Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Microbotryum_20saponariae_20[genbank_20GCA_5F900015975.1_202016-12-
23] 161 sequences; 29,508,937 total letters
Query= NC_020852.1
Length=186468
Score E
Sequences producing significant alignments: (Bits) Value
seq85 152 6e-32
seq69 140 4e-28
seq88 118 1e-21
>seq85
Length=404085
Score = 152 bits (168), Expect = 6e-32
Identities = 549/856 (64%), Gaps = 11/856 (1%)
Strand=Plus/Minus
Query 75211 CCCACAGTACATGTTCATGCGGGTCGCAATCGGCATCCACGGGGAAGACATTGATTCTGT 75270
||| || ||||| ||||||| ||||| ||||||||||||| | ||||| || ||
Sbjct 381187 CCCGCAACACATGCTCATGCGCGTCGCCGTCGGCATCCACGGTCACGACATCGAGCGCGT 381128
Query 75271 CTTGGAGACATACGACAAGATGTCCCAAGGTATGTTCATTCACGCAACACCAACCCTCTT 75330
|||| || | ||| || |||||| | | || | ||||| | || || |||||
Sbjct 381127 CTTGCAGTCGTACAACCTCATGTCCGAGCGCTACTTTACCCACGCCTCGCCGACGCTCTT 381068
Query 75331 CAATGCTGGTACACCAAGACCGCAGATGTCCAGTTGCTTCCTTATCGCCAACAAGGAGGA 75390
||| || || || || |||||| | || || ||||| || ||| ||||| ||
Sbjct 381067 CAACGCCGGAACGCCTCACCCGCAGCTTTCGTCGTGTTTCCTGGTCACCATGAAGGACGA 381008
Query 75391 CTCAATCAACGGTATCTATGGAACTCTTACGGAGTGTGCGCAAATCTCAAAGTGGGCTGG 75450
||| ||| | || ||||| | || || | | ||| |||| ||||| ||| || ||
Sbjct 381007 CTCGATCGAAGGCATCTACGACACGCTCAAGACGTGCGCGCTCATCTCCAAGACCGCCGG 380948
Query 75451 GGGTATTGGGATGCACATCCATGATGTGAGAGCCAATAAATCTCGTATTCGGGGGACAAA 75510
||||| || || |||||| | | | || | ||| || || || ||
Sbjct 380947 TGGTATCGGTTTGAGCATCCACAACATCCGCGCGACCGGCTCTTACATCGCCGGCACGAA 380888
Query 75511 TGGTCAATCAGATGGTATTATTCCAATGCTTCGCGTATTTAACGCCACAGCGCGCTATGT 75570
|| | || | || || | || ||||| || || | ||| ||| |||||||| ||
Sbjct 380887 CGGCTACTCGAACGGCATCGTCCCCATGCTCCGTGTCTACAACAACACCGCGCGCTACGT 380828
Query 75571 AAATCAAGCGGG------GCGTCGCAAGGGGTCCATCGCGGTCTACTTGGAACCATGGCA 75624
| |||| || ||||| | || || ||||| ||||| | || ||||||||
Sbjct 380827 CGACCAAGGTGGCAACAAGCGTCCC---GGAGCCTTCGCGATCTACCTCGAGCCATGGCA 380771
Query 75625 TGCCGATATCATGGAGTTCCTTGAGTTACGACTCAACCAAGGTGACGAAGAGGCTCGGTG 75684
|| || || | |||||||| || | || ||||| || | || |||| ||
Sbjct 380770 CGCTGACGTCTTCGAGTTCCTGGACCTTCGCAAGAACCACGGCAAGGAGGAGGTCCGCGC 380711
Query 75685 TAGAGATCTCTTTTCATCCCTGTGGATTCCAGACCTTTTCATGAAGCGGGTTGAGGAGGG 75744
| | |||||||| | | || |||||||| || || || ||| |||| || |||| |
Sbjct 380710 TCGTGATCTCTTCTTTGCGCTCTGGATTCCCGATCTGTTTATGGAGCGTGTCGAGGCCGC 380651
Query 75745 TGGTCAATGGTCTCTTTTCTGTCCAGACAAGGCACCAGGTCTCTCCGACGCGGTGGGTGA 75804
| | ||| | || ||||| || | | || || || ||| ||| | || ||
Sbjct 380650 CAGCGAGTGGCCCCTCTTCTGCCCCGCTGAAGCCCCCGGCCTCCACGAAGTCTATGGCGA 380591
Query 75805 GGAGTTTGAAGCCCTCTACACAAAGTATGAAGAGGAGGGTAGAGCCAATGCGACTGTACC 75864
||||| ||| | | | || || ||| ||||||| | ||||| ||| | ||
Sbjct 380590 AGAGTTCCGCGCCTTGTTCGAGAAATACGAAAAGGAGGGCCGCGCCAAGAAGACGATCCC 380531
Query 75865 AGCCGCCGATG-TTTGGAAGGCTATTCTCAAATCACAGACGGAGACTGGAACACCATATA 75923
|| || | | ||||| | || ||||| || | ||| || || || | || | |
Sbjct 380530 CGC-GCAAAAGCTTTGGTACGCGATTCTTGAAGCCCAGGTCGAAACCGGCAACCCGTTCA 380472
Query 75924 TGCTTTACAAGGATGCTTGTAACAAGAAGAGTAACCAAAAGAATTTGGGAACAATCAAGA 75983
|||| |||||||| || ||||| || ||||||||||| | || || ||||||
Sbjct 380471 TGCTCTACAAGGACGCCGCAAACAAAAAATCGAACCAAAAGAACCTTGGCACGATCAAGT 380412
Query 75984 GCTCAAATCTTTGCACGGAAATTTTAGAGTACACAGATAAGGATGAGACGGCTGTTTGCA 76043
|| || | ||||| || || | |||||| | | |||||| || || ||||
Sbjct 380411 CGTCGAACTTGTGCACCGAGATCATCGAGTACTCGGCGCCCGATGAGTGCGCCGTCTGCA 380352
Query 76044 ATTTGGCATCAATCGC 76059
| ||||| || |||||
Sbjct 380351 ACTTGGCCTCGATCGC 380336
>seq69
Length=186160
Score = 140 bits (154), Expect = 4e-28
Identities = 275/407 (68%), Gaps = 0/407 (0%)
Strand=Plus/Minus
Query 177559 TCAACAAACTGCCTCACAGAGTGTGTCTCCCCCGTCGCGACAACATATTCATCAGCCTCT 177618
|| || |||| | | || | ||| ||||| |||||||||| ||| | || || |
Sbjct 82631 TCGACGAACTCCTTGACGGGGTGGGTCTCACCCGTCGCGAGGACAAAGTCGTCGGGGGTG 82572
Query 177619 TCTTGTTGAAGCATGAGCCACATGGCTTCAACATAGTCCTTGGCATGACCCCAGTCTCTG 177678
||||| || ||||| | |||||| | || || ||||| || || ||||| || |
Sbjct 82571 TCTTGCTGCAGCATCATCCACATACCCTCGACGTAGTCGCGCGCGTGTCCCCAATCACGC 82512
Query 177679 GCAGCGTTGAGGTTACCGAGTTCAAGGAACTCTCTCTCACCTTTCACAATTTGTTTGACG 177738
|| | | ||| ||||| | |||| | || | ||| | || | |||
Sbjct 82511 TTGGCCTCCATGTTGCCGAGGTAAAGGCAGTCCTGTTGACCGAGCGAGATCTCGGCGACA 82452
Query 177739 CCATCAGTAATCTTCTTTGTGACAAAGTCGGCACCTCGTCTCGGTGATTCGTGGTTGAAG 177798
| | ||||||| | ||||||||| | ||| || | ||| || |||||||||||
Sbjct 82451 GCTCGGGAAATCTTCCTCGTGACAAAGGTGCGACCACGACGCGGGGACTCGTGGTTGAAC 82392
Query 177799 AGGATTCCGGAGCAGGCATACATACCATAGGATTCTCGGTAATTTTTGACGAGCCAGTGA 177858
| ||| ||| |||||| ||||| | || || || ||||| || ||||||| ||||
Sbjct 82391 AAGATGCCGTTGCAGGCGTACATGTCGTACGACTCGCGGTAGTTCTTGACGATCCAGAAG 82332
Query 177859 GCGGCCAATTTGGAGACGCCATAGACGGATCGTGGGTAGAAGGGTGTCTCCTCAGTTTGT 177918
||| ||| |||| ||| || || || || ||||||||||||||| ||| | |||
Sbjct 82331 GCGTACAACTTGGCGACTCCGTAAGGCGAACGAGGGTAGAAGGGTGTCGTCTCGGATTGA 82272
Query 177919 GGAGTTTCTCGGACTTTACCAAACATCTCCGAAGTTGAGGCTTGGTA 177965
|| ||||| ||| || || ||| ||| || || |||||||||||
Sbjct 82271 GGGGTTTCGACGACCTTGCCGTACAACTCGGAGGTCGAGGCTTGGTA 82225
>seq88
Length=463073
Score = 118 bits (130), Expect = 1e-21
Identities = 157/218 (72%), Gaps = 0/218 (0%)
Strand=Plus/Plus
Query 177748 ATCTTCTTTGTGACAAAGTCGGCACCTCGTCTCGGTGATTCGTGGTTGAAGAGGATTCCG 177807
||||| | ||||||||| | || || | || || ||||||||||||||||| |||
Sbjct 325873 ATCTTTCTGGTGACAAAGGTGCGGCCACGGCGGGGGGACTCGTGGTTGAAGAGGATACCG 325932
Query 177808 GAGCAGGCATACATACCATAGGATTCTCGGTAATTTTTGACGAGCCAGTGAGCGGCCAAT 177867
||| || ||||| || || || || ||||| || ||||||| |||| ||| ||
Sbjct 325933 TTGCACGCGTACATGCCGTACGACTCGCGGTAGTTCTTGACGATCCAGAAGGCGTACAGC 325992
Query 177868 TTGGAGACGCCATAGACGGATCGTGGGTAGAAGGGTGTCTCCTCAGTTTGTGGAGTTTCT 177927
|||| ||| || ||| || || ||||||||||| ||| ||| | || || || ||
Sbjct 325993 TTGGCGACTCCGTAGGGCGAGCGAGGGTAGAAGGGGGTCGTCTCGGACTGAGGGGTCTCG 326052
Query 177928 CGGACTTTACCAAACATCTCCGAAGTTGAGGCTTGGTA 177965
||| || || ||| |||||| || |||||||||||
Sbjct 326053 ACGACCTTGCCGTACAACTCCGAGGTCGAGGCTTGGTA 326090
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 596568399403680
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |