Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Microbotryum_20saponariae_20[genbank_20GCA_5F900015975.1_202016-12-
23] 161 sequences; 29,508,937 total letters
Query= NC_014766.1
Length=194022
Score E
Sequences producing significant alignments: (Bits) Value
seq69 154 2e-32
seq85 143 3e-29
seq99 116 5e-21
seq88 116 5e-21
>seq69
Length=186160
Score = 154 bits (170), Expect = 2e-32
Identities = 272/394 (69%), Gaps = 2/394 (1%)
Strand=Plus/Plus
Query 13592 CCGCATCTATCAAGCCTCTTCATCAGAGATGTTTGGTAAGGTTAAGGAGTCACCACAAAA 13651
|||| | || |||||||| | || ||| ||| || ||||| || | || |||
Sbjct 82218 CCGCTTTTACCAAGCCTCGACCTCCGAGTTGTACGGCAAGGTCGTCGAAACCCCTCAATC 82277
Query 13652 CGAGGAGACACCCTTCTACCCACGCTCGGTCTACGGAGTCTCAAAGGTTGCGGCACATTG 13711
|||| ||||||||||||||| || ||| ||||||||| | ||| | || ||
Sbjct 82278 CGAGACGACACCCTTCTACCCTCGTTCGCCTTACGGAGTCGCCAAGTTGTACGCCTTCTG 82337
Query 13712 GCTCGTAAAGAATTACCGCGAGTCTTACGGACTGTTTGCATGCTCCGGAATCCTCTTCAA 13771
| |||| ||||| ||||||||||| |||| ||| || ||| ||| ||| | |||||
Sbjct 82338 GATCGTCAAGAACTACCGCGAGTCGTACGACATGTACGCCTGCAACGGCATCTTGTTCAA 82397
Query 13772 CCATGAATCACCGAGACGAGGT-GCAGACTTTGTGACCATGAAGATTACCGAGGGTATCA 13830
||| || || ||| | || ||| ||| |||||| || | ||||||| || | | ||
Sbjct 82398 CCACGAGTCCCCGCGTCGTGGTCGCA-CCTTTGTCACGAGGAAGATTTCCCGAGCTGTCG 82456
Query 13831 AACAAATCATGAAGGGTGAAAAGGAGTTCATTGAATTGGGTAACATAAACGCGGAGAGAG 13890
| ||| | ||| || |||| | | || | | || ||||| | || || | |
Sbjct 82457 CCGAGATCTCGCTCGGTCAACAGGACTGCCTTTACCTCGGCAACATGGAGGCCAAGCGTG 82516
Query 13891 ATTGGGGTCACGCGAAGGACTATGTTGAAGCTATGTGGCTCATGCTTCAACAAGAGGAAG 13950
||||||| |||||| ||||| || || | ||||||| | ||||| || |||||
Sbjct 82517 ATTGGGGACACGCGCGCGACTACGTCGAGGGTATGTGGATGATGCTGCAGCAAGACACCC 82576
Query 13951 CCGACGAATATGTAGTAGCAACGGGTGAGACCCA 13984
||||||| | ||| | || ||||||||||||||
Sbjct 82577 CCGACGACTTTGTCCTCGCGACGGGTGAGACCCA 82610
>seq85
Length=404085
Score = 143 bits (158), Expect = 3e-29
Identities = 520/806 (65%), Gaps = 17/806 (2%)
Strand=Plus/Minus
Query 111611 CCCACAGTACATGTTCATGCGGGTCGCGATCGGTATCCATGGGGAAGATATTGATTCTGT 111670
||| || ||||| ||||||| ||||| |||| ||||| || | || || || ||
Sbjct 381187 CCCGCAACACATGCTCATGCGCGTCGCCGTCGGCATCCACGGTCACGACATCGAGCGCGT 381128
Query 111671 TTTGGAGACATACGACAAGATGTCCC-GTGGTATGTTCATCCACGCAACACCAACCCTCT 111729
||| || | ||| || |||||| | | || || | |||||| | || || ||||
Sbjct 381127 CTTGCAGTCGTACAACCTCATGTCCGAGCGCTACTTT-ACCCACGCCTCGCCGACGCTCT 381069
Query 111730 TCAACGCTGGTACACCAAGACCCCAAATGTCCAGTTGTTTCCTTATTGCAAACAAGGAGG 111789
||||||| || || || || || | || |||||||| | | | ||||| |
Sbjct 381068 TCAACGCCGGAACGCCTCACCCGCAGCTTTCGTCGTGTTTCCTGGTCACCATGAAGGACG 381009
Query 111790 ATTCAATCAATGGCATTTACGGCACTCTCACTGAATGTGCCCAAATCTCAAAGTGGGCTG 111849
| || ||| | ||||| |||| ||| |||| || || | ||||| ||| || |
Sbjct 381008 ACTCGATCGAAGGCATCTACGACACGCTCAAGACGTGCGCGCTCATCTCCAAGACCGCCG 380949
Query 111850 GTGGTATCGGGATGCACATCCATGATGTCAGAGCCAACAAGTCTCGTATTAGAGGTACAA 111909
|||||||||| || |||||| | || | || | | ||| || || || |
Sbjct 380948 GTGGTATCGGTTTGAGCATCCACAACATCCGCGCGACCGGCTCTTACATCGCCGGCACGA 380889
Query 111910 ATGGTCAATCAGATGGTATTATTCCAATGCTTCGCGTATTTAACGCCACAGCGCGCTATG 111969
| || | || | || || | || ||||| || || | ||| ||| |||||||| |
Sbjct 380888 ACGGCTACTCGAACGGCATCGTCCCCATGCTCCGTGTCTACAACAACACCGCGCGCTACG 380829
Query 111970 TAAACCAAGCTGG------GCGTCGCAAGGGATCTATCGCAGTCTATCTTGAGCCATGGC 112023
| |||||| ||| ||||| | ||| | |||| |||| || ||||||||||
Sbjct 380828 TCGACCAAGGTGGCAACAAGCGTCCC---GGAGCCTTCGCGATCTACCTCGAGCCATGGC 380772
Query 112024 ACGCGGATATCATGGAGTTCCTTGAGTTGCGTCTCAACCAAGGTGATGAGGAGG--CGCG 112081
|||| || || | |||||||| || | || ||||| || | ||||||| ||||
Sbjct 380771 ACGCTGACGTCTTCGAGTTCCTGGACCTTCGCAAGAACCACGGCAAGGAGGAGGTCCGCG 380712
Query 112082 GTGCCGCGATCTCTTCTCCGCTCTCTGGATTCCAGATCTCTTCATGAAGAGAGTTGAGGA 112141
| || |||||||||| || ||||||||||| ||||| || ||| || | || ||||
Sbjct 380711 CT--CGTGATCTCTTCTTTGCGCTCTGGATTCCCGATCTGTTTATGGAGCGTGTCGAGGC 380654
Query 112142 GAGTGGCAATTGGTCTCTCTTTTGTCCAGACAAGGCACCCGGTCTCTCCGATGCCGTGGG 112201
|| | ||| | ||||| || || | | || ||||| ||| ||| | | ||
Sbjct 380653 CGCCAGCGAGTGGCCCCTCTTCTGCCCCGCTGAAGCCCCCGGCCTCCACGAAGTCTATGG 380594
Query 112202 TGAGGAGTTTGAAGCCCTCTACACAAAGTACGAGGAAGAAAGTCGGGCGACTGCGACGGT 112261
|| ||||| ||| | | | || ||||| | || | || || | |||| |
Sbjct 380593 CGAAGAGTTCCGCGCCTTGTTCGAGAAATACGAAAAGGAGGGCCGCGCCAAGAAGACGAT 380534
Query 112262 GCCAGCTGCCGATG-TGTGGAAAGCTATTCTCAAGTCTCAAACCGAGACTGGTACACCAT 112320
|| || || | | | ||| | || ||||| | | || ||| || || | || |
Sbjct 380533 CCCCGC-GCAAAAGCTTTGGTACGCGATTCTTGAAGCCCAGGTCGAAACCGGCAACCCGT 380475
Query 112321 ATATGCTTTACAAAGACGCCTGTAACCAAAAGAGTAATCAAAAGAATTTGGGTGTGATCA 112380
||||| ||||| |||||| ||| |||| || |||||||| | || |||||
Sbjct 380474 TCATGCTCTACAAGGACGCCGCAAACAAAAAATCGAACCAAAAGAACCTTGGCACGATCA 380415
Query 112381 AGAGTTCCAACCTCTGTACAGAAATC 112406
|| || ||| | || || || |||
Sbjct 380414 AGTCGTCGAACTTGTGCACCGAGATC 380389
>seq99
Length=1308205
Score = 116 bits (128), Expect = 5e-21
Identities = 233/338 (69%), Gaps = 12/338 (4%)
Strand=Plus/Minus
Query 176723 TTGAGAATGAGACCCTTGATGTGGGAACCGTCGTTATCGGCATCCGTCATGATCATGAGA 176782
|||| || |||||||||||||| || || |||| ||| ||| | ||||||||||||
Sbjct 698601 TTGATGATCAGACCCTTGATGTGCGATCCATCGTGATCCTGATCGGCCATGATCATGAGC 698542
Query 176783 CGACCATACCGAAGCTCGGAAACATCTTGATAGTCCTTACCCTGTTGAAGACCCAAGATC 176842
|| || || ||| | || || ||| | || ||||| || | |||||||||
Sbjct 698541 TTGCCGTAACGGAGCGAGTCGACGTCGGTGTAGACTTTGCCCTGCTGCAAGCCCAAGATC 698482
Query 176843 TTCTTGAGATCG-TTGAACTCTTGGTTTGATGT--GAGCTGTGTGACAGAGGCATCACGA 176899
| ||||| ||| ||||| ||| | | || ||| | || | | || |||||
Sbjct 698481 TGCTTGA--TCGCTTGAA-TCTCGACATTATCGAGGAGGGCTTTGCCCGCCGCTTCACGC 698425
Query 176900 ACATTCTTACACTTCCCACGAAGAGGGAAGACACCGTAGTGATCGCGACCAACCACAGAG 176959
|| || |||| || || | |||||||||||| |||| || ||||| || || |
Sbjct 698424 ACGTTGAGCAACTTTCCTCGCAAAGGGAAGACACCATAGTTGTCTCGACCGACGACGGCC 698365
Query 176960 AGACCCGCAACCGCGAGCGTTTTCGCAGAATCACCCTCTGTCACGATGAGTGTACACTTG 177019
||||||| || ||||||| || || ||||| || || |||| |||||| || ||||||
Sbjct 698364 AGACCCGACACGGCGAGCGCCTTGGCGGAATCTCCTTCGGTCAAGATGAGCGTGCACTTG 698305
Query 177020 CCAGAT-TGTGC--CGTACCCGCCTTGTTCGCATCATC 177054
||| || | ||| || || ||||| ||||| ||
Sbjct 698304 ---GATCCGTTCCTCGTTCCAGCGTTGTTTGCATCCTC 698270
Score = 82.4 bits (90), Expect = 9e-11
Identities = 77/98 (79%), Gaps = 0/98 (0%)
Strand=Plus/Minus
Query 102222 TCTGGTTCCTTCTGCGCTATTTATTGGCTCAAGAAGCGAGGTCTCATGCCAGGTCTCTGC 102281
|| || |||||| | | || | ||||||||| || ||||| |||||||| || |||||
Sbjct 424776 TCAGGCTCCTTCGCCTCCATCTTTTGGCTCAAAAAACGAGGCCTCATGCCCGGCCTCTGT 424717
Query 102282 TTCTCCAACGAGCTTATCTCTCGTGACGAGGGACTCCA 102319
|||||||||||||| || || || ||||| || || ||
Sbjct 424716 TTCTCCAACGAGCTCATATCCCGCGACGAAGGTCTTCA 424679
>seq88
Length=463073
Score = 116 bits (128), Expect = 5e-21
Identities = 163/226 (72%), Gaps = 2/226 (1%)
Strand=Plus/Minus
Query 13592 CCGCATCTATCAAGCCTCTTCATCAGAGATGTTTGGTAAGGTTAAGGAGTCACCACAAAA 13651
|||| |||| |||||||| | || ||| ||| || ||||| ||| | || ||
Sbjct 326097 CCGCTTCTACCAAGCCTCGACCTCGGAGTTGTACGGCAAGGTCGTCGAGACCCCTCAGTC 326038
Query 13652 CGAGGAGACACCCTTCTACCCACGCTCGGTCTACGGAGTCTCAAAGGTTGCGGCACATTG 13711
|||| ||| ||||||||||| |||||| |||||||||| | ||| | || ||
Sbjct 326037 CGAGACGACCCCCTTCTACCCTCGCTCGCCCTACGGAGTCGCCAAGCTGTACGCCTTCTG 325978
Query 13712 GCTCGTAAAGAATTACCGCGAGTCTTACGGACTGTTTGCATGCTCCGGAATCCTCTTCAA 13771
| |||| ||||| ||||||||||| ||||| ||| || ||| ||| |||||||||||
Sbjct 325977 GATCGTCAAGAACTACCGCGAGTCGTACGGCATGTACGCGTGCAACGGTATCCTCTTCAA 325918
Query 13772 CCATGAATCACCGAGACGAGG-TGCAGACTTTGTGACCATGAAGAT 13816
||| || || || | || || ||| |||||| |||| |||||
Sbjct 325917 CCACGAGTCCCCCCGCCGTGGCCGCA-CCTTTGTCACCAGAAAGAT 325873
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 620741150755920
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |