Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Microbotryum_20saponariae_20[genbank_20GCA_5F900015975.1_202016-12-
23] 161 sequences; 29,508,937 total letters
Query= NC_010191.2
Length=186713
Score E
Sequences producing significant alignments: (Bits) Value
seq85 178 2e-39
seq99 104 3e-17
seq88 93.3 5e-14
>seq85
Length=404085
Score = 178 bits (196), Expect = 2e-39
Identities = 562/860 (65%), Gaps = 12/860 (1%)
Strand=Plus/Plus
Query 114470 GCGATTGACGCCAGATTACACACAGAGGTCTCATCCTTATCAGTGTACTCTATAATTTCC 114529
||||| || |||| || || || | | |||||| | | |||||| || || ||
Sbjct 380336 GCGATCGAGGCCAAGTTGCAGACGGCGCACTCATCGGGCGCCGAGTACTCGATGATCTCG 380395
Query 114530 GTACACAAATTTGAACTCTTAATGGTGCCCAAGTTCTTTTGATTTGACTTTGTGTTACAC 114589
|| ||||| || || ||| || ||||| | ||||||||| || || ||| ||||
Sbjct 380396 GTGCACAAGTTCGACGACTTGATCGTGCCAAGGTTCTTTTGGTTCGATTTTTTGTTTGCG 380455
Query 114590 GCATCCTTGTAAAGCATGTATGGCGTCCCCGTCTCCGTTTGGGACTTGAGAATAGCCTTC 114649
|| |||||||| |||||| | || | || || || |||| | ||||| || | |
Sbjct 380456 GCGTCCTTGTAGAGCATGAACGGGTTGCCGGTTTCGACCTGGGCTTCAAGAATCGCGTAC 380515
Query 114650 CAGA-CATCGGCGGCTGGCACAGTGGCGTTGGCTCGCCCCTCCTCCTCGTACTTTGTGTA 114708
|| | | | ||| | || | || ||||| || ||||||| ||||| || | |
Sbjct 380516 CAAAGCTTTTGCG-CGGGGATCGTCTTCTTGGCGCGGCCCTCCTTTTCGTATTTCTCGAA 380574
Query 114709 GAGGGCTTCAAACTCTTCACCCACGGCCTCTGAGAGCCCTGGTGCCTTATCTGGGCAGAA 114768
| ||| |||||||| || | | || ||| || || || | | | ||||||||
Sbjct 380575 CAAGGCGCGGAACTCTTCGCCATAGACTTCGTGGAGGCCGGGGGCTTCAGCGGGGCAGAA 380634
Query 114769 GAGAGACCATTGACCACCCTCCTCAACACGCTTCATGAAGAGGTCTGGGATCCAGAGAGC 114828
||| | ||| | | | |||| ||||||| ||| || || || || |||||||| ||
Sbjct 380635 GAGGGGCCACTCGCTGGCGGCCTCGACACGCTCCATAAACAGATCGGGAATCCAGAGCGC 380694
Query 114829 TGAGAAGAGATCCCGACAGCGAGCTTCTTCATCCCCCTGATTGAGACGCAACTCCAAAAA 114888
|||||||||| ||| ||| | || || | || || || || | |||| ||
Sbjct 380695 AAAGAAGAGATCACGAGCGCGGACCTCCTCCTTGCCGTGGTTCTTGCGAAGGTCCAGGAA 380754
Query 114889 GTCCATGATATCCGCGTGCCACGGTTCCAGGTACACCGCGATTGACCCCTTACG---ACG 114945
|| | || || |||||||| || || ||||| | ||||| | || |||
Sbjct 380755 CTCGAAGACGTCAGCGTGCCATGGCTCGAGGTAGATCGCGAAGGCTCCGGGACGCTTGTT 380814
Query 114946 ACCAGCCTGGTTTACATACCTCGCTGTGGCATTAAATACGCGAAGCATTGGAATGATACC 115005
||| | |||| || || | ||| ||| || | || || ||||| || | ||| ||
Sbjct 380815 GCCACCTTGGTCGACGTAGCGCGCGGTGTTGTTGTAGACACGGAGCATGGGGACGATGCC 380874
Query 115006 ATCAGATTGGCCATTTGT-CCCCCGA-ATACGAGACTTATTGGCTCTGACATCATGGATG 115063
| || | ||| || || || ||| || ||| | | || | || | ||||||
Sbjct 380875 GTTCGAGTAGCCGTTCGTGCCGGCGATGTAAGAGCC--GGTCGCGCGGATGTTGTGGATG 380932
Query 115064 TGCATACCAATACCCCCTGCCCACTTTGAGATTTGCGCGCACTCCGTGAGACTGCCGTAG 115123
|| ||| ||||| || || ||| ||||| |||||||| | |||| || |||||
Sbjct 380933 CTCAAACCGATACCACCGGCGGTCTTGGAGATGAGCGCGCACGTCTTGAGCGTGTCGTAG 380992
Query 115124 ATCCCGTCGATCGAGTCACCCTTATTTGCGATAAGGAAGCAGCTCGACATTTGTGGCCTT 115183
|| || ||||||||||| |||| | | || ||||| || ||| | || ||
Sbjct 380993 ATGCCTTCGATCGAGTCGTCCTTCATGGTGACCAGGAAACACGACGAAAGCTGCGGGTGA 381052
Query 115184 GGTGTACCAGCGTTGAAGAGGGTTGGTGTCGCGTGGATGAACATACCTTGGGACATCTTA 115243
|| || || ||||||||||| || || | |||||| | || | | ||||||
Sbjct 381053 GGCGTTCCGGCGTTGAAGAGCGTCGGCGAGGCGTGGGTAAAGTAGCGCTCGGACATGAGG 381112
Query 115244 TCGTAGGTCTCCAAGACG-GCGGGAATGTCTTCCCCGTGAATACCGATCGAGACCCGCAT 115302
| ||| | || ||||||| || | ||||| | ||||| || |||| | ||| |||||
Sbjct 381113 TTGTACGACTGCAAGACGCGCTCG-ATGTCGTGACCGTGGATGCCGACGGCGACGCGCAT 381171
Query 115303 AAACATGTATTG-GGGTGTT 115321
| ||||| ||| ||| |||
Sbjct 381172 GAGCATGTGTTGCGGGCGTT 381191
>seq99
Length=1308205
Score = 104 bits (114), Expect = 3e-17
Identities = 334/506 (66%), Gaps = 23/506 (5%)
Strand=Plus/Minus
Query 172526 CCCTTGGAAGCCTTGATGATTGGTGTCACCA--TTGAGACCACAAACCC--CAACTTGAG 172581
||||||| ||||||| ||| || || | | | ||| | | || ||| || |||||
Sbjct 698688 CCCTTGGTCGCCTTGACGATGGGGGTGATGAACTCGAG-CAAGAAGCCCTTCAGTTTGAG 698630
Query 172582 GAGGGATGGCCAGAAGTAGTGGATCATATTCAGGATGAGACCCTTAATGTGTGAACCATC 172641
| ||| || | |||| | || | || | ||| |||||||| ||||| || |||||
Sbjct 698629 CAAGGAAGGGAACCAGTAATCGAGGAAGTTGATGATCAGACCCTTGATGTGCGATCCATC 698570
Query 172642 GTTATCCGCATCCGTCATAATCATAAGCCGACCATAGCGAAGCTCGGAAACATCTTGATA 172701
|| |||| ||| | ||| ||||| ||| || || || ||| | || || ||
Sbjct 698569 GTGATCCTGATCGGCCATGATCATGAGCTTGCCGTAACGGAGCGAGTCGACGTCGGTGTA 698510
Query 172702 CTCCTTACCCTGTTGAAGACCCAAGATCTTCTTGAGATCATTGAACTCTTGGTTTGATGT 172761
| || ||||| || | |||||||||| ||||| | ||||| ||| | | ||
Sbjct 698509 GACTTTGCCCTGCTGCAAGCCCAAGATCTGCTTGATCGC-TTGAA-TCTCGACATTATC- 698453
Query 172762 GAGTTGCGCCA---CTGAAGCATCGCGGACATTTTTACACTTCCCACGGAGAGGGAACAC 172818
||| | || | | || || || || || |||| || || | |||||| ||
Sbjct 698452 GAGGAGGGCTTTGCCCGCCGCTTCACGCACGTTGAGCAACTTTCCTCGCAAAGGGAAGAC 698393
Query 172819 ACCGTAGTGATCACGACCAACCACAGAAAGACCAGCAACTGCGAGGGTCTTCGCGGAATC 172878
||| |||| || ||||| || || | ||||| | || ||||| | ||| ||||||||
Sbjct 698392 ACCATAGTTGTCTCGACCGACGACGGCCAGACCCGACACGGCGAGCGCCTTGGCGGAATC 698333
Query 172879 ACCCTCCGTCACGATGAGCGTACACTTTCCAGATT-GTGCC--GTCCCCGCCTTGTTCGC 172935
|| || |||| ||||||||| ||||| ||| || || || || || ||||| ||
Sbjct 698332 TCCTTCGGTCAAGATGAGCGTGCACTTG---GATCCGTTCCTCGTTCCAGCGTTGTTTGC 698276
Query 172936 ATCGTCCAACTTGGGAATACCAGTAATTTTGGA---CTTGCGGGCACCATCTGTCTTCTT 172992
||| || | |||| | ||| || || || |||| | || || ||||||||
Sbjct 698275 ATCCTCGAGCTTGACGAGACCCGTGATACGCGATCGCTTGTGT---CCGTCCGTCTTCTT 698219
Query 172993 GAGTTCCTTCATCTCCTTGAACTTGG 173018
||| || || |||||||||||
Sbjct 698218 GAGCATCTGGTCCTGCTTGAACTTGG 698193
>seq88
Length=463073
Score = 93.3 bits (102), Expect = 5e-14
Identities = 138/196 (70%), Gaps = 0/196 (0%)
Strand=Plus/Minus
Query 8526 TATCAAGCATCTTCCTCGGAGATGTTTGGTAAAGTTAGGGAATCCCCTCAAAATGAGGAG 8585
|| ||||| || |||||||| ||| || || || || ||||||| ||| |
Sbjct 326090 TACCAAGCCTCGACCTCGGAGTTGTACGGCAAGGTCGTCGAGACCCCTCAGTCCGAGACG 326031
Query 8586 ACACCCTTCTATCCACGATCCGTCTATGGCGTCTCAAAGGTTGCGGCACATTGGCTCGTG 8645
|| |||||||| || || || ||| || ||| | ||| | || ||| ||||
Sbjct 326030 ACCCCCTTCTACCCTCGCTCGCCCTACGGAGTCGCCAAGCTGTACGCCTTCTGGATCGTC 325971
Query 8646 AAGAATTACCGAGAATCCTATGGTCTCTTTGCGTGCTCCGGTATTCTCTTCAACCACGAG 8705
||||| ||||| || || || || | | |||||| |||||| |||||||||||||||
Sbjct 325970 AAGAACTACCGCGAGTCGTACGGCATGTACGCGTGCAACGGTATCCTCTTCAACCACGAG 325911
Query 8706 TCACCCCGTCGTGGCC 8721
|| ||||| |||||||
Sbjct 325910 TCCCCCCGCCGTGGCC 325895
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 597352397825880
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |