Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Microbotryum_20saponariae_20[genbank_20GCA_5F900015975.1_202016-12- 23] 161 sequences; 29,508,937 total letters Query= NC_019495.1 Length=290304 Score E Sequences producing significant alignments: (Bits) Value seq85 242 7e-59 seq99 96.9 6e-15 seq114 95.1 2e-14 >seq85 Length=404085 Score = 242 bits (268), Expect = 7e-59 Identities = 791/1216 (65%), Gaps = 41/1216 (3%) Strand=Plus/Plus Query 221423 GCAGCGTGGTAGATGGTCTCAAAGATCATCTTGTTGAGTCTCTTG---GCCTCGGGAGAA 221479 || ||||||||||||||||| |||||| ||||||||| |||| |||||||| ||| Sbjct 380072 GCGGCGTGGTAGATGGTCTCGAAGATCTGCTTGTTGAG---CTTGCGCGCCTCGGGTGAA 380128 Query 221480 GTGAAGGGCATACGCAGCATC-TGAAAGACGTCGGCCAGTCCCTGTACTCCGATACCGAT 221538 ||| ||||| || | | |||| | ||||||| || || || |||||||| ||||| Sbjct 380129 TCGAACGGCATCGCCAACGCCATGAACG-CGTCGGCGAGACCTTGCACTCCGATGCCGAT 380187 Query 221539 GGGCCTGTGTCTCCTGTTGGAAGCGGCCGCTTCTGGCACGGGATAAAAGTTGACGTCGAT 221598 ||| | ||| | |||||| ||| || |||||||| ||||||||||||| Sbjct 380188 GGGGCGGTGGCGGAAGTTGGAGTTCTGCGCCTCGATGACGGGATAGTAGTTGACGTCGAT 380247 Query 221599 CAGATTGTTGAGGTTCAGAGTGATGACTTTAACCACCTCGGTCAGCTTCTGGTGATTGAA 221658 | ||| | ||| | || || ||| || || |||||| || |||| || || Sbjct 380248 GATGCGGTTCAAGTTGAAAGCGACGACCTTGACGACCTCGTGCAACTTC------TTAAA 380301 Query 221659 CACCAACTCGCCGCCGTCGTGGAGGGGTTCCACAAAAGCGTTTAGGGCAACGCTGGCCAG 221718 | || ||||| || || | | || | || ||| | || ||||| Sbjct 380302 GTCGTACACGCCG--TTCTTGATGAAGCTCGGC-AACGCG--------ATCG-AGGCCAA 380349 Query 221719 GTTACACACGGCCACCTCGTCCTTGTTGGTATACTGTATGATCTCTGTACAGAGGTTGCT 221778 ||| || ||||| ||| || | |||| |||||||| || || | ||| Sbjct 380350 GTTGCAGACGGCGCACTCATCGGGCGCCGAGTACTCGATGATCTCGGTGCACAAGTTCGA 380409 Query 221779 GCACTTGATGGTCCCCAGGTGATTGTGATTAGACTTGCGATTGGCAGCGTCCTTGTAGAG 221838 ||||||| || || |||| || || || || || || || |||||||||||||| Sbjct 380410 CGACTTGATCGTGCCAAGGTTCTTTTGGTTCGATTTTTTGTTTGCGGCGTCCTTGTAGAG 380469 Query 221839 CATAAAGGGACCGCCAGTCTCCAGCTGAGCCACCAGAATCTTGTCCCAGAGTTCTCTGGC 221898 ||| || || ||| || || | ||| || | |||||| || ||| || | | || Sbjct 380470 CATGAACGGGTTGCCGGTTTCGACCTGGGCTTCAAGAATCGCGTACCAAAGCTTTTGCGC 380529 Query 221899 GCTCACCGTCCTCTTGACTGCACCCTCGGTCTTTTCATACCCGGTATAGAGCATGTC--- 221955 | | |||| ||||| | ||||| |||||| || | | || || | | Sbjct 380530 GGGGATCGTCTTCTTGGCGCGGCCCTC---CTTTTCGTA---TTTCTCGAACAAGGCGCG 380583 Query 221956 AAACTTTTCACCGTACGCCTCGTCCAGGCCTGGACACCTGGCGGGACACATCAGACTCCA 222015 |||| ||| || || | |||| ||||| || ||||| || | || ||| Sbjct 380584 GAACTCTTCGCCATAGACTTCGTGGAGGCCGGGGGCTTCAGCGGGGCAGAAGAGGGGCCA 380643 Query 222016 GTGCTTGTTGTCTTTGACCCTCTGCATGAAGAGGTCCGGGATCCACAGCGCCTGAAAGAG 222075 | || | | | ||| | || ||| || || || || ||||| ||||| ||||| Sbjct 380644 CTCGCTGGCGGCCTCGACACGCTCCATAAACAGATCGGGAATCCAGAGCGCAAAGAAGAG 380703 Query 222076 ATCTCTGGTCCGCTGCTCCTCCACGCCGTTGTTTTTCCTCAGATCCAAAAACTCAAAAAT 222135 ||| | | || ||||||| ||||| ||| || | || |||| ||||| || | Sbjct 380704 ATCACGAGCGCGGACCTCCTCCTTGCCGTGGTTCTTGCGAAGGTCCAGGAACTCGAAGAC 380763 Query 222136 GTCAGCGTGCCACGGCTCCAGATAGACGGCCAGAGCGCCGGGTCGCTTGTTGCCACCCTG 222195 |||||||||||| ||||| || |||| || | || ||||| |||||||||||||| || Sbjct 380764 GTCAGCGTGCCATGGCTCGAGGTAGATCGCGAAGGCTCCGGGACGCTTGTTGCCACCTTG 380823 Query 222196 ATCCACCATCCTCTCCAGAGCGTTGAAGATGCGAAGGGTCGGTACCAGTCCGTTGGATCG 222255 || || | | | |||| ||| || || | || || | ||||| || Sbjct 380824 GTCGACGTAGCGCGCGGTGTTGTTGTAGACACGGAGCATGGGGACGATGCCGTTCGAGTA 380883 Query 222256 ACCGTTGGTGCCCTTAATGTACGCACCGCCGGCCCTCAGGTTACTGGCAG-ACATGCCGA 222314 ||||| ||||| ||||| | ||| || | | ||| ||| | || |||| Sbjct 380884 GCCGTTCGTGCCGGCGATGTAAGAGCCGGTCGCGCGGATGTT-GTGGATGCTCAAACCGA 380942 Query 222315 TACCACCGGCGTGTTTCGAGATCATGGCGCAGCTCTTGAGAGTGTCCATGATGCCCTCCA 222374 ||||||||||| || ||||| | ||||| ||||||| ||||| |||||| || | Sbjct 380943 TACCACCGGCGGTCTTGGAGATGAGCGCGCACGTCTTGAGCGTGTCGTAGATGCCTTCGA 381002 Query 222375 TAGAGTCCTCCTTGACGTTCAGCAGAAAACAAGACGACATCTGAGATTTGGTGGAACAGG 222434 | ||||| ||||| | | | | ||| ||||| ||||| | ||| | | | | | || Sbjct 381003 TCGAGTCGTCCTTCATGGTGACCAGGAAACACGACGAAAGCTGCGGGTGAGGCGTTCCGG 381062 Query 222435 CGTTAAACAGCGTGGGACTGGCGTGTGTAAAGTAGCCCCTAGACATCAGATCGTACGTCT 222494 |||| || ||||| || |||||| |||||||||| | ||||| || | ||||| || Sbjct 381063 CGTTGAAGAGCGTCGGCGAGGCGTGGGTAAAGTAGCGCTCGGACATGAGGTTGTACGACT 381122 Query 222495 CTACGACTCTGGCGATGTTGTCCCCGTGAATCTGCATGGCGCATCTCATGTACATGTACT 222554 | ||| | |||||| || ||||| || | |||| | |||| ||||| | Sbjct 381123 GCAAGACGCGCTCGATGTCGTGACCGTGGATGCCGACGGCGACGCGCATGAGCATGTGTT 381182 Query 222555 GGGGCCTCTCCACAGGACCCT--TGGAGCTGGAGAGCAGGTACGATTTTTCCAGAGTCTT 222612 | || | || | |||| | | | || |||| ||| || || || ||||| Sbjct 381183 GCGGGCGTTCGGC--GACCTTGCCGTCGATGCGAAGCAAGTAGGAGCGCTCGAGCGTCTT 381240 Query 222613 GAACCCAAAGTAGTTG 222628 ||| |||||||||||| Sbjct 381241 GAAGCCAAAGTAGTTG 381256 >seq99 Length=1308205 Score = 96.9 bits (106), Expect = 6e-15 Identities = 163/235 (69%), Gaps = 7/235 (3%) Strand=Plus/Minus Query 25477 ATATGGGAGATGTACAAGAAGGCTCAAAACTCAAACTGGACCGCCGAAGAGATTGATCTG 25536 || |||| |||||||| | || ||| || ||| ||||||||||||| ||||| Sbjct 425461 ATCTGGGCCATGTACAAACAAGCCCAAGCGTCCTTTTGGTCCGCCGAAGAGATCGATCTC 425402 Query 25537 GCCAAGGACATGGACGGCTGGTAC-----GCTCTATCCAAAGACGAGCAGCATTTTCTCA 25591 | ||| ||| | ||| |||| || |||| | ||| ||||| | | ||| || Sbjct 425401 GGCAACGACCTCCACGACTGGCACCACAAGCTCAA--CAACGACGAACGCTACTTTATCG 425344 Query 25592 AGTACGTGTTGGCATTCTTTGCAGCCTCTGATGGTATAGTGAACGAGAATCTGTGCGAGA 25651 ||||| | || ||||| || || || ||||| | ||||| |||||| || ||||| Sbjct 425343 CCCACGTGCTCGCCTTCTTCGCCGCTTCGGATGGGGTCGTGAATGAGAATTTGGTCGAGA 425284 Query 25652 GATTCACCAGGGAAGTGCAGTACGTGGAGGCCAAGTGTTTCTACGGTTTCCAGAT 25706 | ||| | || || ||||||| || ||||| | ||| || || || || ||||| Sbjct 425283 GGTTCTCGAGCGAGGTGCAGTTCGCCGAGGCGAGGTGCTTTTATGGGTTTCAGAT 425229 >seq114 Length=2116821 Score = 95.1 bits (104), Expect = 2e-14 Identities = 141/199 (71%), Gaps = 7/199 (4%) Strand=Plus/Minus Query 25513 TGGACCGCCGAAGAGATTGATCTGGCCAAGGACATGGACGGCTGGTAC-----GCTCTAT 25567 ||||||||||||||||| || || ||||||||||| ||| |||| || |||| | Sbjct 1949235 TGGACCGCCGAAGAGATGGACTTGTCCAAGGACATGCACGACTGGGACAACAAGCTCAAG 1949176 Query 25568 CCAAAGACGAGCAGCATTTTCTCAAGTACGTGTTGGCATTCTTTGCAGCCTCTGATGGTA 25627 || ||||||| | || || | |||| | || || || || ||||| || || | Sbjct 1949175 CCC--GACGAGCGCTACTTCATCTCGCACGTCCTCGCCTTTTTCGCCGCCTCCGACGGCA 1949118 Query 25628 TAGTGAACGAGAATCTGTGCGAGAGATTCACCAGGGAAGTGCAGTACGTGGAGGCCAAGT 25687 | || |||||||| || |||| ||||| | | || || |||| || ||||| | Sbjct 1949117 TTGTCAACGAGAACTTGGTCGAGCGATTCTCTGGTGAGGTCCAGTCCGCCGAGGCTCGAT 1949058 Query 25688 GTTTCTACGGTTTCCAGAT 25706 | |||||||||||||| || Sbjct 1949057 GCTTCTACGGTTTCCAAAT 1949039 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 928842930699840