Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Microbotryum_20saponariae_20[genbank_20GCA_5F900015975.1_202016-12- 23] 161 sequences; 29,508,937 total letters Query= NC_010191.2 Length=186713 Score E Sequences producing significant alignments: (Bits) Value seq85 178 2e-39 seq99 104 3e-17 seq88 93.3 5e-14 >seq85 Length=404085 Score = 178 bits (196), Expect = 2e-39 Identities = 562/860 (65%), Gaps = 12/860 (1%) Strand=Plus/Plus Query 114470 GCGATTGACGCCAGATTACACACAGAGGTCTCATCCTTATCAGTGTACTCTATAATTTCC 114529 ||||| || |||| || || || | | |||||| | | |||||| || || || Sbjct 380336 GCGATCGAGGCCAAGTTGCAGACGGCGCACTCATCGGGCGCCGAGTACTCGATGATCTCG 380395 Query 114530 GTACACAAATTTGAACTCTTAATGGTGCCCAAGTTCTTTTGATTTGACTTTGTGTTACAC 114589 || ||||| || || ||| || ||||| | ||||||||| || || ||| |||| Sbjct 380396 GTGCACAAGTTCGACGACTTGATCGTGCCAAGGTTCTTTTGGTTCGATTTTTTGTTTGCG 380455 Query 114590 GCATCCTTGTAAAGCATGTATGGCGTCCCCGTCTCCGTTTGGGACTTGAGAATAGCCTTC 114649 || |||||||| |||||| | || | || || || |||| | ||||| || | | Sbjct 380456 GCGTCCTTGTAGAGCATGAACGGGTTGCCGGTTTCGACCTGGGCTTCAAGAATCGCGTAC 380515 Query 114650 CAGA-CATCGGCGGCTGGCACAGTGGCGTTGGCTCGCCCCTCCTCCTCGTACTTTGTGTA 114708 || | | | ||| | || | || ||||| || ||||||| ||||| || | | Sbjct 380516 CAAAGCTTTTGCG-CGGGGATCGTCTTCTTGGCGCGGCCCTCCTTTTCGTATTTCTCGAA 380574 Query 114709 GAGGGCTTCAAACTCTTCACCCACGGCCTCTGAGAGCCCTGGTGCCTTATCTGGGCAGAA 114768 | ||| |||||||| || | | || ||| || || || | | | |||||||| Sbjct 380575 CAAGGCGCGGAACTCTTCGCCATAGACTTCGTGGAGGCCGGGGGCTTCAGCGGGGCAGAA 380634 Query 114769 GAGAGACCATTGACCACCCTCCTCAACACGCTTCATGAAGAGGTCTGGGATCCAGAGAGC 114828 ||| | ||| | | | |||| ||||||| ||| || || || || |||||||| || Sbjct 380635 GAGGGGCCACTCGCTGGCGGCCTCGACACGCTCCATAAACAGATCGGGAATCCAGAGCGC 380694 Query 114829 TGAGAAGAGATCCCGACAGCGAGCTTCTTCATCCCCCTGATTGAGACGCAACTCCAAAAA 114888 |||||||||| ||| ||| | || || | || || || || | |||| || Sbjct 380695 AAAGAAGAGATCACGAGCGCGGACCTCCTCCTTGCCGTGGTTCTTGCGAAGGTCCAGGAA 380754 Query 114889 GTCCATGATATCCGCGTGCCACGGTTCCAGGTACACCGCGATTGACCCCTTACG---ACG 114945 || | || || |||||||| || || ||||| | ||||| | || ||| Sbjct 380755 CTCGAAGACGTCAGCGTGCCATGGCTCGAGGTAGATCGCGAAGGCTCCGGGACGCTTGTT 380814 Query 114946 ACCAGCCTGGTTTACATACCTCGCTGTGGCATTAAATACGCGAAGCATTGGAATGATACC 115005 ||| | |||| || || | ||| ||| || | || || ||||| || | ||| || Sbjct 380815 GCCACCTTGGTCGACGTAGCGCGCGGTGTTGTTGTAGACACGGAGCATGGGGACGATGCC 380874 Query 115006 ATCAGATTGGCCATTTGT-CCCCCGA-ATACGAGACTTATTGGCTCTGACATCATGGATG 115063 | || | ||| || || || ||| || ||| | | || | || | |||||| Sbjct 380875 GTTCGAGTAGCCGTTCGTGCCGGCGATGTAAGAGCC--GGTCGCGCGGATGTTGTGGATG 380932 Query 115064 TGCATACCAATACCCCCTGCCCACTTTGAGATTTGCGCGCACTCCGTGAGACTGCCGTAG 115123 || ||| ||||| || || ||| ||||| |||||||| | |||| || ||||| Sbjct 380933 CTCAAACCGATACCACCGGCGGTCTTGGAGATGAGCGCGCACGTCTTGAGCGTGTCGTAG 380992 Query 115124 ATCCCGTCGATCGAGTCACCCTTATTTGCGATAAGGAAGCAGCTCGACATTTGTGGCCTT 115183 || || ||||||||||| |||| | | || ||||| || ||| | || || Sbjct 380993 ATGCCTTCGATCGAGTCGTCCTTCATGGTGACCAGGAAACACGACGAAAGCTGCGGGTGA 381052 Query 115184 GGTGTACCAGCGTTGAAGAGGGTTGGTGTCGCGTGGATGAACATACCTTGGGACATCTTA 115243 || || || ||||||||||| || || | |||||| | || | | |||||| Sbjct 381053 GGCGTTCCGGCGTTGAAGAGCGTCGGCGAGGCGTGGGTAAAGTAGCGCTCGGACATGAGG 