Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Microbotryum_20saponariae_20[genbank_20GCA_5F900015975.1_202016-12-
23] 161 sequences; 29,508,937 total letters
Query= NC_009899.1
Length=344691
Score E
Sequences producing significant alignments: (Bits) Value
seq69 107 4e-18
>seq69
Length=186160
Score = 107 bits (118), Expect = 4e-18
Identities = 252/373 (68%), Gaps = 12/373 (3%)
Strand=Plus/Plus
Query 68401 TTTGCCAAGCGTCTTCGTCAGAGTTGTATGGAAAAGTGCAAGAAATTCCTCAGACGGAAA 68460
||| |||||| || | || |||||||| || || || |||| ||||| | || |
Sbjct 82223 TTTACCAAGCCTCGACCTCCGAGTTGTACGGCAAGGTCGTCGAAACCCCTCAATCCGAGA 82282
Query 68461 ATACTCCGTTTTATCCTCGAAGCCCTTACGGTGTTGCAAAGTTGTACGCTTATTGGATCT 68520
|| || || || ||||| |||||||| || || ||||||||||| | ||||||
Sbjct 82283 CGACACCCTTCTACCCTCGTTCGCCTTACGGAGTCGCCAAGTTGTACGCCTTCTGGATCG 82342
Query 68521 GTAAAAATTACCGTGAGTCGTATAACATGTATGTATGCAACTCGATTTGTTTCAATCACG 68580
|| || ||||| |||||||| ||||||| | |||||| || | ||||| |||
Sbjct 82343 TCAAGAACTACCGCGAGTCGTACGACATGTACGCCTGCAACGGCATCTTGTTCAACCAC- 82401
Query 68581 AGAGTCCCAAC--AGAGGCCATCAGTTCGTGACTCGTAAAA--TCACGAAGGTGGTCGCG 68636
||||||| | | || | || || || | || | || ||| | |||||
Sbjct 82402 -GAGTCCCCGCGTCGTGGTCGCACCTTTGTCACGAGGAAGATTTCCCGA--GCTGTCGCC 82458
Query 68637 AATATTTTCAATGGTGTCGAAA--AATGCATGTATCTCGGTAATATAGATGCCAAAAGAG 68694
| | | || | | ||| | | | ||| | || ||||| || || || ||||| | |
Sbjct 82459 GAGA-TCTCGCTCG-GTCAACAGGACTGCCTTTACCTCGGCAACATGGAGGCCAAGCGTG 82516
Query 68695 ATTGGGGATATGCGAAGGATTACGTAGAAGCAATGTGGTTGATGCTGCAACAAGATACTC 68754
|||||||| | ||| || ||||| || | |||||| |||||||||| ||||| || |
Sbjct 82517 ATTGGGGACACGCGCGCGACTACGTCGAGGGTATGTGGATGATGCTGCAGCAAGACACCC 82576
Query 68755 CGGATGACTATGT 68767
| || |||| |||
Sbjct 82577 CCGACGACTTTGT 82589
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 1102877724965350
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |