Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Microbotryum_20saponariae_20[genbank_20GCA_5F900015975.1_202016-12-
23] 161 sequences; 29,508,937 total letters
Query= NC_028091.1
Length=196300
Score E
Sequences producing significant alignments: (Bits) Value
seq85 161 1e-34
seq69 158 2e-33
seq88 125 9e-24
>seq85
Length=404085
Score = 161 bits (178), Expect = 1e-34
Identities = 551/856 (64%), Gaps = 11/856 (1%)
Strand=Plus/Plus
Query 111236 GCGATTGATGCCAAATTGCAAACAGCCGTCTCATCCTTATCTGTGTACTCTAAAATTTCT 111295
||||| || ||||| ||||| || || |||||| | | |||||| | || ||
Sbjct 380336 GCGATCGAGGCCAAGTTGCAGACGGCGCACTCATCGGGCGCCGAGTACTCGATGATCTCG 380395
Query 111296 GTACATAAGTTGGAACTCTTAATCGTCCCCAAATTCTTTTGGTTACTCTTCTTGTTGCAC 111355
|| || ||||| || ||| ||||| || | ||||||||||| || |||||
Sbjct 380396 GTGCACAAGTTCGACGACTTGATCGTGCCAAGGTTCTTTTGGTTCGATTTTTTGTTTGCG 380455
Query 111356 GCATCCTTGTAGAGCATGTAGGGCGTCCCCGTCTCCGTCTGTGATTTGAGAATAGCCTTC 111415
|| ||||||||||||||| | || | || || || ||| | || ||||| || | |
Sbjct 380456 GCGTCCTTGTAGAGCATGAACGGGTTGCCGGTTTCGACCTGGGCTTCAAGAATCGCGTAC 380515
Query 111416 CAAA-CATCGGCGGCTGGTACAATGGCGTTGGCCCGTCCCTCCGCCTCGTACTTTGTGTA 111474
|||| | | ||| | || | | ||||| || |||||| ||||| || | |
Sbjct 380516 CAAAGCTTTTGCG-CGGGGATCGTCTTCTTGGCGCGGCCCTCCTTTTCGTATTTCTCGAA 380574
Query 111475 GAGGGCTTCAAACTCCTCACCCACCGCGTCGGAGAGACCTGGTGCCTTGTCTGGACAGAA 111534
| ||| ||||| || || | ||| ||| || || || | | || |||||
Sbjct 380575 CAAGGCGCGGAACTCTTCGCCATAGACTTCGTGGAGGCCGGGGGCTTCAGCGGGGCAGAA 380634
Query 111535 AAGAGACCATTGACCACCTTCCTCAACCCGCTTCATGAAAAGGTCTGGAATCCACAGGGA 111594
|| | ||| | | | |||| || |||| ||| || || || |||||||| || |
Sbjct 380635 GAGGGGCCACTCGCTGGCGGCCTCGACACGCTCCATAAACAGATCGGGAATCCAGAGCGC 380694
Query 111595 TGAAAAGAGATCTCTACACCGAGCCTCTTCGTCACCTTGGTTGAGTCGTAACTCAAGGAA 111654
| |||||||| | | || |||| || | || ||||| || | || |||||
Sbjct 380695 AAAGAAGAGATCACGAGCGCGGACCTCCTCCTTGCCGTGGTTCTTGCGAAGGTCCAGGAA 380754
Query 111655 CTCCATGATATCCGCGTGCCATGGCTCAAGATAGACTGCGATAGATCCCTTTCGACGC-- 111712
||| | || || |||||||||||||| || |||| |||| | ||| |||||
Sbjct 380755 CTCGAAGACGTCAGCGTGCCATGGCTCGAGGTAGATCGCGAAGGCTCCGG---GACGCTT 380811
Query 111713 ----CCAGCTTGATTTACATAGCGCGCTGTGGCGTTAAATACGCGAAGCATTGGAATAAT 111768
||| |||| | || |||||||| ||| ||| | || || ||||| || | ||
Sbjct 380812 GTTGCCACCTTGGTCGACGTAGCGCGCGGTGTTGTTGTAGACACGGAGCATGGGGACGAT 380871
Query 111769 ACCATCTGATTGACCATTTGTCCCCCGAATACGAGATTTATTGGCTCTCACATCATGGAT 111828
|| | || | || || || || || ||| | || | | | |||||
Sbjct 380872 GCCGTTCGAGTAGCCGTTCGTGCCGGCGATGTAAGAGCCGGTCGCGCGGATGTTGTGGAT 380931
Query 111829 GTGCATCCCAATACCCCCAGCCCACTTTGAGATTTGCGCACACTCCGTAAGAGTTCCATA 111888
| || || ||||| || || ||| ||||| |||| ||| | | || || | ||
Sbjct 380932 GCTCAAACCGATACCACCGGCGGTCTTGGAGATGAGCGCGCACGTCTTGAGCGTGTCGTA 380991
Query 111889 GATACCGTTGATTGAGTCCTCCTTGTTGGCGATAAGGAAGCAACTGGACATCTGCGGTCT 111948
||| || | ||| ||||| ||||| ||| || ||||| || || | ||||||
Sbjct 380992 GATGCCTTCGATCGAGTCGTCCTTCATGGTGACCAGGAAACACGACGAAAGCTGCGGGTG 381051
Query 111949 TGGTGTACCAGCATTGAAGAGGGTTGGTGTTGCGTGAATGAACATACCTTGGGACATCTT 112008