381112 Query 115244 TCGTAGGTCTCCAAGACG-GCGGGAATGTCTTCCCCGTGAATACCGATCGAGACCCGCAT 115302 | ||| | || ||||||| || | ||||| | ||||| || |||| | ||| ||||| Sbjct 381113 TTGTACGACTGCAAGACGCGCTCG-ATGTCGTGACCGTGGATGCCGACGGCGACGCGCAT 381171 Query 115303 AAACATGTATTG-GGGTGTT 115321 | ||||| ||| ||| ||| Sbjct 381172 GAGCATGTGTTGCGGGCGTT 381191 >seq99 Length=1308205 Score = 104 bits (114), Expect = 3e-17 Identities = 334/506 (66%), Gaps = 23/506 (5%) Strand=Plus/Minus Query 172526 CCCTTGGAAGCCTTGATGATTGGTGTCACCA--TTGAGACCACAAACCC--CAACTTGAG 172581 ||||||| ||||||| ||| || || | | | ||| | | || ||| || ||||| Sbjct 698688 CCCTTGGTCGCCTTGACGATGGGGGTGATGAACTCGAG-CAAGAAGCCCTTCAGTTTGAG 698630 Query 172582 GAGGGATGGCCAGAAGTAGTGGATCATATTCAGGATGAGACCCTTAATGTGTGAACCATC 172641 | ||| || | |||| | || | || | ||| |||||||| ||||| || ||||| Sbjct 698629 CAAGGAAGGGAACCAGTAATCGAGGAAGTTGATGATCAGACCCTTGATGTGCGATCCATC 698570 Query 172642 GTTATCCGCATCCGTCATAATCATAAGCCGACCATAGCGAAGCTCGGAAACATCTTGATA 172701 || |||| ||| | ||| ||||| ||| || || || ||| | || || || Sbjct 698569 GTGATCCTGATCGGCCATGATCATGAGCTTGCCGTAACGGAGCGAGTCGACGTCGGTGTA 698510 Query 172702 CTCCTTACCCTGTTGAAGACCCAAGATCTTCTTGAGATCATTGAACTCTTGGTTTGATGT 172761 | || ||||| || | |||||||||| ||||| | ||||| ||| | | || Sbjct 698509 GACTTTGCCCTGCTGCAAGCCCAAGATCTGCTTGATCGC-TTGAA-TCTCGACATTATC- 698453 Query 172762 GAGTTGCGCCA---CTGAAGCATCGCGGACATTTTTACACTTCCCACGGAGAGGGAACAC 172818 ||| | || | | || || || || || |||| || || | |||||| || Sbjct 698452 GAGGAGGGCTTTGCCCGCCGCTTCACGCACGTTGAGCAACTTTCCTCGCAAAGGGAAGAC 698393 Query 172819 ACCGTAGTGATCACGACCAACCACAGAAAGACCAGCAACTGCGAGGGTCTTCGCGGAATC 172878 ||| |||| || ||||| || || | ||||| | || ||||| | ||| |||||||| Sbjct 698392 ACCATAGTTGTCTCGACCGACGACGGCCAGACCCGACACGGCGAGCGCCTTGGCGGAATC 698333 Query 172879 ACCCTCCGTCACGATGAGCGTACACTTTCCAGATT-GTGCC--GTCCCCGCCTTGTTCGC 172935 || || |||| ||||||||| ||||| ||| || || || || || ||||| || Sbjct 698332 TCCTTCGGTCAAGATGAGCGTGCACTTG---GATCCGTTCCTCGTTCCAGCGTTGTTTGC 698276 Query 172936 ATCGTCCAACTTGGGAATACCAGTAATTTTGGA---CTTGCGGGCACCATCTGTCTTCTT 172992 ||| || | |||| | ||| || || || |||| | || || |||||||| Sbjct 698275 ATCCTCGAGCTTGACGAGACCCGTGATACGCGATCGCTTGTGT---CCGTCCGTCTTCTT 698219 Query 172993 GAGTTCCTTCATCTCCTTGAACTTGG 173018 ||| || || ||||||||||| Sbjct 698218 GAGCATCTGGTCCTGCTTGAACTTGG 698193 >seq88 Length=463073 Score = 93.3 bits (102), Expect = 5e-14 Identities = 138/196 (70%), Gaps = 0/196 (0%) Strand=Plus/Minus Query 8526 TATCAAGCATCTTCCTCGGAGATGTTTGGTAAAGTTAGGGAATCCCCTCAAAATGAGGAG 8585 || ||||| || |||||||| ||| || || || || ||||||| ||| | Sbjct 326090 TACCAAGCCTCGACCTCGGAGTTGTACGGCAAGGTCGTCGAGACCCCTCAGTCCGAGACG 326031 Query 8586 ACACCCTTCTATCCACGATCCGTCTATGGCGTCTCAAAGGTTGCGGCACATTGGCTCGTG 8645 || |||||||| || || || ||| || ||| | ||| | || ||| |||| Sbjct 326030 ACCCCCTTCTACCCTCGCTCGCCCTACGGAGTCGCCAAGCTGTACGCCTTCTGGATCGTC 325971 Query 8646 AAGAATTACCGAGAATCCTATGGTCTCTTTGCGTGCTCCGGTATTCTCTTCAACCACGAG 8705 ||||| ||||| || || || || | | |||||| |||||| ||||||||||||||| Sbjct 325970 AAGAACTACCGCGAGTCGTACGGCATGTACGCGTGCAACGGTATCCTCTTCAACCACGAG 325911 Query 8706 TCACCCCGTCGTGGCC 8721 || ||||| ||||||| Sbjct 325910 TCCCCCCGCCGTGGCC 325895 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 597352397825880