Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Microbotryum_20saponariae_20[genbank_20GCA_5F900015975.1_202016-12- 23] 161 sequences; 29,508,937 total letters Query= NC_028091.1 Length=196300 Score E Sequences producing significant alignments: (Bits) Value seq85 161 1e-34 seq69 158 2e-33 seq88 125 9e-24 >seq85 Length=404085 Score = 161 bits (178), Expect = 1e-34 Identities = 551/856 (64%), Gaps = 11/856 (1%) Strand=Plus/Plus Query 111236 GCGATTGATGCCAAATTGCAAACAGCCGTCTCATCCTTATCTGTGTACTCTAAAATTTCT 111295 ||||| || ||||| ||||| || || |||||| | | |||||| | || || Sbjct 380336 GCGATCGAGGCCAAGTTGCAGACGGCGCACTCATCGGGCGCCGAGTACTCGATGATCTCG 380395 Query 111296 GTACATAAGTTGGAACTCTTAATCGTCCCCAAATTCTTTTGGTTACTCTTCTTGTTGCAC 111355 || || ||||| || ||| ||||| || | ||||||||||| || ||||| Sbjct 380396 GTGCACAAGTTCGACGACTTGATCGTGCCAAGGTTCTTTTGGTTCGATTTTTTGTTTGCG 380455 Query 111356 GCATCCTTGTAGAGCATGTAGGGCGTCCCCGTCTCCGTCTGTGATTTGAGAATAGCCTTC 111415 || ||||||||||||||| | || | || || || ||| | || ||||| || | | Sbjct 380456 GCGTCCTTGTAGAGCATGAACGGGTTGCCGGTTTCGACCTGGGCTTCAAGAATCGCGTAC 380515 Query 111416 CAAA-CATCGGCGGCTGGTACAATGGCGTTGGCCCGTCCCTCCGCCTCGTACTTTGTGTA 111474 |||| | | ||| | || | | ||||| || |||||| ||||| || | | Sbjct 380516 CAAAGCTTTTGCG-CGGGGATCGTCTTCTTGGCGCGGCCCTCCTTTTCGTATTTCTCGAA 380574 Query 111475 GAGGGCTTCAAACTCCTCACCCACCGCGTCGGAGAGACCTGGTGCCTTGTCTGGACAGAA 111534 | ||| ||||| || || | ||| ||| || || || | | || ||||| Sbjct 380575 CAAGGCGCGGAACTCTTCGCCATAGACTTCGTGGAGGCCGGGGGCTTCAGCGGGGCAGAA 380634 Query 111535 AAGAGACCATTGACCACCTTCCTCAACCCGCTTCATGAAAAGGTCTGGAATCCACAGGGA 111594 || | ||| | | | |||| || |||| ||| || || || |||||||| || | Sbjct 380635 GAGGGGCCACTCGCTGGCGGCCTCGACACGCTCCATAAACAGATCGGGAATCCAGAGCGC 380694 Query 111595 TGAAAAGAGATCTCTACACCGAGCCTCTTCGTCACCTTGGTTGAGTCGTAACTCAAGGAA 111654 | |||||||| | | || |||| || | || ||||| || | || ||||| Sbjct 380695 AAAGAAGAGATCACGAGCGCGGACCTCCTCCTTGCCGTGGTTCTTGCGAAGGTCCAGGAA 380754 Query 111655 CTCCATGATATCCGCGTGCCATGGCTCAAGATAGACTGCGATAGATCCCTTTCGACGC-- 111712 ||| | || || |||||||||||||| || |||| |||| | ||| ||||| Sbjct 380755 CTCGAAGACGTCAGCGTGCCATGGCTCGAGGTAGATCGCGAAGGCTCCGG---GACGCTT 380811 Query 111713 ----CCAGCTTGATTTACATAGCGCGCTGTGGCGTTAAATACGCGAAGCATTGGAATAAT 111768 ||| |||| | || |||||||| ||| ||| | || || ||||| || | || Sbjct 380812 GTTGCCACCTTGGTCGACGTAGCGCGCGGTGTTGTTGTAGACACGGAGCATGGGGACGAT 380871 Query 111769 ACCATCTGATTGACCATTTGTCCCCCGAATACGAGATTTATTGGCTCTCACATCATGGAT 111828 || | || | || || || || || ||| | || | | | ||||| Sbjct 380872 GCCGTTCGAGTAGCCGTTCGTGCCGGCGATGTAAGAGCCGGTCGCGCGGATGTTGTGGAT 380931 Query 111829 GTGCATCCCAATACCCCCAGCCCACTTTGAGATTTGCGCACACTCCGTAAGAGTTCCATA 111888 | || || ||||| || || ||| ||||| |||| ||| | | || || | || Sbjct 380932 GCTCAAACCGATACCACCGGCGGTCTTGGAGATGAGCGCGCACGTCTTGAGCGTGTCGTA 380991 Query 111889 GATACCGTTGATTGAGTCCTCCTTGTTGGCGATAAGGAAGCAACTGGACATCTGCGGTCT 111948 ||| || | ||| ||||| ||||| ||| || ||||| || || | |||||| Sbjct 380992 GATGCCTTCGATCGAGTCGTCCTTCATGGTGACCAGGAAACACGACGAAAGCTGCGGGTG 381051 Query 111949 TGGTGTACCAGCATTGAAGAGGGTTGGTGTTGCGTGAATGAACATACCTTGGGACATCTT 112008 || || || || |||||||| || || | ||||| | || | | |||||| Sbjct 381052 AGGCGTTCCGGCGTTGAAGAGCGTCGGCGAGGCGTGGGTAAAGTAGCGCTCGGACATGAG 381111 Query 112009 GTCGTATGTCTCCAAGACAGAATCAATGTCTTCCCCGTGGATGCCGATTGCGACCCGCAT 112068 || ||| | || |||||| || ||||| | ||||||||||||| ||||| ||||| Sbjct 381112 GTTGTACGACTGCAAGACGCGCTCGATGTCGTGACCGTGGATGCCGACGGCGACGCGCAT 381171 Query 112069 GAACATGTACTGTGGG 112084 || ||||| || ||| Sbjct 381172 GAGCATGTGTTGCGGG 381187 >seq69 Length=186160 Score = 158 bits (174), Expect = 2e-33 Identities = 273/394 (69%), Gaps = 2/394 (1%) Strand=Plus/Plus Query 9155 CCGCATCTATCAAGCCTCTTCCTCAGAGATGTTTGGTAAGGTTAAGGAGTCACCACAAAA 9214 |||| | || |||||||| |||| ||| ||| || ||||| || | || ||| Sbjct 82218 CCGCTTTTACCAAGCCTCGACCTCCGAGTTGTACGGCAAGGTCGTCGAAACCCCTCAATC 82277 Query 9215 CGAGGAGACACCCTTCTACCCACGCTCGGTCTACGGAGTCTCAAAGGTTGCGGCACATTG 9274 |||| ||||||||||||||| || ||| ||||||||| | ||| | || || Sbjct 82278 CGAGACGACACCCTTCTACCCTCGTTCGCCTTACGGAGTCGCCAAGTTGTACGCCTTCTG 82337 Query 9275 GCTCGTCAAAAATTACCGCGAGTCTTACGGACTGTTTGCGTGCTCCGGAATCCTCTTCAA 9334 | ||||||| || ||||||||||| |||| ||| || ||| ||| ||| | ||||| Sbjct 82338 GATCGTCAAGAACTACCGCGAGTCGTACGACATGTACGCCTGCAACGGCATCTTGTTCAA 82397 Query 9335 CCATGAATCACCGAGACGAGGT-GCAGACTTTGTGACCATGAAGATTACCGAGGGTATCA 9393 ||| || || ||| | || ||| ||| |||||| || | ||||||| || | | || Sbjct 82398 CCACGAGTCCCCGCGTCGTGGTCGCA-CCTTTGTCACGAGGAAGATTTCCCGAGCTGTCG 82456 Query 9394 AACAAATCATGAAGGGTGAAAAGGAGTTCATTGAATTGGGTAACATAAACGCGGAGAGAG 9453 | ||| | ||| || |||| | | || | | || ||||| | || || | | Sbjct 82457 CCGAGATCTCGCTCGGTCAACAGGACTGCCTTTACCTCGGCAACATGGAGGCCAAGCGTG 82516 Query 9454 ATTGGGGTCACGCGAAGGACTATGTTGAAGCTATGTGGCTCATGCTTCAACAAGAGGAAG 9513 ||||||| |||||| ||||| || || | ||||||| | ||||| || ||||| Sbjct 82517 ATTGGGGACACGCGCGCGACTACGTCGAGGGTATGTGGATGATGCTGCAGCAAGACACCC 82576 Query 9514 CCGACGAATATGTAGTAGCAACGGGTGAGACCCA 9547 ||||||| | ||| | || |||||||||||||| Sbjct 82577 CCGACGACTTTGTCCTCGCGACGGGTGAGACCCA 82610 >seq88 Length=463073 Score = 125 bits (138), Expect = 9e-24 Identities = 165/226 (73%), Gaps = 2/226 (1%) Strand=Plus/Minus Query 9155 CCGCATCTATCAAGCCTCTTCCTCAGAGATGTTTGGTAAGGTTAAGGAGTCACCACAAAA 9214 |||| |||| |||||||| |||| ||| ||| || ||||| ||| | || || Sbjct 326097 CCGCTTCTACCAAGCCTCGACCTCGGAGTTGTACGGCAAGGTCGTCGAGACCCCTCAGTC 326038 Query 9215 CGAGGAGACACCCTTCTACCCACGCTCGGTCTACGGAGTCTCAAAGGTTGCGGCACATTG 9274 |||| ||| ||||||||||| |||||| |||||||||| | ||| | || || Sbjct 326037 CGAGACGACCCCCTTCTACCCTCGCTCGCCCTACGGAGTCGCCAAGCTGTACGCCTTCTG 325978 Query 9275 GCTCGTCAAAAATTACCGCGAGTCTTACGGACTGTTTGCGTGCTCCGGAATCCTCTTCAA 9334 | ||||||| || ||||||||||| ||||| ||| |||||| ||| ||||||||||| Sbjct 325977 GATCGTCAAGAACTACCGCGAGTCGTACGGCATGTACGCGTGCAACGGTATCCTCTTCAA 325918 Query 9335 CCATGAATCACCGAGACGAGG-TGCAGACTTTGTGACCATGAAGAT 9379 ||| || || || | || || ||| |||||| |||| ||||| Sbjct 325917 CCACGAGTCCCCCCGCCGTGGCCGCA-CCTTTGTCACCAGAAAGAT 325873 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 628030736085600