Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Microbotryum_20saponariae_20[genbank_20GCA_5F900015975.1_202016-12- 23] 161 sequences; 29,508,937 total letters Query= NC_024446.1 Length=306862 Score E Sequences producing significant alignments: (Bits) Value seq80 125 1e-23 >seq80 Length=1167844 Score = 125 bits (138), Expect = 1e-23 Identities = 165/229 (72%), Gaps = 0/229 (0%) Strand=Plus/Minus Query 82582 TACCTCCTCTCAAACGCAGAACTAAGTGCAGAGTAGATTCTTTCTGTATATTATAATCAG 82641 |||| |||| | || || || |||||||| || || || ||||| || || ||||| | Sbjct 547005 TACCACCTCGGAGGCGGAGCACCAAGTGCAGCGTCGACTCCTTCTGGATGTTGTAATCGG 546946 Query 82642 ATAGAATTCTACCGTCTTCTAGTTGTTTTCCAGCAAAGATTAGTCTTTGTTGATCTGGAG 82701 || | | || || || || || || || || ||||| || | |||||| ||||| | Sbjct 546945 CGAGCGTACGGCCATCCTCGAGCTGCTTGCCCGCGAAGATGAGACGTTGTTGGTCTGGGG 546886 Query 82702 GTATTCCTTCCTTATCTTGAATCTTTGCTTTTACATTTTCAATCGTATCATTAGGTTCTA 82761 | || || |||||||| |||||||| || ||||| || || ||||| || | || | Sbjct 546885 GAATGCCCTCCTTATCCTGAATCTTAGCCTTTACGTTGTCGATCGTGTCCGAGGACTCAA 546826 Query 82762 CTTCCAAAGTTATCGTCTTGCCTGTCAACGTCTTTACAAATATCTGCAT 82810 | || | || ||||||||||| || || ||||| ||||| || ||||| Sbjct 546825 CCTCAAGCGTGATCGTCTTGCCGGTTAAGGTCTTGACAAAGATTTGCAT 546777 Score = 116 bits (128), Expect = 7e-21 Identities = 162/227 (71%), Gaps = 0/227 (0%) Strand=Plus/Minus Query 82584 CCTCCTCTCAAACGCAGAACTAAGTGCAGAGTAGATTCTTTCTGTATATTATAATCAGAT 82643 || |||| | ||| || || |||||||| || || || ||||| || || || || | Sbjct 547231 CCGCCTCGGAGACGGAGCACCAAGTGCAGCGTCGACTCCTTCTGGATGTTGTAGTCGGCG 547172 Query 82644 AGAATTCTACCGTCTTCTAGTTGTTTTCCAGCAAAGATTAGTCTTTGTTGATCTGGAGGT 82703 || | | || || || || || || || || ||||| || | |||||| ||||| || Sbjct 547171 AGCGTACGGCCATCCTCGAGCTGCTTGCCCGCGAAGATGAGACGTTGTTGGTCTGGGGGA 547112 Query 82704 ATTCCTTCCTTATCTTGAATCTTTGCTTTTACATTTTCAATCGTATCATTAGGTTCTACT 82763 || || ||||| || |||||||| || || || || || ||||| || | || || Sbjct 547111 ATGCCCTCCTTGTCCTGAATCTTGGCCTTGACGTTGTCGATCGTGTCCGAGGACTCAACC 547052 Query 82764 TCCAAAGTTATCGTCTTGCCTGTCAACGTCTTTACAAATATCTGCAT 82810 || | || ||||||||||||||||| ||||| || || || ||||| Sbjct 547051 TCGAGCGTGATCGTCTTGCCTGTCAAGGTCTTGACGAAGATTTGCAT 547005 Score = 116 bits (128), Expect = 7e-21 Identities = 163/229 (71%), Gaps = 0/229 (0%) Strand=Plus/Minus Query 82582 TACCTCCTCTCAAACGCAGAACTAAGTGCAGAGTAGATTCTTTCTGTATATTATAATCAG 82641 |||| || | | ||| || || ||||| || || || || ||||| || || ||||| | Sbjct 789387 TACCACCACGGAGACGGAGCACCAAGTGGAGCGTCGACTCCTTCTGAATGTTGTAATCCG 789328 Query 82642 ATAGAATTCTACCGTCTTCTAGTTGTTTTCCAGCAAAGATTAGTCTTTGTTGATCTGGAG 82701 || | | || || || || || || || |||||||| || | |||||| ||||| | Sbjct 789327 CGAGCGTGCGGCCATCCTCGAGCTGCTTGCCCGCAAAGATGAGACGTTGTTGGTCTGGGG 789268 Query 82702 GTATTCCTTCCTTATCTTGAATCTTTGCTTTTACATTTTCAATCGTATCATTAGGTTCTA 82761 | || || ||||| ||||| ||||| | || ||||| |||||||| || | || | Sbjct 789267 GAATACCCTCCTTGTCTTGGATCTTGGTCTTGACATTGTCAATCGTGTCCGAGGACTCGA 789208 Query 82762 CTTCCAAAGTTATCGTCTTGCCTGTCAACGTCTTTACAAATATCTGCAT 82810 | || | || ||||||||||| || | |||||| || || || ||||| Sbjct 789207 CCTCGAGGGTGATCGTCTTGCCCGTAAGCGTCTTGACGAAGATTTGCAT 789159 Score = 111 bits (122), Expect = 3e-19 Identities = 154/216 (71%), Gaps = 0/216 (0%) Strand=Plus/Minus Query 82595 ACGCAGAACTAAGTGCAGAGTAGATTCTTTCTGTATATTATAATCAGATAGAATTCTACC 82654 |||||| || ||||| || || || || ||||| || || ||||| | || | | || Sbjct 789602 ACGCAGCACCAAGTGGAGCGTCGACTCCTTCTGAATGTTGTAATCCGCGAGCGTGCGGCC 789543 Query 82655 GTCTTCTAGTTGTTTTCCAGCAAAGATTAGTCTTTGTTGATCTGGAGGTATTCCTTCCTT 82714 || || || || || || || ||||| | || || || ||||| || || |||||||| Sbjct 789542 ATCCTCGAGCTGCTTGCCCGCGAAGATCAATCGCTGCTGGTCTGGGGGAATGCCTTCCTT 789483 Query 82715 ATCTTGAATCTTTGCTTTTACATTTTCAATCGTATCATTAGGTTCTACTTCCAAAGTTAT 82774 ||||||||||| | || ||||| || ||||| || | || || || | || || Sbjct 789482 GTCTTGAATCTTGGTCTTGACATTGTCGATCGTGTCCGAGGACTCGACCTCGAGGGTGAT 789423 Query 82775 CGTCTTGCCTGTCAACGTCTTTACAAATATCTGCAT 82810 ||||||||| || | |||||| || || || ||||| Sbjct 789422 CGTCTTGCCCGTAAGCGTCTTGACGAAGATTTGCAT 789387 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 981825174674579