|| || || || |||||||| || || | ||||| | || | | ||||||
Sbjct 381052 AGGCGTTCCGGCGTTGAAGAGCGTCGGCGAGGCGTGGGTAAAGTAGCGCTCGGACATGAG 381111
Query 112009 GTCGTATGTCTCCAAGACAGAATCAATGTCTTCCCCGTGGATGCCGATTGCGACCCGCAT 112068
|| ||| | || |||||| || ||||| | ||||||||||||| ||||| |||||
Sbjct 381112 GTTGTACGACTGCAAGACGCGCTCGATGTCGTGACCGTGGATGCCGACGGCGACGCGCAT 381171
Query 112069 GAACATGTACTGTGGG 112084
|| ||||| || |||
Sbjct 381172 GAGCATGTGTTGCGGG 381187
>seq69
Length=186160
Score = 158 bits (174), Expect = 2e-33
Identities = 273/394 (69%), Gaps = 2/394 (1%)
Strand=Plus/Plus
Query 9155 CCGCATCTATCAAGCCTCTTCCTCAGAGATGTTTGGTAAGGTTAAGGAGTCACCACAAAA 9214
|||| | || |||||||| |||| ||| ||| || ||||| || | || |||
Sbjct 82218 CCGCTTTTACCAAGCCTCGACCTCCGAGTTGTACGGCAAGGTCGTCGAAACCCCTCAATC 82277
Query 9215 CGAGGAGACACCCTTCTACCCACGCTCGGTCTACGGAGTCTCAAAGGTTGCGGCACATTG 9274
|||| ||||||||||||||| || ||| ||||||||| | ||| | || ||
Sbjct 82278 CGAGACGACACCCTTCTACCCTCGTTCGCCTTACGGAGTCGCCAAGTTGTACGCCTTCTG 82337
Query 9275 GCTCGTCAAAAATTACCGCGAGTCTTACGGACTGTTTGCGTGCTCCGGAATCCTCTTCAA 9334
| ||||||| || ||||||||||| |||| ||| || ||| ||| ||| | |||||
Sbjct 82338 GATCGTCAAGAACTACCGCGAGTCGTACGACATGTACGCCTGCAACGGCATCTTGTTCAA 82397
Query 9335 CCATGAATCACCGAGACGAGGT-GCAGACTTTGTGACCATGAAGATTACCGAGGGTATCA 9393
||| || || ||| | || ||| ||| |||||| || | ||||||| || | | ||
Sbjct 82398 CCACGAGTCCCCGCGTCGTGGTCGCA-CCTTTGTCACGAGGAAGATTTCCCGAGCTGTCG 82456
Query 9394 AACAAATCATGAAGGGTGAAAAGGAGTTCATTGAATTGGGTAACATAAACGCGGAGAGAG 9453
| ||| | ||| || |||| | | || | | || ||||| | || || | |
Sbjct 82457 CCGAGATCTCGCTCGGTCAACAGGACTGCCTTTACCTCGGCAACATGGAGGCCAAGCGTG 82516
Query 9454 ATTGGGGTCACGCGAAGGACTATGTTGAAGCTATGTGGCTCATGCTTCAACAAGAGGAAG 9513
||||||| |||||| ||||| || || | ||||||| | ||||| || |||||
Sbjct 82517 ATTGGGGACACGCGCGCGACTACGTCGAGGGTATGTGGATGATGCTGCAGCAAGACACCC 82576
Query 9514 CCGACGAATATGTAGTAGCAACGGGTGAGACCCA 9547
||||||| | ||| | || ||||||||||||||
Sbjct 82577 CCGACGACTTTGTCCTCGCGACGGGTGAGACCCA 82610
>seq88
Length=463073
Score = 125 bits (138), Expect = 9e-24
Identities = 165/226 (73%), Gaps = 2/226 (1%)
Strand=Plus/Minus
Query 9155 CCGCATCTATCAAGCCTCTTCCTCAGAGATGTTTGGTAAGGTTAAGGAGTCACCACAAAA 9214
|||| |||| |||||||| |||| ||| ||| || ||||| ||| | || ||
Sbjct 326097 CCGCTTCTACCAAGCCTCGACCTCGGAGTTGTACGGCAAGGTCGTCGAGACCCCTCAGTC 326038
Query 9215 CGAGGAGACACCCTTCTACCCACGCTCGGTCTACGGAGTCTCAAAGGTTGCGGCACATTG 9274
|||| ||| ||||||||||| |||||| |||||||||| | ||| | || ||
Sbjct 326037 CGAGACGACCCCCTTCTACCCTCGCTCGCCCTACGGAGTCGCCAAGCTGTACGCCTTCTG 325978
Query 9275 GCTCGTCAAAAATTACCGCGAGTCTTACGGACTGTTTGCGTGCTCCGGAATCCTCTTCAA 9334
| ||||||| || ||||||||||| ||||| ||| |||||| ||| |||||||||||
Sbjct 325977 GATCGTCAAGAACTACCGCGAGTCGTACGGCATGTACGCGTGCAACGGTATCCTCTTCAA 325918
Query 9335 CCATGAATCACCGAGACGAGG-TGCAGACTTTGTGACCATGAAGAT 9379
||| || || || | || || ||| |||||| |||| |||||
Sbjct 325917 CCACGAGTCCCCCCGCCGTGGCCGCA-CCTTTGTCACCAGAAAGAT 325873
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 628030736085600
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |