCCATCAATGACAG 699054 Query 176515 ACGGAATGGAACGCTCTACATCGTATCTTGAAAAAAGGATAAGGTCTTTGTTTATGAAAT 176574 | || || || ||| | ||| | || || ||||| | || ||||| || |||| Sbjct 699053 AGGGGATAGAGCGCACGTTGTCGGCCATCGAGAAGAGGATCAACTCCTTGTTGATAAAAT 698994 Query 176575 CCTCCACTGGAATCTTC-GTGAGCTTCTGGTCGAGCTGGTTGCCAGGCTCGAAATCAAGG 176633 |||| | || | |||| | || | |||||||| | |||| || |||| | || Sbjct 698993 CCTCGATCGGGA-CTTCGGCGATGCTGTGGTCGAGGTACGTGCCGGGGACGAAGCCTCGG 698935 Query 176634 AGCCACGTCTTCCGTTCGTCCGCCCGAGACTTGTTGAAAGACTTGTCAAT 176683 ||||| ||| || | ||| ||| ||||||||| | | ||||||| Sbjct 698934 AGCCATTCCTTGCGGTTGTCGGCCTTCTTCTTGTTGAAGGCCATGTCAAT 698885 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 921620545234920