Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Microbotryum_20saponariae_20[genbank_20GCA_5F900015975.1_202016-12-
23] 161 sequences; 29,508,937 total letters
Query= NC_011616.1
Length=148634
Score E
Sequences producing significant alignments: (Bits) Value
seq80 134 1e-26
seq114 96.9 3e-15
>seq80
Length=1167844
Score = 134 bits (148), Expect = 1e-26
Identities = 166/227 (73%), Gaps = 0/227 (0%)
Strand=Plus/Minus
Query 126887 CCACCGCGTAATCGCAACACCAAATGTATCGTAGACTCTTTTTGAATATTGTAATCGCCC 126946
||||| || | |||| |||||| || | ||| ||||| || ||||| |||||||| |
Sbjct 789613 CCACCACGGAGACGCAGCACCAAGTGGAGCGTCGACTCCTTCTGAATGTTGTAATCCGCG 789554
Query 126947 ATCGTGCGAGAATCGTCTAGCTGTTTTCCAGCGTAGATCAATCGCTGCTGATCGGGAGGT 127006
| |||||| ||| || ||||| || || ||| |||||||||||||||| || || ||
Sbjct 789553 AGCGTGCGGCCATCCTCGAGCTGCTTGCCCGCGAAGATCAATCGCTGCTGGTCTGGGGGA 789494
Query 127007 ATGCCCTCCTTGTCCGTGATTTTCTGCTTGAGTTGTTCGACGGTGTCCGTACTCTCGACT 127066
||||| |||||||| || || ||||| | |||| ||||||| ||||||
Sbjct 789493 ATGCCTTCCTTGTCTTGAATCTTGGTCTTGACATTGTCGATCGTGTCCGAGGACTCGACC 789434
Query 127067 TCGACGGTCACCGTTTTGCCGGTCAGAGTTTTTACAAAAATCTGCAT 127113
|||| ||| | ||| ||||| || || || || || || || |||||
Sbjct 789433 TCGAGGGTGATCGTCTTGCCCGTAAGCGTCTTGACGAAGATTTGCAT 789387
Score = 107 bits (118), Expect = 2e-18
Identities = 160/227 (70%), Gaps = 0/227 (0%)
Strand=Plus/Minus
Query 126887 CCACCGCGTAATCGCAACACCAAATGTATCGTAGACTCTTTTTGAATATTGTAATCGCCC 126946
|||||||| | || | |||||| || | ||| ||||| || ||||| |||||||| |
Sbjct 789157 CCACCGCGGAGACGGAGCACCAAGTGGAGCGTCGACTCCTTCTGAATGTTGTAATCCGCG 789098
Query 126947 ATCGTGCGAGAATCGTCTAGCTGTTTTCCAGCGTAGATCAATCGCTGCTGATCGGGAGGT 127006
| |||||| ||| || ||||| || || || |||| | || || || || || ||
Sbjct 789097 AGCGTGCGGCCATCCTCGAGCTGCTTGCCCGCAAAGATGAGACGTTGTTGGTCTGGGGGA 789038
Query 127007 ATGCCCTCCTTGTCCGTGATTTTCTGCTTGAGTTGTTCGACGGTGTCCGTACTCTCGACT 127066
|| ||||||||||| ||| || ||||| | || | ||||||| ||||||
Sbjct 789037 ATACCCTCCTTGTCTTGGATCTTGGTCTTGACATTGTCAATCGTGTCCGAGGACTCGACC 788978
Query 127067 TCGACGGTCACCGTTTTGCCGGTCAGAGTTTTTACAAAAATCTGCAT 127113
|||| ||| | || |||||||||| || || || || || |||||
Sbjct 788977 TCGAGGGTGATGGTCTTGCCGGTCAAGGTCTTGACGAAGATTTGCAT 788931
Score = 104 bits (114), Expect = 2e-17
Identities = 159/227 (70%), Gaps = 0/227 (0%)
Strand=Plus/Minus
Query 126887 CCACCGCGTAATCGCAACACCAAATGTATCGTAGACTCTTTTTGAATATTGTAATCGCCC 126946
||||| || | || | |||||| || | ||| ||||| || ||||| |||||||| |
Sbjct 789385 CCACCACGGAGACGGAGCACCAAGTGGAGCGTCGACTCCTTCTGAATGTTGTAATCCGCG 789326
Query 126947 ATCGTGCGAGAATCGTCTAGCTGTTTTCCAGCGTAGATCAATCGCTGCTGATCGGGAGGT 127006
| |||||| ||| || ||||| || || || |||| | || || || || || ||
Sbjct 789325 AGCGTGCGGCCATCCTCGAGCTGCTTGCCCGCAAAGATGAGACGTTGTTGGTCTGGGGGA 789266
Query 127007 ATGCCCTCCTTGTCCGTGATTTTCTGCTTGAGTTGTTCGACGGTGTCCGTACTCTCGACT 127066
|| ||||||||||| ||| || ||||| | || | ||||||| ||||||
Sbjct 789265 ATACCCTCCTTGTCTTGGATCTTGGTCTTGACATTGTCAATCGTGTCCGAGGACTCGACC 789206
Query 127067 TCGACGGTCACCGTTTTGCCGGTCAGAGTTTTTACAAAAATCTGCAT 127113
|||| ||| | ||| ||||| || || || || || || || |||||
Sbjct 789205 TCGAGGGTGATCGTCTTGCCCGTAAGCGTCTTGACGAAGATTTGCAT 789159
Score = 102 bits (112), Expect = 8e-17
Identities = 166/235 (71%), Gaps = 3/235 (1%)
Strand=Plus/Minus
Query 126880 TACTGCTCCACCGCGTAATCGCAACACCAAATGTATCGTAGACTCTTTTTGAATATTGTA 126939
||||| ||| || || | || | |||||| || | ||| ||||| || || || |||||
Sbjct 547237 TACTG-TCCGCCTCGGAGACGGAGCACCAAGTGCAGCGTCGACTCCTTCTGGATGTTGTA 547179
Query 126940 ATCGCCCATCGTGCGAGAATCGTCTAGCTGTTTTCCAGCGTAGATCAATCGCTGCTGATC 126999
||| | | ||| || ||| || ||||| || || ||| |||| | || || || ||
Sbjct 547178 GTCGGCGAGCGTACGGCCATCCTCGAGCTGCTTGCCCGCGAAGATGAGACGTTGTTGGTC 547119
Query 127000 GGGAGGTATGCCCTCCTTGTCCGTGATTTTCTGCTTGA-GTTGTTCGACGGTGTCCGTAC 127058
|| || ||||||||||||||| || || ||||| |||| |||| |||||||
Sbjct 547118 TGGGGGAATGCCCTCCTTGTCCTGAATCTTGGCCTTGACGTTG-TCGATCGTGTCCGAGG 547060
Query 127059 TCTCGACTTCGACGGTCACCGTTTTGCCGGTCAGAGTTTTTACAAAAATCTGCAT 127113
||| || |||| || | ||| ||||| |||| || || || || || |||||
Sbjct 547059 ACTCAACCTCGAGCGTGATCGTCTTGCCTGTCAAGGTCTTGACGAAGATTTGCAT 547005
Score = 98.7 bits (108), Expect = 9e-16
Identities = 160/228 (70%), Gaps = 2/228 (1%)
Strand=Plus/Minus
Query 126887 CCACCGCGTAATCGCAACACCAAATGTATCGTAGACTCTTTTTGAATATTGTAATCGCCC 126946
||||| || | || | |||||| || | ||| ||||| || || || ||||||||| |
Sbjct 547003 CCACCTCGGAGGCGGAGCACCAAGTGCAGCGTCGACTCCTTCTGGATGTTGTAATCGGCG 546944
Query 126947 ATCGTGCGAGAATCGTCTAGCTGTTTTCCAGCGTAGATCAATCGCTGCTGATCGGGAGGT 127006
| ||| || ||| || ||||| || || ||| |||| | || || || || || ||
Sbjct 546943 AGCGTACGGCCATCCTCGAGCTGCTTGCCCGCGAAGATGAGACGTTGTTGGTCTGGGGGA 546884
Query 127007 ATGCCCTCCTTGTCCGTGATTTTCTGCTTGA-GTTGTTCGACGGTGTCCGTACTCTCGAC 127065
||||||||||| ||| || || ||| | |||| |||| ||||||| ||| ||
Sbjct 546883 ATGCCCTCCTTATCCTGAATCTTAGCCTTTACGTTG-TCGATCGTGTCCGAGGACTCAAC 546825
Query 127066 TTCGACGGTCACCGTTTTGCCGGTCAGAGTTTTTACAAAAATCTGCAT 127113
|| | || | ||| |||||||| | || || ||||| || |||||
Sbjct 546824 CTCAAGCGTGATCGTCTTGCCGGTTAAGGTCTTGACAAAGATTTGCAT 546777
>seq114
Length=2116821
Score = 96.9 bits (106), Expect = 3e-15
Identities = 102/132 (77%), Gaps = 2/132 (2%)
Strand=Plus/Minus
Query 47439 TACATCGAATTTGTCGCCGACCGCCTGCTCGTTCAGCTAAAGTATCCC-AAGATTTACCA 47497
|||||||| || ||||||||||| || | || | || | | ||| ||| | | |
Sbjct 1948211 TACATCGAGTTCGTCGCCGACCGATTGTTGGT-CGCCTTGGGCAACCCCAAGGTCTGGAA 1948153
Query 47498 CACCGAGAATCCATTCGAGTTTATGAACAACATTTCGCTCGAGGGCAAGACCAACTTTTT 47557
||||||||| || ||||| || ||||||| || ||||||||||||||||| ||||| ||
Sbjct 1948152 CACCGAGAACCCCTTCGACTTCATGAACATGATCTCGCTCGAGGGCAAGACAAACTTCTT 1948093
Query 47558 CGAGAAGCGCGT 47569
||||||||| ||
Sbjct 1948092 CGAGAAGCGTGT 1948081
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 475499843054640
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |