Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Microbotryum_20saponariae_20[genbank_20GCA_5F900015975.1_202016-12-
23] 161 sequences; 29,508,937 total letters
Query= NC_021923.1
Length=140633
Score E
Sequences producing significant alignments: (Bits) Value
seq105 123 2e-23
seq80 118 1e-21
seq56 118 1e-21
>seq105
Length=561522
Score = 123 bits (136), Expect = 2e-23
Identities = 165/227 (73%), Gaps = 2/227 (1%)
Strand=Plus/Minus
Query 24705 TGCAGATCTTTATTAAAACGCTAACCGGTAAAACTATTACGCTCGAAGTAGAAGCCACCG 24764
|||| ||||| | || || || || || || || || || ||||| || || | |||
Sbjct 280202 TGCAAATCTTCGTCAAGACCCTCACGGGCAAGACCATCACCCTCGAGGTCGAGTCGTCCG 280143
Query 24765 ACACAGTAGA-AACGGTAAAACAAAAGATCCAAGACAAAGAAGGAATACCTCCCGATCAA 24823
|||| | || |||| || || || |||||| ||||| ||||| || || ||||| ||
Sbjct 280142 ACACGATCGACAACGTCAAGACCAA-GATCCAGGACAAGGAAGGCATCCCCCCCGACCAG 280084
Query 24824 CAACGTTTGATCTTTGCCGGGAAACAGCTGGAGGATTCGAGAAACATGTCAGATTATAAC 24883
|||||| | ||||||||||| || ||||| |||||| | | | | ||||| |||
Sbjct 280083 CAACGTCTCATCTTTGCCGGCAAGCAGCTCGAGGATGGCCGCACGCTCGCGGATTACAAC 280024
Query 24884 ATTCAAAAGGAATCGACACTACACTTGGTGTTGCGATTGCGCGGAGG 24930
|| |||||||| ||||| || ||||||||| | || |||| || ||
Sbjct 280023 ATCCAAAAGGAGTCGACGCTCCACTTGGTGCTCCGCCTGCGTGGTGG 279977
>seq80
Length=1167844
Score = 118 bits (130), Expect = 1e-21
Identities = 163/228 (71%), Gaps = 0/228 (0%)
Strand=Plus/Plus
Query 24703 GATGCAGATCTTTATTAAAACGCTAACCGGTAAAACTATTACGCTCGAAGTAGAAGCCAC 24762
|||||| ||||| | || || | ||||| || || || || ||||| || || || |
Sbjct 788930 GATGCAAATCTTCGTCAAGACCTTGACCGGCAAGACCATCACCCTCGAGGTCGAGTCCTC 788989
Query 24763 CGACACAGTAGAAACGGTAAAACAAAAGATCCAAGACAAAGAAGGAATACCTCCCGATCA 24822
||||| | || | || || |||||||||||||| || || || || || || ||
Sbjct 788990 GGACACGATTGACAATGTCAAGACCAAGATCCAAGACAAGGAGGGTATTCCCCCAGACCA 789049
Query 24823 ACAACGTTTGATCTTTGCCGGGAAACAGCTGGAGGATTCGAGAAACATGTCAGATTATAA 24882
||||||| | |||||||| || || ||||| |||||| | | | | ||||| ||
Sbjct 789050 ACAACGTCTCATCTTTGCGGGCAAGCAGCTCGAGGATGGCCGCACGCTCGCGGATTACAA 789109
Query 24883 CATTCAAAAGGAATCGACACTACACTTGGTGTTGCGATTGCGCGGAGG 24930
|||||| ||||| ||||| || ||||||||| | || | ||||| ||
Sbjct 789110 CATTCAGAAGGAGTCGACGCTCCACTTGGTGCTCCGTCTCCGCGGTGG 789157
Score = 118 bits (130), Expect = 1e-21
Identities = 152/210 (72%), Gaps = 0/210 (0%)
Strand=Plus/Plus
Query 24704 ATGCAGATCTTTATTAAAACGCTAACCGGTAAAACTATTACGCTCGAAGTAGAAGCCACC 24763
||||| ||||| | || ||||| || || || || || || ||||| || || || |
Sbjct 789159 ATGCAAATCTTCGTCAAGACGCTTACGGGCAAGACGATCACCCTCGAGGTCGAGTCCTCG 789218
Query 24764 GACACAGTAGAAACGGTAAAACAAAAGATCCAAGACAAAGAAGGAATACCTCCCGATCAA 24823
||||| | || | || || |||||||||||||| || || || || || || |||
Sbjct 789219 GACACGATTGACAATGTCAAGACCAAGATCCAAGACAAGGAGGGTATTCCCCCAGACCAA 789278
Query 24824 CAACGTTTGATCTTTGCCGGGAAACAGCTGGAGGATTCGAGAAACATGTCAGATTATAAC 24883
|||||| | |||||||| || || ||||| |||||| | | | | ||||| |||
Sbjct 789279 CAACGTCTCATCTTTGCGGGCAAGCAGCTCGAGGATGGCCGCACGCTCGCGGATTACAAC 789338
Query 24884 ATTCAAAAGGAATCGACACTACACTTGGTG 24913
||||| ||||| ||||| || |||||||||
Sbjct 789339 ATTCAGAAGGAGTCGACGCTCCACTTGGTG 789368
>seq56
Length=195491
Score = 118 bits (130), Expect = 1e-21
Identities = 153/209 (73%), Gaps = 2/209 (1%)
Strand=Plus/Plus
Query 24706 GCAGATCTTTATTAAAACGCTAACCGGTAAAACTATTACGCTCGAAGTAGAAGCCACCGA 24765
||| ||||| | || || || || || || || || || ||||| || || | ||||
Sbjct 107304 GCAAATCTTCGTCAAGACTCTTACGGGCAAGACGATCACCCTCGAGGTCGAGTCGTCCGA 107363
Query 24766 CACAGTAGA-AACGGTAAAACAAAAGATCCAAGACAAAGAAGGAATACCTCCCGATCAAC 24824
||| | || |||| || || || |||||||||||| ||||| || || || || || |
Sbjct 107364 CACGATCGACAACGTCAAGACCAA-GATCCAAGACAAGGAAGGCATCCCCCCAGACCAGC 107422
Query 24825 AACGTTTGATCTTTGCCGGGAAACAGCTGGAGGATTCGAGAAACATGTCAGATTATAACA 24884
||||| | ||||| ||||| || ||||| |||||| | | | || | || || ||||
Sbjct 107423 AACGTCTCATCTTCGCCGGCAAGCAGCTCGAGGATGGCCGCACCTTGGCCGACTACAACA 107482
Query 24885 TTCAAAAGGAATCGACACTACACTTGGTG 24913
| |||||||| ||||| || |||||||||
Sbjct 107483 TCCAAAAGGAGTCGACCCTCCACTTGGTG 107511
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 449896694581080
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |