Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Microbotryum_20saponariae_20[genbank_20GCA_5F900015975.1_202016-12- 23] 161 sequences; 29,508,937 total letters Query= NC_017940.1 Length=127732 Score E Sequences producing significant alignments: (Bits) Value seq88 156 3e-33 >seq88 Length=463073 Score = 156 bits (172), Expect = 3e-33 Identities = 241/340 (71%), Gaps = 3/340 (1%) Strand=Plus/Plus Query 30045 GGGGTTCCAGGCGCACACGATGATGCGCCTGTCTTCTGGGTTGTTCCTGATGAGGTCCAC 30104 ||||||||| || | || |||||| | ||| || ||||| | | |||| | || Sbjct 278014 GGGGTTCCAAGCACTCAAGATGATCCTCCTATCGGTGGGGTTTTCCTTGATACTCTTGAC 278073 Query 30105 GGCGTTTTGCAGCTGATCCACCCCCATCCCCGAGTAGTCTGCCCTCAT-GTCCGTGTACT 30163 || | || |||||| ||||| ||| || || || || | |||| | |||| Sbjct 278074 AGCCTGCATCAACTGATCGACCCCTCCCCCTGA-TAATCATCCTTGGCCGTCC-TATACT 278131 Query 30164 CTGCTCCGAAATGCCTCCACTGGAACCCGTACACCGGTCCCAGGTCTCCCTCTTCCCTGT 30223 |||| ||||| ||||||||||||||||| || |||||||||| || ||||||||||| | Sbjct 278132 CTGCGCCGAAGTGCCTCCACTGGAACCCATAAACCGGTCCCAAATCCCCCTCTTCCCTAT 278191 Query 30224 GCTCGAAGCCCCTCTTGTCCAAAAAGTCTCTGGAACCGTTGGCGTCCCAGATCTTTACCC 30283 || | || || |||||||| ||| ||||| || || || | ||||| ||||| |||| Sbjct 278192 GCCCCAACCCAACCTTGTCCAGAAATTCTCTCGATCCATTCCCATCCCAAATCTTGACCC 278251 Query 30284 CCTTCTCGGAGAGCTCTTTGGAGTTTGTGGACCCTCTGACGAACCACAGCAGCTCCTCCA 30343 |||| ||||| | ||| || | || || |||| |||||||| || || ||||| | Sbjct 278252 CCTTGTCGGACAATAATTTCGAATCGGTCGATCCTCGAACGAACCAAAGGAGTTCCTCGA 278311 Query 30344 CGACGGCCTTCCAAAAGACCCTCTTGGTCGTGAGGAGGGG 30383 || | | ||||||| ||||||| || | ||||| Sbjct 278312 TGATACCTCGCGTAAAGACCTTCTTGGTGGTCAAAAGGGG 278351 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 408616798215653