Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Microbotryum_20saponariae_20[genbank_20GCA_5F900015975.1_202016-12-
23] 161 sequences; 29,508,937 total letters
Query= NC_015398.1
Length=101487
Score E
Sequences producing significant alignments: (Bits) Value
seq80 95.1 8e-15
seq105 91.5 1e-13
seq56 89.7 3e-13
>seq80
Length=1167844
Score = 95.1 bits (104), Expect = 8e-15
Identities = 147/210 (70%), Gaps = 0/210 (0%)
Strand=Plus/Minus
Query 34773 ACCAAGTGAATTGTGCTTTCTTTCTGAATGTTATAGTCCGAAAGGCTTCGTTCATCATCC 34832
|||||||| | || || ||||||||||| || |||| || | || |||| ||
Sbjct 789367 ACCAAGTGGAGCGTCGACTCCTTCTGAATGTTGTAATCCGCGAGCGTGCGGCCATCCTCG 789308
Query 34833 AGCTGTTTTCCGGCAAATATTAGTCGTTGCTGGTCTTGCGGCACCCCCTCCTTGTCGCTA 34892
||||| || || ||||| || || ||||| |||||| | || | |||||||||||
Sbjct 789307 AGCTGCTTGCCCGCAAAGATGAGACGTTGTTGGTCTGGGGGAATACCCTCCTTGTCTTGG 789248
Query 34893 ATCTTCTGTTTGACGGATGCTATCGATTCACCGGCCTCAACATCGACGGTTATGGTTTTT 34952
||||| ||||| | |||| || || ||| || |||| ||| || || ||
Sbjct 789247 ATCTTGGTCTTGACATTGTCAATCGTGTCCGAGGACTCGACCTCGAGGGTGATCGTCTTG 789188
Query 34953 CCCGTGAGAGTCTTCACAAAGATCTGCATA 34982
||||| || ||||| || ||||| ||||||
Sbjct 789187 CCCGTAAGCGTCTTGACGAAGATTTGCATA 789158
Score = 91.5 bits (100), Expect = 1e-13
Identities = 146/210 (70%), Gaps = 0/210 (0%)
Strand=Plus/Minus
Query 34773 ACCAAGTGAATTGTGCTTTCTTTCTGAATGTTATAGTCCGAAAGGCTTCGTTCATCATCC 34832
|||||||| | || || ||||||||||| || |||| || | || |||| ||
Sbjct 789595 ACCAAGTGGAGCGTCGACTCCTTCTGAATGTTGTAATCCGCGAGCGTGCGGCCATCCTCG 789536
Query 34833 AGCTGTTTTCCGGCAAATATTAGTCGTTGCTGGTCTTGCGGCACCCCCTCCTTGTCGCTA 34892
||||| || || || || || | ||| ||||||||| | || | || |||||||| |
Sbjct 789535 AGCTGCTTGCCCGCGAAGATCAATCGCTGCTGGTCTGGGGGAATGCCTTCCTTGTCTTGA 789476
Query 34893 ATCTTCTGTTTGACGGATGCTATCGATTCACCGGCCTCAACATCGACGGTTATGGTTTTT 34952
||||| ||||| | |||| || || ||| || |||| ||| || || ||
Sbjct 789475 ATCTTGGTCTTGACATTGTCGATCGTGTCCGAGGACTCGACCTCGAGGGTGATCGTCTTG 789416
Query 34953 CCCGTGAGAGTCTTCACAAAGATCTGCATA 34982
||||| || ||||| || ||||| ||||||
Sbjct 789415 CCCGTAAGCGTCTTGACGAAGATTTGCATA 789386
Score = 89.7 bits (98), Expect = 3e-13
Identities = 145/209 (69%), Gaps = 0/209 (0%)
Strand=Plus/Minus
Query 34773 ACCAAGTGAATTGTGCTTTCTTTCTGAATGTTATAGTCCGAAAGGCTTCGTTCATCATCC 34832
|||||||| | || || ||||||||||| || |||| || | || |||| ||
Sbjct 789139 ACCAAGTGGAGCGTCGACTCCTTCTGAATGTTGTAATCCGCGAGCGTGCGGCCATCCTCG 789080
Query 34833 AGCTGTTTTCCGGCAAATATTAGTCGTTGCTGGTCTTGCGGCACCCCCTCCTTGTCGCTA 34892
||||| || || ||||| || || ||||| |||||| | || | |||||||||||
Sbjct 789079 AGCTGCTTGCCCGCAAAGATGAGACGTTGTTGGTCTGGGGGAATACCCTCCTTGTCTTGG 789020
Query 34893 ATCTTCTGTTTGACGGATGCTATCGATTCACCGGCCTCAACATCGACGGTTATGGTTTTT 34952
||||| ||||| | |||| || || ||| || |||| ||| ||||| ||
Sbjct 789019 ATCTTGGTCTTGACATTGTCAATCGTGTCCGAGGACTCGACCTCGAGGGTGATGGTCTTG 788960
Query 34953 CCCGTGAGAGTCTTCACAAAGATCTGCAT 34981
|| || | ||||| || ||||| |||||
Sbjct 788959 CCGGTCAAGGTCTTGACGAAGATTTGCAT 788931
Score = 86.0 bits (94), Expect = 4e-12
Identities = 145/210 (69%), Gaps = 0/210 (0%)
Strand=Plus/Minus
Query 34773 ACCAAGTGAATTGTGCTTTCTTTCTGAATGTTATAGTCCGAAAGGCTTCGTTCATCATCC 34832
|||||||| | || || ||||| ||||| ||||| | || | || |||| ||
Sbjct 547213 ACCAAGTGCAGCGTCGACTCCTTCTGGATGTTGTAGTCGGCGAGCGTACGGCCATCCTCG 547154
Query 34833 AGCTGTTTTCCGGCAAATATTAGTCGTTGCTGGTCTTGCGGCACCCCCTCCTTGTCGCTA 34892
||||| || || || || || || ||||| |||||| | || | ||||||||||| |
Sbjct 547153 AGCTGCTTGCCCGCGAAGATGAGACGTTGTTGGTCTGGGGGAATGCCCTCCTTGTCCTGA 547094
Query 34893 ATCTTCTGTTTGACGGATGCTATCGATTCACCGGCCTCAACATCGACGGTTATGGTTTTT 34952
||||| |||||| | |||| || || |||||| |||| || || || ||
Sbjct 547093 ATCTTGGCCTTGACGTTGTCGATCGTGTCCGAGGACTCAACCTCGAGCGTGATCGTCTTG 547034
Query 34953 CCCGTGAGAGTCTTCACAAAGATCTGCATA 34982
|| || | ||||| || ||||| ||||||
Sbjct 547033 CCTGTCAAGGTCTTGACGAAGATTTGCATA 547004
>seq105
Length=561522
Score = 91.5 bits (100), Expect = 1e-13
Identities = 145/208 (70%), Gaps = 0/208 (0%)
Strand=Plus/Plus
Query 34773 ACCAAGTGAATTGTGCTTTCTTTCTGAATGTTATAGTCCGAAAGGCTTCGTTCATCATCC 34832
|||||||| | || || || || ||||| || |||| || | || |||| ||
Sbjct 279995 ACCAAGTGGAGCGTCGACTCCTTTTGGATGTTGTAATCCGCGAGCGTGCGGCCATCCTCG 280054
Query 34833 AGCTGTTTTCCGGCAAATATTAGTCGTTGCTGGTCTTGCGGCACCCCCTCCTTGTCGCTA 34892
||||| || |||||||| || || ||||||||||| | || | || ||||||||
Sbjct 280055 AGCTGCTTGCCGGCAAAGATGAGACGTTGCTGGTCGGGGGGGATGCCTTCCTTGTCCTGG 280114
Query 34893 ATCTTCTGTTTGACGGATGCTATCGATTCACCGGCCTCAACATCGACGGTTATGGTTTTT 34952
||||| |||||| | |||| || | ||| || |||| ||| ||||| ||
Sbjct 280115 ATCTTGGTCTTGACGTTGTCGATCGTGTCGGACGACTCGACCTCGAGGGTGATGGTCTTG 280174
Query 34953 CCCGTGAGAGTCTTCACAAAGATCTGCA 34980
|||||||| ||||| || ||||| ||||
Sbjct 280175 CCCGTGAGGGTCTTGACGAAGATTTGCA 280202
>seq56
Length=195491
Score = 89.7 bits (98), Expect = 3e-13
Identities = 152/219 (69%), Gaps = 1/219 (0%)
Strand=Plus/Minus
Query 34773 ACCAAGTGAATTGTGCTTTCTTTCTGAATGTTATAGTCCGAAAGGCTTCGTTCATCATCC 34832
|||||||| | || || || || ||||| ||||| | | | | || |||| ||
Sbjct 107510 ACCAAGTGGAGGGTCGACTCCTTTTGGATGTTGTAGTCGGCCAAGGTGCGGCCATCCTCG 107451
Query 34833 AGCTGTTTTCCGGCAAATATTAGTCGTTGCTGGTCTTGCGGCACCCCCTCCTTGTCGCTA 34892
||||| || ||||| || || || |||||||||||| | || | || ||||||||
Sbjct 107450 AGCTGCTTGCCGGCGAAGATGAGACGTTGCTGGTCTGGGGGGATGCCTTCCTTGTCTTGG 107391
Query 34893 ATCTTCTGTTTGACGGATGCTATCGATTCACCGGCCTCAACATCGACGGTTATGGTTTTT 34952
||||| |||||| | |||| || | ||| || |||| ||| || || ||
Sbjct 107390 ATCTTGGTCTTGACGTTGTCGATCGTGTCGGACGACTCGACCTCGAGGGTGATCGTCTTG 107331
Query 34953 CCCGTGAGAGTCTTCACAAAGATCTGCAT-ATTCGTAGA 34990
||||| |||||||| || ||||| ||| | ||||| |||
Sbjct 107330 CCCGTAAGAGTCTTGACGAAGATTTGCCTGATTCGCAGA 107292
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 324632963008008
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |