Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Microbotryum_20saponariae_20[genbank_20GCA_5F900015975.1_202016-12-
23] 161 sequences; 29,508,937 total letters
Query= NC_009127.1
Length=295146
Score E
Sequences producing significant alignments: (Bits) Value
seq85 381 1e-100
seq114 120 6e-22
>seq85
Length=404085
Score = 381 bits (422), Expect = 1e-100
Identities = 852/1265 (67%), Gaps = 32/1265 (3%)
Strand=Plus/Plus
Query 244391 TCGAGGGCGGCGTAGTAGATGGTCTCGAAGATCATCTTGTTCATGTCGCGGGCCTTGCCG 244450
|||| ||||||| ||||||||||||||||||| |||||| | | ||| |||| |
Sbjct 380066 TCGATCGCGGCGTGGTAGATGGTCTCGAAGATCTGCTTGTTGAGCTTGCGCGCCTCGGGT 380125
Query 244451 CAGGTGAAGGGGATGCCCATCATCATGAAGACGTCGGCCAGTCCCTGCACGCCGATGCCG 244510
| ||| || || ||| | |||||| ||||||| || || ||||| |||||||||
Sbjct 380126 GAATCGAACGGCATCGCCAACGCCATGAACGCGTCGGCGAGACCTTGCACTCCGATGCCG 380185
Query 244511 ATGGGTCTGTGTCGCTTGTTGGAGCGCATGGCTTCGGGCACGGGGTAAAAGTTGCCGTCG 244570
||||| | ||| || ||||||| | || ||| ||||| || ||||| |||||
Sbjct 380186 ATGGGGCGGTGGCGGAAGTTGGAGTTCTGCGCCTCGATGACGGGATAGTAGTTGACGTCG 380245
Query 244571 ATCACCTTGTTGAGGTTGCGGGTGATCATGCGGACGACGTCGGCCAGCAGCTGAAAGTCG 244630
|| | ||| | |||| | || | |||||| ||| || | || |||||||
Sbjct 380246 ATGATGCGGTTCAAGTTGAAAGCGACGACCTTGACGACCTCGTGCAACTTCTTAAAGTCG 380305
Query 244631 TACTCGTAGGGATCCTCGGCGATGGTGATCCTCACAAACTCGTTGAGGGCGACGCTGGCC 244690
||| || | | || || ||| ||| ||| || | ||| ||||
Sbjct 380306 TACACGCCG---TTCT------TGATGAAGCTCGGCAACGCGAT-----CGA----GGCC 380347
Query 244691 AGGTTGCAGACGGCCACCTCCTCCGAGTTGGTGTACTGGACAATCTCGGTGCAGAGGTTA 244750
| |||||||||||| ||| || | | ||||| || ||||||||||| | |||
Sbjct 380348 AAGTTGCAGACGGCGCACTCATCGGGCGCCGAGTACTCGATGATCTCGGTGCACAAGTTC 380407
Query 244751 CTGCACTTGATGGTGCCCAGGTGCTGGTGATTGGACTTGGCGTTGCAGGCGTCCTTGTAG 244810
||||||| ||||| |||| || || || || || ||| |||||||||||||
Sbjct 380408 GACGACTTGATCGTGCCAAGGTTCTTTTGGTTCGATTTTTTGTTTGCGGCGTCCTTGTAG 380467
Query 244811 AGCATGAAGGGCCCCCCGGTCTCGAGCTGGGCGACGAGGA-CGCTGTTCCAGAGGTCCCT 244869
|||||||| || ||||| |||| |||||| | || | ||| || ||| || |
Sbjct 380468 AGCATGAACGGGTTGCCGGTTTCGACCTGGGCTTCAAGAATCGC-GTACCAAAGCTTTTG 380526
Query 244870 AGCCTTGACCGTCCTGCGAGCCTTGCCCTCTGCCTCGTAGCGGGTGTACAGGGCCTCGAA 244929
|| || |||| | || |||||| ||||| | ||| ||| |||
Sbjct 380527 CGCGGGGATCGTCTTCTTGGCGCGGCCCTCCTTTTCGTATTTCTCGAACAAGGCGCGGAA 380586
Query 244930 CTCGGGGCCCCAGACCTCGTCTAGGCCGGGGCACGACGCCGGGCACATGAGACTCCACTC 244989
||| ||| |||| |||| ||||||||| || ||||| | ||| ||||||
Sbjct 380587 CTCTTCGCCATAGACTTCGTGGAGGCCGGGGGCTTCAGCGGGGCAGAAGAGGGGCCACTC 380646
Query 244990 GCCGCCGTCCTTGACCCTCTGCATGAAGAGGTCGGGGATCCAGAGGGCCTGGAAGAGGTC 245049
|| | || ||| ||| | || ||| || || ||||| |||||||| || |||||| ||
Sbjct 380647 GCTGGCGGCCTCGACACGCTCCATAAACAGATCGGGAATCCAGAGCGCAAAGAAGAGATC 380706
Query 245050 CCTGGTCCTCTGCTCGTCCGAGCCAGTGTTCTTCCTCAGCTCCAAAAAGTCAAAGACGTC 245109
| | | ||| ||| ||| |||||| | || |||| || || ||||||||
Sbjct 380707 ACGAGCGCGGACCTCCTCCTTGCCGTGGTTCTTGCGAAGGTCCAGGAACTCGAAGACGTC 380766
Query 245110 GACGTGCCAGGGCTCCATGTAGACAGCGAGGGCGCCGGGCCGCTTGTTGCCTCCCTGGTC 245169
||||||| ||||| | ||||| |||| ||| ||||| ||||||||||| || |||||
Sbjct 380767 AGCGTGCCATGGCTCGAGGTAGATCGCGAAGGCTCCGGGACGCTTGTTGCCACCTTGGTC 380826
Query 245170 CACCATCCTCTCGAGCGCGTTGAAGATGCGCAGGGTAGGCACTATGCCGTTAGAGTGGCC 245229
|| | | || |||| ||| || || | || || |||||||| |||| |||
Sbjct 380827 GACGTAGCGCGCGGTGTTGTTGTAGACACGGAGCATGGGGACGATGCCGTTCGAGTAGCC 380886
Query 245230 GTTGGTGCCCTTGATGTAGGCGCCCTTGCCCCTGAGGTTGCTGATGGACATGCCTAGTCC 245289
||| ||||| |||||| | ||| | | | || |||| |||| || || | ||
Sbjct 380887 GTTCGTGCCGGCGATGTAAGAGCCGGTCGCGCGGATGTTGTGGATGCTCAAACCGATACC 380946
Query 245290 GCCGGCGTGCTTGGAGATGAGGGCGCAGCTCTTGATGGTGTCTGCTATGCCCTCCATGCT 245349
|||||| |||||||||||| ||||| |||||| ||||| ||||| || ||
Sbjct 380947 ACCGGCGGTCTTGGAGATGAGCGCGCACGTCTTGAGCGTGTCGTAGATGCCTTCGATCGA 381006
Query 245350 GTCCGACTTCATGTTGAGCAGAAAGCAGGAGGACAGCTGGGGCTTGGGGCTGCACGAGTT 245409
||| ||||||| ||| ||| || || || || ||||| || | || | | | |||
Sbjct 381007 GTCGTCCTTCATGGTGACCAGGAAACACGACGAAAGCTGCGGGTGAGGCGTTCCGGCGTT 381066
Query 245410 GAACAGAGTGGGGCTGGCGTGGGTAAAGTAGCGGCTC-GAGAGGAACCCGTACGTCTGGA 245468
||| || || || ||||||||||||||||| |||| || | || ||||| ||| |
Sbjct 381067 GAAGAGCGTCGGCGAGGCGTGGGTAAAGTAGC-GCTCGGACATGAGGTTGTACGACTGCA 381125
Query 245469 GCAGA-GCG-TCGATGTTGTCGCCGTGGATCTGCAGGGCGCACCTCATGAGGGTGTGCTG 245526
||| ||| ||||||| || |||||||| | |||| | |||||| |||| ||
Sbjct 381126 --AGACGCGCTCGATGTCGTGACCGTGGATGCCGACGGCGACGCGCATGAGCATGTGTTG 381183
Query 245527 -GGGCGTCTCGATGGGTCCCTCGGGTCCCT--TGAGCATGTAGGAGCGCTCGAGCGTCTT 245583
|||||| ||| | | || | ||| | |||| |||||||||||||||||||||
Sbjct 381184 CGGGCGT-TCG--GCGACCTTGCCGTCGATGCGAAGCAAGTAGGAGCGCTCGAGCGTCTT 381240
Query 245584 GAACCCAAAGTACGAGTAGCCAAAGTCGGCGTGGTGCCTGACGGCTGCGTCGAGTCTCTC 245643
||| |||||||| |||||| || ||| || || | ||||| || ||| | ||
Sbjct 381241 GAAGCCAAAGTAGTTGTAGCCGAAATCGCGGTCGTAGATAACGGCGCTGTTGAGGCGGTC 381300
Query 245644 GGCGT 245648
|||||
Sbjct 381301 GGCGT 381305
>seq114
Length=2116821
Score = 120 bits (132), Expect = 6e-22
Identities = 188/263 (71%), Gaps = 11/263 (4%)
Strand=Plus/Minus
Query 42744 GGCGCCTTCGCCTCCATCTTCTGGCTCAAGCAGAAGGTGTCGATGCCCGGACTCACCTTC 42803
||| | || || |||||||||||||||||| || | | |||||||||| | ||||||
Sbjct 1948547 GGCTCGTTTGCTTCCATCTTCTGGCTCAAGAAGCGTGGCTTGATGCCCGGATTGACCTTC 1948488
Query 42804 TCGAACGAACTCATCAGCAGGGACGAGGGGCTGCATAGGGACTTTGCCTGCCTCCTGTTC 42863
|| ||||| ||||| | |||||||| || || | |||||||| |||||| |||||
Sbjct 1948487 TCCAACGAGCTCATTTCGCGTGACGAGGGCCTTCACACCGACTTTGCTTGCCTCTTGTTC 1948428
Query 42864 TCGAGCCACCTCAGGCACAAGCCCTC-GAAGGAGCGGGTCCGGGCCATCATCACGGAGGC 42922
|| ||||||| || ||| |||| || ||| | |||||| | ||| ||
Sbjct 1948427 TC---CCACCTCGAGC-GAAGACCTCACCCCGACACCGTCGCGCTCATCATTAAGGAAGC 1948372
Query 42923 CGTGGAGATCGAGAAGGAGTTCCTCACGCAGTCGCTGCC---CGTGTCCCTGGTCGGCAT 42979
||| |||||||||||||| ||| | || || | || || || || || |||||||
Sbjct 1948371 CGTCGAGATCGAGAAGGAATTCTTGACCGAGGCTCTTCCTTGCG-GT--TTGATCGGCAT 1948315
Query 42980 GAACCACGACCTCATGTGCAAGT 43002
||| | | ||||||||| |||
Sbjct 1948314 GAATGCCAAGCTCATGTGCCAGT 1948292
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 944337299517360
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |