Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Microbotryum_20saponariae_20[genbank_20GCA_5F900015975.1_202016-12- 23] 161 sequences; 29,508,937 total letters Query= NC_024625.1 Length=151109 Score E Sequences producing significant alignments: (Bits) Value seq85 333 3e-86 seq56 138 1e-27 seq105 136 4e-27 seq80 134 1e-26 seq114 89.7 5e-13 >seq85 Length=404085 Score = 333 bits (368), Expect = 3e-86 Identities = 840/1255 (67%), Gaps = 33/1255 (3%) Strand=Plus/Plus Query 148532 CGCCAGTTCGCAGCTCGCCTCGAGCGCGCCGTAGTAAATCGTCTCGGCAATTTGCCTGTT 148591 ||||| ||||| || ||||| |||| ||| ||| || |||||| || ||| |||| Sbjct 380047 CGCCATGTCGCACGACGACTCGATCGCGGCGTGGTAGATGGTCTCGAAGATCTGCTTGTT 380106 Query 148592 GAGCA-GCGCCGCCGACTCGCTT---TCGTACGGCATACGCAGCCGCACAAACGCGTCGG 148647 |||| |||| | |||| | ||| ||||||| || | || |||||||||| Sbjct 380107 GAGCTTGCGC----GCCTCGGGTGAATCGAACGGCATCGCCAACGCCATGAACGCGTCGG 380162 Query 148648 CAAGGCCCTGTACGCCCACGCCAATGGGCCGGTGTTTAATGTTGGAGAGGCGCGCGCTCT 148707 | || || || || || | ||| ||||| ||||| | ||||||| |||| ||| Sbjct 380163 CGAGACCTTGCACTCCGATGCCGATGGGGCGGTGGCGGAAGTTGGAGTTCTGCGC-CTCG 380221 Query 148708 C-GAGCGGATAGTGGTTGCGGTCGATGATCTTGT-CAAGATTGCGCACCACCACCTTTGT 148765 || ||||||| |||| ||||||||| || |||| ||| | || ||||| Sbjct 380222 ATGACGGGATAGTAGTTGACGTCGATGATGCGGTTCAAG-TTGAAAGCGACGACCTTGAC 380280 Query 148766 AATTCTGCGCAGCAATTCAAAATCGTACTTGTCATCTACGATGCA--TCGGTTCACGGCG 148823 | | ||| | | ||| |||||| | | | |||| | |||| || ||| Sbjct 380281 GACCTCGTGCAACTTCTTAAAGTCGTACACGCCGTTCTTGATGAAGCTCGG--CAACGCG 380338 Query 148824 ATAGAGGCTAGATTGCACACGGCCGTCTCATCCGGGGCGCTGTACTCTACGATCTCGGCG 148883 || ||||| | ||||| ||||| |||||| || || |||||| | |||||||| | Sbjct 380339 ATCGAGGCCAAGTTGCAGACGGCGCACTCATCGGGCGCCGAGTACTCGATGATCTCGGTG 380398 Query 148884 CACAGATTGCTGCATTTGATCACGCCCACGTTCTTTTGATTGCTCTTGCTGTTGCACGCG 148943 |||| || | |||||| ||| | ||||||||| || || |||| ||| Sbjct 380399 CACAAGTTCGACGACTTGATCGTGCCAAGGTTCTTTTGGTTCGATTTTTTGTTTGCGGCG 380458 Query 148944 TCCTTGTACAGCATGTACGGTCCGCCAGTTTCCACCTGCGTTTCCACTAT---GAACCGA 149000 |||||||| |||||| |||| ||| ||||| ||||| | ||| | || | ||| | Sbjct 380459 TCCTTGTAGAGCATGAACGGGTTGCCGGTTTCGACCTGGGCTTCAAGAATCGCGTACCAA 380518 Query 149001 TGCAGGTCCTGCGCGCGCACTTGCTGCTCGTAGCGACCCTCCTGCTCGTATAAAGTATAC 149060 || | |||||| | | || || | ||| ||||||| |||||| || Sbjct 380519 AGC---TTTTGCGCGGGGATCGTCTTCTTGGCGCGGCCCTCCTTTTCGTATTTCTCGAAC 380575 Query 149061 A-GCCGCTCGAACGCCTCGCCGTAGCAATCGTCGAGACCGGGGCACTTGTGCGGG-CACA 149118 | | ||| |||| | ||||| ||| |||| ||| |||||| ||| ||||| || | Sbjct 380576 AAGGCGCG-GAACTCTTCGCCATAGACTTCGTGGAGGCCGGGGG-CTTCAGCGGGGCAGA 380633 Query 149119 TGAGCGACCACACGCCGTCCGCGTACACGCGCTTCATAAACAGATCGGGCACCCAGAGCG 149178 ||| | |||| ||| | | || | || |||| ||||||||||||||| | |||||||| Sbjct 380634 AGAGGGGCCACTCGCTGGCGGCCTCGACACGCTCCATAAACAGATCGGGAATCCAGAGCG 380693 Query 149179 CGTACATGAGGTCGCGCGCCTTGCAGTCTTCGGCGCCCATGTTGCGGCGCAGGTTGAGCA 149238 | | | ||| || || || | || || ||| ||| ||| |||| || | Sbjct 380694 CAAAGAAGAGATCACGAGCGCGGACCTCCTCCTTGCCGTGGTTCTTGCGAAGGTCCAGGA 380753 Query 149239 CGCTGAATATGTCCGCGTGCCACGGCTCAATGTACACCGCGAGCGCGCCCTTGCGCTTG- 149297 ||| | ||| |||||||| ||||| | ||| | ||||| || || |||||| Sbjct 380754 ACTCGAAGACGTCAGCGTGCCATGGCTCGAGGTAGATCGCGAAGGCTCCGGGACGCTTGT 380813 Query 149298 --CCGCCCTGGTCGACGTGGCGCACCATGTTGTTAAACACTCGAACCATAGGTTCAATGC 149355 || || |||||||||| |||| | ||||||| | || || | ||| || | |||| Sbjct 380814 TGCCACCTTGGTCGACGTAGCGCGCGGTGTTGTTGTAGACACGGAGCATGGGGACGATGC 380873 Query 149356 CACTGGCAGT-GCCGTTAGTAGAGCTAATGCGACTGCCGCGCGCTCGCACTTTGTGCACG 149414 | | | ||| |||||| || | ||| | |||| ||| || | ||||| | | Sbjct 380874 CGTTCG-AGTAGCCGTTCGTGCCGGCGATGTAAGAGCCGGTCGCGCGGATGTTGTGGATG 380932 Query 149415 TTGACGCCGATGCCGCCGCCGTACTTTGAGATGGCCGCGCA-GTCGCCGAGCGTCGAGTA 149473 | | ||||| || ||| || ||| |||||| |||||| ||| |||||| ||| Sbjct 380933 CTCAAACCGATACCACCGGCGGTCTTGGAGATGAGCGCGCACGTCTT-GAGCGTGTCGTA 380991 Query 149474 GATGCCCTCGATGCTGTCGCGCTTCATGGTCAGCAGAAAGCACGAGCACATTTGCGGAAA 149533 |||||| ||||| |||| ||||||||| | ||| || ||||| | | ||||| Sbjct 380992 GATGCCTTCGATCGAGTCGTCCTTCATGGTGACCAGGAAACACGACGAAAGCTGCGGGTG 381051 Query 149534 ACGCGTGCCGGCCGCGAACATGGTGGGGCTGGCGTGTGTAAAATATTTCTGGCTCATCAT 149593 | |||| ||||| ||| | || || |||||| ||||| || || | ||| | Sbjct 381052 AGGCGTTCCGGCGTTGAAGAGCGTCGGCGAGGCGTGGGTAAAGTAGCGCTCGGACATGAG 381111 Query 149594 CTCGTACGACTCGAGCACGCGGTCCATGTCATCGCCATGGATGCCTATGGCGACGCGCAT 149653 | |||||||| | ||||| || ||||| | || |||||||| | |||||||||||| Sbjct 381112 GTTGTACGACTGCAAGACGCGCTCGATGTCGTGACCGTGGATGCCGACGGCGACGCGCAT 381171 Query 149654 CAGCATATGCTGCGGTCGCTCCGCCACTTTGTTTCCAATTTTGAGCAAGTAGCCGTTTTC 149713 ||||| || ||||| || || || || ||| | || ||||||||| | || Sbjct 381172 GAGCATGTGTTGCGGGCGTTCGGCGACCTTGCCGTCGATGCGAAGCAAGTAGGAGCGCTC 381231 Query 149714 TAGTGTCTTGTAGCCAAAGTACTTGTAGTCAAAGTCGCGGCCGTGGTCAATGGCG 149768 || |||||| |||||||||| |||||| | || |||||| ||| | || |||| Sbjct 381232 GAGCGTCTTGAAGCCAAAGTAGTTGTAGCCGAAATCGCGGTCGTAGATAACGGCG 381286 >seq56 Length=195491 Score = 138 bits (152), Expect = 1e-27 Identities = 157/208 (75%), Gaps = 2/208 (1%) Strand=Plus/Minus Query 133455 AAATGTATGGTGGACTCTTTCTGTATATTGTAATCGCCCATCGTG-GACGAGTCCTCGAG 133513 || || | ||| ||||| || || || ||||| ||| ||| ||| | | | |||||||| Sbjct 107507 AAGTGGAGGGTCGACTCCTTTTGGATGTTGTAGTCGGCCAAGGTGCGGCCA-TCCTCGAG 107449 Query 133514 CTGCTTGCCCGCGTAAATGAGCCGCTGCTGGTCGGGAGGGATGCCTTCCTTGTCGGTGAT 133573 ||||||||| ||| | ||||| || |||||||| || ||||||||||||||||| ||| Sbjct 107448 CTGCTTGCCGGCGAAGATGAGACGTTGCTGGTCTGGGGGGATGCCTTCCTTGTCTTGGAT 107389 Query 133574 CTTTTGCTTGAGCTGCTCAACCGTGTCGGTGGGCTCCACGTCGACGGTGACGGTTTTGCC 133633 ||| ||||| | || | |||||||| | ||| || |||| ||||| || ||||| Sbjct 107388 CTTGGTCTTGACGTTGTCGATCGTGTCGGACGACTCGACCTCGAGGGTGATCGTCTTGCC 107329 Query 133634 GGTCAGAGTTTTTACGAAAATCTGCATG 133661 || ||||| || ||||| || ||| || Sbjct 107328 CGTAAGAGTCTTGACGAAGATTTGCCTG 107301 >seq105 Length=561522 Score = 136 bits (150), Expect = 4e-27 Identities = 150/197 (76%), Gaps = 2/197 (1%) Strand=Plus/Plus Query 133464 GTGGACTCTTTCTGTATATTGTAATCGCCCATCGTG-GACGAGTCCTCGAGCTGCTTGCC 133522 || ||||| || || || |||||||| | | |||| | | | ||||||||||||||||| Sbjct 280007 GTCGACTCCTTTTGGATGTTGTAATCCGCGAGCGTGCGGCCA-TCCTCGAGCTGCTTGCC 280065 Query 133523 CGCGTAAATGAGCCGCTGCTGGTCGGGAGGGATGCCTTCCTTGTCGGTGATCTTTTGCTT 133582 || | ||||| || ||||||||||| ||||||||||||||||| |||||| ||| Sbjct 280066 GGCAAAGATGAGACGTTGCTGGTCGGGGGGGATGCCTTCCTTGTCCTGGATCTTGGTCTT 280125 Query 133583 GAGCTGCTCAACCGTGTCGGTGGGCTCCACGTCGACGGTGACGGTTTTGCCGGTCAGAGT 133642 || | || | |||||||| | ||| || |||| ||||| ||| ||||| || || || Sbjct 280126 GACGTTGTCGATCGTGTCGGACGACTCGACCTCGAGGGTGATGGTCTTGCCCGTGAGGGT 280185 Query 133643 TTTTACGAAAATCTGCA 133659 || ||||| || |||| Sbjct 280186 CTTGACGAAGATTTGCA 280202 >seq80 Length=1167844 Score = 134 bits (148), Expect = 1e-26 Identities = 150/198 (76%), Gaps = 2/198 (1%) Strand=Plus/Minus Query 133464 GTGGACTCTTTCTGTATATTGTAATCGCCCATCGTG-GACGAGTCCTCGAGCTGCTTGCC 133522 || ||||| ||||| || |||||||| | | |||| | | | ||||||||||||||||| Sbjct 789127 GTCGACTCCTTCTGAATGTTGTAATCCGCGAGCGTGCGGCCA-TCCTCGAGCTGCTTGCC 789069 Query 133523 CGCGTAAATGAGCCGCTGCTGGTCGGGAGGGATGCCTTCCTTGTCGGTGATCTTTTGCTT 133582 ||| | ||||| || || ||||| || || || || |||||||| |||||| ||| Sbjct 789068 CGCAAAGATGAGACGTTGTTGGTCTGGGGGAATACCCTCCTTGTCTTGGATCTTGGTCTT 789009 Query 133583 GAGCTGCTCAACCGTGTCGGTGGGCTCCACGTCGACGGTGACGGTTTTGCCGGTCAGAGT 133642 || | |||| |||||| | || ||| || |||| ||||| ||| |||||||||| || Sbjct 789008 GACATTGTCAATCGTGTCCGAGGACTCGACCTCGAGGGTGATGGTCTTGCCGGTCAAGGT 788949 Query 133643 TTTTACGAAAATCTGCAT 133660 || ||||| || ||||| Sbjct 788948 CTTGACGAAGATTTGCAT 788931 Score = 129 bits (142), Expect = 6e-25 Identities = 149/198 (75%), Gaps = 2/198 (1%) Strand=Plus/Minus Query 133464 GTGGACTCTTTCTGTATATTGTAATCGCCCATCGTG-GACGAGTCCTCGAGCTGCTTGCC 133522 || ||||| ||||| || |||||||| | | |||| | | | ||||||||||||||||| Sbjct 789583 GTCGACTCCTTCTGAATGTTGTAATCCGCGAGCGTGCGGCCA-TCCTCGAGCTGCTTGCC 789525 Query 133523 CGCGTAAATGAGCCGCTGCTGGTCGGGAGGGATGCCTTCCTTGTCGGTGATCTTTTGCTT 133582 |||| | || | ||||||||||| || || |||||||||||||| ||||| ||| Sbjct 789524 CGCGAAGATCAATCGCTGCTGGTCTGGGGGAATGCCTTCCTTGTCTTGAATCTTGGTCTT 789465 Query 133583 GAGCTGCTCAACCGTGTCGGTGGGCTCCACGTCGACGGTGACGGTTTTGCCGGTCAGAGT 133642 || | || | |||||| | || ||| || |||| ||||| || ||||| || || || Sbjct 789464 GACATTGTCGATCGTGTCCGAGGACTCGACCTCGAGGGTGATCGTCTTGCCCGTAAGCGT 789405 Query 133643 TTTTACGAAAATCTGCAT 133660 || ||||| || ||||| Sbjct 789404 CTTGACGAAGATTTGCAT 789387 Score = 125 bits (138), Expect = 7e-24 Identities = 148/198 (75%), Gaps = 2/198 (1%) Strand=Plus/Minus Query 133464 GTGGACTCTTTCTGTATATTGTAATCGCCCATCGTG-GACGAGTCCTCGAGCTGCTTGCC 133522 || ||||| ||||| || |||||||| | | |||| | | | ||||||||||||||||| Sbjct 789355 GTCGACTCCTTCTGAATGTTGTAATCCGCGAGCGTGCGGCCA-TCCTCGAGCTGCTTGCC 789297 Query 133523 CGCGTAAATGAGCCGCTGCTGGTCGGGAGGGATGCCTTCCTTGTCGGTGATCTTTTGCTT 133582 ||| | ||||| || || ||||| || || || || |||||||| |||||| ||| Sbjct 789296 CGCAAAGATGAGACGTTGTTGGTCTGGGGGAATACCCTCCTTGTCTTGGATCTTGGTCTT 789237 Query 133583 GAGCTGCTCAACCGTGTCGGTGGGCTCCACGTCGACGGTGACGGTTTTGCCGGTCAGAGT 133642 || | |||| |||||| | || ||| || |||| ||||| || ||||| || || || Sbjct 789236 GACATTGTCAATCGTGTCCGAGGACTCGACCTCGAGGGTGATCGTCTTGCCCGTAAGCGT 789177 Query 133643 TTTTACGAAAATCTGCAT 133660 || ||||| || ||||| Sbjct 789176 CTTGACGAAGATTTGCAT 789159 Score = 116 bits (128), Expect = 4e-21 Identities = 146/198 (74%), Gaps = 2/198 (1%) Strand=Plus/Minus Query 133464 GTGGACTCTTTCTGTATATTGTAATCGCCCATCGTG-GACGAGTCCTCGAGCTGCTTGCC 133522 || ||||| ||||| || ||||| ||| | | ||| | | | ||||||||||||||||| Sbjct 547201 GTCGACTCCTTCTGGATGTTGTAGTCGGCGAGCGTACGGCCA-TCCTCGAGCTGCTTGCC 547143 Query 133523 CGCGTAAATGAGCCGCTGCTGGTCGGGAGGGATGCCTTCCTTGTCGGTGATCTTTTGCTT 133582 |||| | ||||| || || ||||| || || ||||| |||||||| ||||| ||| Sbjct 547142 CGCGAAGATGAGACGTTGTTGGTCTGGGGGAATGCCCTCCTTGTCCTGAATCTTGGCCTT 547083 Query 133583 GAGCTGCTCAACCGTGTCGGTGGGCTCCACGTCGACGGTGACGGTTTTGCCGGTCAGAGT 133642 || | || | |||||| | || ||| || |||| |||| || ||||| |||| || Sbjct 547082 GACGTTGTCGATCGTGTCCGAGGACTCAACCTCGAGCGTGATCGTCTTGCCTGTCAAGGT 547023 Query 133643 TTTTACGAAAATCTGCAT 133660 || ||||| || ||||| Sbjct 547022 CTTGACGAAGATTTGCAT 547005 Score = 102 bits (112), Expect = 8e-17 Identities = 143/198 (72%), Gaps = 2/198 (1%) Strand=Plus/Minus Query 133464 GTGGACTCTTTCTGTATATTGTAATCGCCCATCGTG-GACGAGTCCTCGAGCTGCTTGCC 133522 || ||||| ||||| || ||||||||| | | ||| | | | ||||||||||||||||| Sbjct 546973 GTCGACTCCTTCTGGATGTTGTAATCGGCGAGCGTACGGCCA-TCCTCGAGCTGCTTGCC 546915 Query 133523 CGCGTAAATGAGCCGCTGCTGGTCGGGAGGGATGCCTTCCTTGTCGGTGATCTTTTGCTT 133582 |||| | ||||| || || ||||| || || ||||| ||||| || ||||| ||| Sbjct 546914 CGCGAAGATGAGACGTTGTTGGTCTGGGGGAATGCCCTCCTTATCCTGAATCTTAGCCTT 546855 Query 133583 GAGCTGCTCAACCGTGTCGGTGGGCTCCACGTCGACGGTGACGGTTTTGCCGGTCAGAGT 133642 | | || | |||||| | || ||| || || | |||| || |||||||| | || Sbjct 546854 TACGTTGTCGATCGTGTCCGAGGACTCAACCTCAAGCGTGATCGTCTTGCCGGTTAAGGT 546795 Query 133643 TTTTACGAAAATCTGCAT 133660 || || || || ||||| Sbjct 546794 CTTGACAAAGATTTGCAT 546777 >seq114 Length=2116821 Score = 89.7 bits (98), Expect = 5e-13 Identities = 180/259 (69%), Gaps = 15/259 (6%) Strand=Plus/Plus Query 120494 ACTCGCACATGGACTGCGCGTTCATGCCCAGCAA--CGCCACCGGCAACGCCGACGTGAA 120551 ||| ||||||| || || |||||||| | ||| ||| | || | ||| || || Sbjct 1948292 ACTGGCACATGAGCTTGGCATTCATGCCGATCAAACCGCAA--GGAAGAGCCTCGGTCAA 1948349 Query 120552 AAACTCCTTCTCAATGTCCACCGCCTCCTTGAACATG-GCGAGCATAGTGTGGCCGGGCA 120610 || |||||||| || || || || ||||| | ||| ||| | | ||| | ||| Sbjct 1948350 GAATTCCTTCTCGATCTCGACGGCTTCCTTAATGATGAGCGCG---ACGGTGTCGGGG-- 1948404 Query 120611 TCTTGTGTTCGATGCGCGTTCGGTAGTACA---GGCACGCAAAGTCCGTGTGCAGGCCCT 120667 | || |||| | || | | || || ||| |||| |||||||| ||||| ||||||| Sbjct 1948405 TGAGGTCTTCGCT-CGAGGTGGG-AGAACAAGAGGCAAGCAAAGTCGGTGTGAAGGCCCT 1948462 Query 120668 CGTCGCGCGATATCAGCTCGTTGCTAAACGTCAGGCCGGGCATGATGCCTTTCGTCTTGA 120727 |||| ||||| || ||||||||| || |||| |||||||| | ||| | |||||| Sbjct 1948463 CGTCACGCGAAATGAGCTCGTTGGAGAAGGTCAATCCGGGCATCAAGCCACGCTTCTTGA 1948522 Query 120728 TGTAGAATATGGCGGCAAA 120746 |||| |||| ||||| Sbjct 1948523 GCCAGAAGATGGAAGCAAA 1948541 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 483419827115640