Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Microbotryum_20saponariae_20[genbank_20GCA_5F900015975.1_202016-12-
23] 161 sequences; 29,508,937 total letters
Query= NC_021924.1
Length=129052
Score E
Sequences producing significant alignments: (Bits) Value
seq67 118 9e-22
seq80 98.7 8e-16
seq105 96.9 3e-15
>seq67
Length=942804
Score = 118 bits (130), Expect = 9e-22
Identities = 279/408 (68%), Gaps = 15/408 (4%)
Strand=Plus/Plus
Query 34204 GGCGGGTTTTTCAGTATGAAGGTGTTGAGCTTATGCGAGAAGTGTAG-CGT-GCCGTGAT 34261
|| ||||| || || |||||||| |||| || || | | | ||| | ||| |||| | |
Sbjct 886758 GGGGGGTTCTTAAGGATGAAGGTCGTGAGTTTGTG-GCGCA-TGTCGACGTTGCCGCGCT 886815
Query 34262 AACCGCATGCTTTGCAGCCCTGACAGATAATG--TTCTTTTTAGCGGACACGATGAGCTC 34319
|||||||| |||||| | || || ||| ||| | || | || |||||| ||
Sbjct 886816 TGCCGCATGCCTTGCAGTC---ACGGAGGATGAATTCGTCTTTGGTGAT--GATGAGGTC 886870
Query 34320 AGTCTCCGGGTTGTCACATTCCGGACACAACACAAACTTGCGGATGAAACCATCAAGCAG 34379
|| || ||||| | || || || | ||| |||||| |||||| | || ||||
Sbjct 886871 CGTTTCGGGGTTCTTGCACGACGCGCATAGCACGAACTTGTCGATGAAGACGTCGAGCAA 886930
Query 34380 GTCCTGTAACTTAACGGAGTCGTGGGAGCCGTTGACGATGAATCGTTCGTTTTTGTAATC 34439
||| | | | | ||||| | ||||||||||||| | |||||| | | | |
Sbjct 886931 GTCACGCAGACGATTCGTCTCGTGCGCGCCGTTGACGATGTAGCGTTCGGTCTCATCGTT 886990
Query 34440 GACCTGCGTTTGCGCGCCCAGCTCGCACCCGAAGTACTTTGTCGGGTAAATGGCCGGACG 34499
|| || || ||||| || |||||||| ||| |||| |||||||| | ||| ||
Sbjct 886991 GAAGGTCGCCTGGGCGCCGAGTTCGCACCCAAAGAACTTGGTCGGGTACGACGACGGGCG 887050
Query 34500 -TCCAAGCGCCTTGGCGATTTCGGGCATGTTGACGATGACAGTCTTGATGCCGTTGCCCT 34558
| |||| || |||| || | ||||||| | ||||||||||||||||||||
Sbjct 887051 ATTCAAG-GCTCGCGCGACATCAGCCATGTTGGGAAACACAGTCTTGATGCCGTTGCCGC 887109
Query 34559 TTCCTTCGACCTTGGCGCAGATGCG-CGGCATTTTGTAGCGGTAGAAC 34605
|| |||| ||||| ||| ||| ||||| |||||||||||||||
Sbjct 887110 GGCCCTCGATCTTGGTCAAGA-GCGAGGGCATCTTGTAGCGGTAGAAC 887156
>seq80
Length=1167844
Score = 98.7 bits (108), Expect = 8e-16
Identities = 158/227 (70%), Gaps = 0/227 (0%)
Strand=Plus/Plus
Query 110273 ATGCAAATATTTGTCAAAACTTTAACCGGCAAAACCATTACCGTCGAAACGGAGCCTGAC 110332
|||||||| |||||||| || ||||||||||| || || || | || ||| |
Sbjct 546777 ATGCAAATCTTTGTCAAGACCTTAACCGGCAAGACGATCACGCTTGAGGTTGAGTCCTCG 546836
Query 110333 GATACTGTCGGCCAGGTAAAACAGAAGATTGCCGACAAAGAAGGCGTGCCCGTGGATCAA 110392
|| || ||| | | ||||| |||||| || || || ||| | ||| || |||
Sbjct 546837 GACACGATCGACAACGTAAAGGCTAAGATTCAGGATAAGGAGGGCATTCCCCCAGACCAA 546896
Query 110393 CAAAGACTTATTTATGCGGGTAAACAGCTGGAGGATGCCAGAACAATGGCGGATTACAAC 110452
||| | || || | ||||| || ||||| ||||||| | | || | || |||||||||
Sbjct 546897 CAACGTCTCATCTTCGCGGGCAAGCAGCTCGAGGATGGCCGTACGCTCGCCGATTACAAC 546956
Query 110453 ATTCAAAAAGAATCTACGTTGCACATGGTGTTAAGACTGCGAGGGGG 110499
|| || || || || ||| ||||| ||||| | | || ||||| ||
Sbjct 546957 ATCCAGAAGGAGTCGACGCTGCACTTGGTGCTCCGCCTCCGAGGTGG 547003
Score = 95.1 bits (104), Expect = 1e-14
Identities = 147/210 (70%), Gaps = 0/210 (0%)
Strand=Plus/Plus
Query 110273 ATGCAAATATTTGTCAAAACTTTAACCGGCAAAACCATTACCGTCGAAACGGAGCCTGAC 110332
|||||||| || ||||| || || |||||||| ||||| ||| |||| ||| |
Sbjct 788931 ATGCAAATCTTCGTCAAGACCTTGACCGGCAAGACCATCACCCTCGAGGTCGAGTCCTCG 788990
Query 110333 GATACTGTCGGCCAGGTAAAACAGAAGATTGCCGACAAAGAAGGCGTGCCCGTGGATCAA 110392
|| || | | | | || || ||||| ||||| || || | ||| || |||
Sbjct 788991 GACACGATTGACAATGTCAAGACCAAGATCCAAGACAAGGAGGGTATTCCCCCAGACCAA 789050
Query 110393 CAAAGACTTATTTATGCGGGTAAACAGCTGGAGGATGCCAGAACAATGGCGGATTACAAC 110452
||| | || || | |||||| || ||||| ||||||| | | || | ||||||||||||
Sbjct 789051 CAACGTCTCATCTTTGCGGGCAAGCAGCTCGAGGATGGCCGCACGCTCGCGGATTACAAC 789110
Query 110453 ATTCAAAAAGAATCTACGTTGCACATGGTG 110482
||||| || || || ||| | ||| |||||
Sbjct 789111 ATTCAGAAGGAGTCGACGCTCCACTTGGTG 789140
Score = 86.0 bits (94), Expect = 5e-12
Identities = 145/210 (69%), Gaps = 0/210 (0%)
Strand=Plus/Plus
Query 110273 ATGCAAATATTTGTCAAAACTTTAACCGGCAAAACCATTACCGTCGAAACGGAGCCTGAC 110332
|||||||| || ||||| || | || ||||| || || ||| |||| ||| |
Sbjct 789387 ATGCAAATCTTCGTCAAGACGCTTACGGGCAAGACGATCACCCTCGAGGTCGAGTCCTCG 789446
Query 110333 GATACTGTCGGCCAGGTAAAACAGAAGATTGCCGACAAAGAAGGCGTGCCCGTGGATCAA 110392
|| || ||| | | || || |||||| ||||| |||||| | ||| || ||
Sbjct 789447 GACACGATCGACAATGTCAAGACCAAGATTCAAGACAAGGAAGGCATTCCCCCAGACCAG 789506
Query 110393 CAAAGACTTATTTATGCGGGTAAACAGCTGGAGGATGCCAGAACAATGGCGGATTACAAC 110452
|| || | || | ||||| || ||||| ||||||| | | || | ||||||||||||
Sbjct 789507 CAGCGATTGATCTTCGCGGGCAAGCAGCTCGAGGATGGCCGCACGCTCGCGGATTACAAC 789566
Query 110453 ATTCAAAAAGAATCTACGTTGCACATGGTG 110482
||||| || || || ||| | ||| |||||
Sbjct 789567 ATTCAGAAGGAGTCGACGCTCCACTTGGTG 789596
Score = 82.4 bits (90), Expect = 6e-11
Identities = 144/210 (69%), Gaps = 0/210 (0%)
Strand=Plus/Plus
Query 110273 ATGCAAATATTTGTCAAAACTTTAACCGGCAAAACCATTACCGTCGAAACGGAGCCTGAC 110332
|||||||| || ||||| || | || ||||| || || ||| |||| ||| |
Sbjct 789159 ATGCAAATCTTCGTCAAGACGCTTACGGGCAAGACGATCACCCTCGAGGTCGAGTCCTCG 789218
Query 110333 GATACTGTCGGCCAGGTAAAACAGAAGATTGCCGACAAAGAAGGCGTGCCCGTGGATCAA 110392
|| || | | | | || || ||||| ||||| || || | ||| || |||
Sbjct 789219 GACACGATTGACAATGTCAAGACCAAGATCCAAGACAAGGAGGGTATTCCCCCAGACCAA 789278
Query 110393 CAAAGACTTATTTATGCGGGTAAACAGCTGGAGGATGCCAGAACAATGGCGGATTACAAC 110452
||| | || || | |||||| || ||||| ||||||| | | || | ||||||||||||
Sbjct 789279 CAACGTCTCATCTTTGCGGGCAAGCAGCTCGAGGATGGCCGCACGCTCGCGGATTACAAC 789338
Query 110453 ATTCAAAAAGAATCTACGTTGCACATGGTG 110482
||||| || || || ||| | ||| |||||
Sbjct 789339 ATTCAGAAGGAGTCGACGCTCCACTTGGTG 789368
>seq105
Length=561522
Score = 96.9 bits (106), Expect = 3e-15
Identities = 157/226 (69%), Gaps = 0/226 (0%)
Strand=Plus/Minus
Query 110274 TGCAAATATTTGTCAAAACTTTAACCGGCAAAACCATTACCGTCGAAACGGAGCCTGACG 110333
||||||| || ||||| || | || ||||| ||||| ||| |||| ||| | ||
Sbjct 280202 TGCAAATCTTCGTCAAGACCCTCACGGGCAAGACCATCACCCTCGAGGTCGAGTCGTCCG 280143
Query 110334 ATACTGTCGGCCAGGTAAAACAGAAGATTGCCGACAAAGAAGGCGTGCCCGTGGATCAAC 110393
| || ||| | | || || ||||| ||||| |||||| | ||| || || |
Sbjct 280142 ACACGATCGACAACGTCAAGACCAAGATCCAGGACAAGGAAGGCATCCCCCCCGACCAGC 280083
Query 110394 AAAGACTTATTTATGCGGGTAAACAGCTGGAGGATGCCAGAACAATGGCGGATTACAACA 110453
|| | || || | ||| || || ||||| ||||||| | | || | |||||||||||||
Sbjct 280082 AACGTCTCATCTTTGCCGGCAAGCAGCTCGAGGATGGCCGCACGCTCGCGGATTACAACA 280023
Query 110454 TTCAAAAAGAATCTACGTTGCACATGGTGTTAAGACTGCGAGGGGG 110499
| ||||| || || ||| | ||| ||||| | | ||||| || ||
Sbjct 280022 TCCAAAAGGAGTCGACGCTCCACTTGGTGCTCCGCCTGCGTGGTGG 279977
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 412840789927373
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |