Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Microbotryum_20saponariae_20[genbank_20GCA_5F900015975.1_202016-12- 23] 161 sequences; 29,508,937 total letters Query= NC_011183.1 Length=154641 Score E Sequences producing significant alignments: (Bits) Value seq85 286 3e-72 >seq85 Length=404085 Score = 286 bits (316), Expect = 3e-72 Identities = 743/1125 (66%), Gaps = 27/1125 (2%) Strand=Plus/Minus Query 93718 TACGATTACTTTGCCTTCAAAACTCTGGAGAAGTCGTACCTCCTCAAGATGGATGGCAGG 93777 ||| | ||||||| |||||| || || ||| || ||| | || || || |||| | Sbjct 381258 TACAACTACTTTGGCTTCAAGACGCTCGAGCGCTCCTACTTGCTTCGCATCGACGGCAAG 381199 Query 93778 GTTTCCGAGCGACCGCACCAGCTGCTGATGCGCGTCGCCATCGGGATTCACGGCCACGAC 93837 || |||| || ||||| || |||| |||||||||||| |||| || ||||| |||||| Sbjct 381198 GTCGCCGAACGCCCGCAACACATGCTCATGCGCGTCGCCGTCGGCATCCACGGTCACGAC 381139 Query 93838 ATGCCGAATGTTTTGCGGGCTTTCAGAGACATGCGGGACAAGAGGTA---TACCATGGCC 93894 || | || |||| | | | || |||| || | | || |||| ||| Sbjct 381138 ATCGAGCGCGTCTTGCAGTCGTACAACCTCATGTCCGA---GCGCTACTTTACCCACGCC 381082 Query 93895 ACCCCGACCCTGTTCAACGCGGGGACCCCGGTGCCACAGATGTCTTCGTGTTTCCTGATG 93954 | ||||| || |||||||| || || || || ||| | || |||||||||||| | Sbjct 381081 TCGCCGACGCTCTTCAACGCCGGAACGCCTCACCCGCAGCTTTCGTCGTGTTTCCTGGTC 381022 Query 93955 ACGAACAAGGCCGACTCCATCTCCGGAATTTTCGACAGCCTCAAGGACTGTGCGACCATC 94014 || | |||| |||||| ||| || || | ||||| |||||| || ||| |||| Sbjct 381021 ACCATGAAGGACGACTCGATCGAAGGCATCTACGACACGCTCAAGACGTGCGCGCTCATC 380962 Query 94015 TCAAAATACGCGGGGGGAATCGGGATCAGTGTCCACGACGTACGTGCCAGGGGTTCCTAC 94074 || || ||| || || ||||| | || ||||| || | || || | || || ||| Sbjct 380961 TCCAAGACCGCCGGTGGTATCGGTTTGAGCATCCACAACATCCGCGCGACCGGCTCTTAC 380902 Query 94075 ATCCGCGGTACCAATGGCACCTCCAACGGCCTCGTCCCTATGCTCCGGGTCTTCAACAAC 94134 ||| ||| || || ||| ||| |||||| ||||||| |||||||| |||| ||||||| Sbjct 380901 ATCGCCGGCACGAACGGCTACTCGAACGGCATCGTCCCCATGCTCCGTGTCTACAACAAC 380842 Query 94135 GCGGCGCGCTACGTGGACCAGGGTGGTGGGAGGAGGAAGGGTTCTTTCGCGGTCTATCTC 94194 | ||||||||||| ||||| ||||| | | | || | |||||| |||| ||| Sbjct 380841 ACCGCGCGCTACGTCGACCAAGGTGGCAACAAGCGTCCCGGAGCCTTCGCGATCTACCTC 380782 Query 94195 GAGCCCTGGCACGCGGACGTGCAGGCTTTCATCGACCTGCGAAAGAACCACGGCAACGAT 94254 ||||| |||||||| ||||| | ||| | ||||| || |||||||||||||| || Sbjct 380781 GAGCCATGGCACGCTGACGTCTTCGAGTTCCTGGACCTTCGCAAGAACCACGGCAAGGAG 380722 Query 94255 CTGGAGAGGGCCAGAGACCTCTTCTACGCTCTCTGGGTGCCAGACCTTTTTATGAAACGC 94314 || | || | || ||||||| || |||||| | || || || |||||| | || Sbjct 380721 GAGGTCCGCGCTCGTGATCTCTTCTTTGCGCTCTGGATTCCCGATCTGTTTATGGAGCGT 380662 Query 94315 GTCGAGAAAAACTCCGCCTGGAGTCTTTTTTGTCCCAATGAATGTCCCGGACTGTCCGAC 94374 |||||| | || ||| || || || ||| |||| ||||| || ||| Sbjct 380661 GTCGAGGCCGCCAGCGAGTGGCCCCTCTTCTGCCCCGCTGAAGCCCCCGGCCTCCACGAA 380602 Query 94375 GTTTGTGG-ATCGCGTTTTGAAGACTTGTATGCTCGTTACGAATCGCAGGGCAAGGCCAG 94433 || | ||| | ||| | | ||||| | |||||| | ||||| |||| Sbjct 380601 GTCTATGGCGAAGAGTTCCG-CGCCTTGTTCGAGAAATACGAAAAGGAGGGCCGCGCCAA 380543 Query 94434 GAAGGTTATGGATGCTAGGAAGCTGTGGGATCAGATCGTGGACGTACAGGTGGAGACGGG 94493 |||| || || ||||| ||| | ||| | || | ||||| || || || Sbjct 380542 GAAGACGATCCCCGCGCAAAAGCTTTGGTACGCGATTCTTGAAGCCCAGGTCGAAACCGG 380483 Query 94494 TACGCCCTACATCTTGTTCAAGGACTCTGTCAACGCCAAGTCCAACCAGCAGCACCTCGG 94553 | || | ||| | | ||||||| | | ||| || || ||||| || |||| || Sbjct 380482 CAACCCGTTCATGCTCTACAAGGACGCCGCAAACAAAAAATCGAACCAAAAGAACCTTGG 380423 Query 94554 GGTGATCAAGAGCTCGAATCTGTGCACCGAGATTGTCGAGTATACTTCTCCGGACGAGAT 94613 ||||||| ||||| ||||||||||||| ||||||| | | || || ||| Sbjct 380422 CACGATCAAGTCGTCGAACTTGTGCACCGAGATCATCGAGTACTCGGCGCCCGATGAGTG 380363 Query 94614 TGCTGTGTGTAACCTGGGCTCCATCAACCTGTCCACTTTCGTGCGAGATGCCTAC-ACGT 94672 || || || ||| ||| ||| ||| || | | ||| | | ||| || ||| Sbjct 380362 CGCCGTCTGCAACTTGGCCTCGATCGCGTTGCCGAGCTTCAT-CAAGA-----ACGGCGT 380309 Query 94673 CTACTGCTTCGTTCG-ATCTGGAGGAGCTTGTGAACTTCGCGGGAAGGATGGTCTTGAAC 94731 ||| ||| | | | || | ||| | || || ||| | | || ||| Sbjct 380308 GTACGACTT--TAAGAAGTTGCACGAGGTCGTCAAGGTCG---------TCGCTTTCAAC 380260 Query 94732 CTGAACAGGGTAATCGACAAGAACTTCTACCCCGTCCCGGAGGCGGAGAACTCAAACCTG 94791 ||||| | | |||||| |||| ||| |||||| |||||| ||||||| ||| | Sbjct 380259 TTGAACCGCATCATCGACGTCAACTACTATCCCGTCATCGAGGCGCAGAACTCCAACTTC 380200 Query 94792 AAGCATCGGCCCATCGGCATCGGCGTCCAGGGTTTCGCGGACGCG 94836 || || |||||||||||||| || || ||| |||| |||||| Sbjct 380199 CGCCACCGCCCCATCGGCATCGGAGTGCAAGGTCTCGCCGACGCG 380155 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 494722204369560