Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Microbotryum_20saponariae_20[genbank_20GCA_5F900015975.1_202016-12-
23] 161 sequences; 29,508,937 total letters
Query= NC_019495.1
Length=290304
Score E
Sequences producing significant alignments: (Bits) Value
seq85 242 7e-59
seq99 96.9 6e-15
seq114 95.1 2e-14
>seq85
Length=404085
Score = 242 bits (268), Expect = 7e-59
Identities = 791/1216 (65%), Gaps = 41/1216 (3%)
Strand=Plus/Plus
Query 221423 GCAGCGTGGTAGATGGTCTCAAAGATCATCTTGTTGAGTCTCTTG---GCCTCGGGAGAA 221479
|| ||||||||||||||||| |||||| ||||||||| |||| |||||||| |||
Sbjct 380072 GCGGCGTGGTAGATGGTCTCGAAGATCTGCTTGTTGAG---CTTGCGCGCCTCGGGTGAA 380128
Query 221480 GTGAAGGGCATACGCAGCATC-TGAAAGACGTCGGCCAGTCCCTGTACTCCGATACCGAT 221538
||| ||||| || | | |||| | ||||||| || || || |||||||| |||||
Sbjct 380129 TCGAACGGCATCGCCAACGCCATGAACG-CGTCGGCGAGACCTTGCACTCCGATGCCGAT 380187
Query 221539 GGGCCTGTGTCTCCTGTTGGAAGCGGCCGCTTCTGGCACGGGATAAAAGTTGACGTCGAT 221598
||| | ||| | |||||| ||| || |||||||| |||||||||||||
Sbjct 380188 GGGGCGGTGGCGGAAGTTGGAGTTCTGCGCCTCGATGACGGGATAGTAGTTGACGTCGAT 380247
Query 221599 CAGATTGTTGAGGTTCAGAGTGATGACTTTAACCACCTCGGTCAGCTTCTGGTGATTGAA 221658
| ||| | ||| | || || ||| || || |||||| || |||| || ||
Sbjct 380248 GATGCGGTTCAAGTTGAAAGCGACGACCTTGACGACCTCGTGCAACTTC------TTAAA 380301
Query 221659 CACCAACTCGCCGCCGTCGTGGAGGGGTTCCACAAAAGCGTTTAGGGCAACGCTGGCCAG 221718
| || ||||| || || | | || | || ||| | || |||||
Sbjct 380302 GTCGTACACGCCG--TTCTTGATGAAGCTCGGC-AACGCG--------ATCG-AGGCCAA 380349
Query 221719 GTTACACACGGCCACCTCGTCCTTGTTGGTATACTGTATGATCTCTGTACAGAGGTTGCT 221778
||| || ||||| ||| || | |||| |||||||| || || | |||
Sbjct 380350 GTTGCAGACGGCGCACTCATCGGGCGCCGAGTACTCGATGATCTCGGTGCACAAGTTCGA 380409
Query 221779 GCACTTGATGGTCCCCAGGTGATTGTGATTAGACTTGCGATTGGCAGCGTCCTTGTAGAG 221838
||||||| || || |||| || || || || || || || ||||||||||||||
Sbjct 380410 CGACTTGATCGTGCCAAGGTTCTTTTGGTTCGATTTTTTGTTTGCGGCGTCCTTGTAGAG 380469
Query 221839 CATAAAGGGACCGCCAGTCTCCAGCTGAGCCACCAGAATCTTGTCCCAGAGTTCTCTGGC 221898
||| || || ||| || || | ||| || | |||||| || ||| || | | ||
Sbjct 380470 CATGAACGGGTTGCCGGTTTCGACCTGGGCTTCAAGAATCGCGTACCAAAGCTTTTGCGC 380529
Query 221899 GCTCACCGTCCTCTTGACTGCACCCTCGGTCTTTTCATACCCGGTATAGAGCATGTC--- 221955
| | |||| ||||| | ||||| |||||| || | | || || | |
Sbjct 380530 GGGGATCGTCTTCTTGGCGCGGCCCTC---CTTTTCGTA---TTTCTCGAACAAGGCGCG 380583
Query 221956 AAACTTTTCACCGTACGCCTCGTCCAGGCCTGGACACCTGGCGGGACACATCAGACTCCA 222015
|||| ||| || || | |||| ||||| || ||||| || | || |||
Sbjct 380584 GAACTCTTCGCCATAGACTTCGTGGAGGCCGGGGGCTTCAGCGGGGCAGAAGAGGGGCCA 380643
Query 222016 GTGCTTGTTGTCTTTGACCCTCTGCATGAAGAGGTCCGGGATCCACAGCGCCTGAAAGAG 222075
| || | | | ||| | || ||| || || || || ||||| ||||| |||||
Sbjct 380644 CTCGCTGGCGGCCTCGACACGCTCCATAAACAGATCGGGAATCCAGAGCGCAAAGAAGAG 380703
Query 222076 ATCTCTGGTCCGCTGCTCCTCCACGCCGTTGTTTTTCCTCAGATCCAAAAACTCAAAAAT 222135
||| | | || ||||||| ||||| ||| || | || |||| ||||| || |
Sbjct 380704 ATCACGAGCGCGGACCTCCTCCTTGCCGTGGTTCTTGCGAAGGTCCAGGAACTCGAAGAC 380763
Query 222136 GTCAGCGTGCCACGGCTCCAGATAGACGGCCAGAGCGCCGGGTCGCTTGTTGCCACCCTG 222195
|||||||||||| ||||| || |||| || | || ||||| |||||||||||||| ||
Sbjct 380764 GTCAGCGTGCCATGGCTCGAGGTAGATCGCGAAGGCTCCGGGACGCTTGTTGCCACCTTG 380823
Query 222196 ATCCACCATCCTCTCCAGAGCGTTGAAGATGCGAAGGGTCGGTACCAGTCCGTTGGATCG 222255
|| || | | | |||| ||| || || | || || | ||||| ||
Sbjct 380824 GTCGACGTAGCGCGCGGTGTTGTTGTAGACACGGAGCATGGGGACGATGCCGTTCGAGTA 380883
Query 222256 ACCGTTGGTGCCCTTAATGTACGCACCGCCGGCCCTCAGGTTACTGGCAG-ACATGCCGA 222314
||||| ||||| ||||| | ||| || | | ||| ||| | || ||||
Sbjct 380884 GCCGTTCGTGCCGGCGATGTAAGAGCCGGTCGCGCGGATGTT-GTGGATGCTCAAACCGA 380942
Query 222315 TACCACCGGCGTGTTTCGAGATCATGGCGCAGCTCTTGAGAGTGTCCATGATGCCCTCCA 222374
||||||||||| || ||||| | ||||| ||||||| ||||| |||||| || |
Sbjct 380943 TACCACCGGCGGTCTTGGAGATGAGCGCGCACGTCTTGAGCGTGTCGTAGATGCCTTCGA 381002
Query 222375 TAGAGTCCTCCTTGACGTTCAGCAGAAAACAAGACGACATCTGAGATTTGGTGGAACAGG 222434
| ||||| ||||| | | | | ||| ||||| ||||| | ||| | | | | | ||
Sbjct 381003 TCGAGTCGTCCTTCATGGTGACCAGGAAACACGACGAAAGCTGCGGGTGAGGCGTTCCGG 381062
Query 222435 CGTTAAACAGCGTGGGACTGGCGTGTGTAAAGTAGCCCCTAGACATCAGATCGTACGTCT 222494
|||| || ||||| || |||||| |||||||||| | ||||| || | ||||| ||
Sbjct 381063 CGTTGAAGAGCGTCGGCGAGGCGTGGGTAAAGTAGCGCTCGGACATGAGGTTGTACGACT 381122
Query 222495 CTACGACTCTGGCGATGTTGTCCCCGTGAATCTGCATGGCGCATCTCATGTACATGTACT 222554
| ||| | |||||| || ||||| || | |||| | |||| ||||| |
Sbjct 381123 GCAAGACGCGCTCGATGTCGTGACCGTGGATGCCGACGGCGACGCGCATGAGCATGTGTT 381182
Query 222555 GGGGCCTCTCCACAGGACCCT--TGGAGCTGGAGAGCAGGTACGATTTTTCCAGAGTCTT 222612
| || | || | |||| | | | || |||| ||| || || || |||||
Sbjct 381183 GCGGGCGTTCGGC--GACCTTGCCGTCGATGCGAAGCAAGTAGGAGCGCTCGAGCGTCTT 381240
Query 222613 GAACCCAAAGTAGTTG 222628
||| ||||||||||||
Sbjct 381241 GAAGCCAAAGTAGTTG 381256
>seq99
Length=1308205
Score = 96.9 bits (106), Expect = 6e-15
Identities = 163/235 (69%), Gaps = 7/235 (3%)
Strand=Plus/Minus
Query 25477 ATATGGGAGATGTACAAGAAGGCTCAAAACTCAAACTGGACCGCCGAAGAGATTGATCTG 25536
|| |||| |||||||| | || ||| || ||| ||||||||||||| |||||
Sbjct 425461 ATCTGGGCCATGTACAAACAAGCCCAAGCGTCCTTTTGGTCCGCCGAAGAGATCGATCTC 425402
Query 25537 GCCAAGGACATGGACGGCTGGTAC-----GCTCTATCCAAAGACGAGCAGCATTTTCTCA 25591
| ||| ||| | ||| |||| || |||| | ||| ||||| | | ||| ||
Sbjct 425401 GGCAACGACCTCCACGACTGGCACCACAAGCTCAA--CAACGACGAACGCTACTTTATCG 425344
Query 25592 AGTACGTGTTGGCATTCTTTGCAGCCTCTGATGGTATAGTGAACGAGAATCTGTGCGAGA 25651
||||| | || ||||| || || || ||||| | ||||| |||||| || |||||
Sbjct 425343 CCCACGTGCTCGCCTTCTTCGCCGCTTCGGATGGGGTCGTGAATGAGAATTTGGTCGAGA 425284
Query 25652 GATTCACCAGGGAAGTGCAGTACGTGGAGGCCAAGTGTTTCTACGGTTTCCAGAT 25706
| ||| | || || ||||||| || ||||| | ||| || || || || |||||
Sbjct 425283 GGTTCTCGAGCGAGGTGCAGTTCGCCGAGGCGAGGTGCTTTTATGGGTTTCAGAT 425229
>seq114
Length=2116821
Score = 95.1 bits (104), Expect = 2e-14
Identities = 141/199 (71%), Gaps = 7/199 (4%)
Strand=Plus/Minus
Query 25513 TGGACCGCCGAAGAGATTGATCTGGCCAAGGACATGGACGGCTGGTAC-----GCTCTAT 25567
||||||||||||||||| || || ||||||||||| ||| |||| || |||| |
Sbjct 1949235 TGGACCGCCGAAGAGATGGACTTGTCCAAGGACATGCACGACTGGGACAACAAGCTCAAG 1949176
Query 25568 CCAAAGACGAGCAGCATTTTCTCAAGTACGTGTTGGCATTCTTTGCAGCCTCTGATGGTA 25627
|| ||||||| | || || | |||| | || || || || ||||| || || |
Sbjct 1949175 CCC--GACGAGCGCTACTTCATCTCGCACGTCCTCGCCTTTTTCGCCGCCTCCGACGGCA 1949118
Query 25628 TAGTGAACGAGAATCTGTGCGAGAGATTCACCAGGGAAGTGCAGTACGTGGAGGCCAAGT 25687
| || |||||||| || |||| ||||| | | || || |||| || ||||| |
Sbjct 1949117 TTGTCAACGAGAACTTGGTCGAGCGATTCTCTGGTGAGGTCCAGTCCGCCGAGGCTCGAT 1949058
Query 25688 GTTTCTACGGTTTCCAGAT 25706
| |||||||||||||| ||
Sbjct 1949057 GCTTCTACGGTTTCCAAAT 1949039
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 928842930699840
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |