Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Microbotryum_20saponariae_20[genbank_20GCA_5F900015975.1_202016-12-
23] 161 sequences; 29,508,937 total letters
Query= NC_028093.1
Length=182309
Score E
Sequences producing significant alignments: (Bits) Value
seq69 170 2e-37
seq88 129 7e-25
seq85 129 7e-25
seq99 113 5e-20
>seq69
Length=186160
Score = 170 bits (188), Expect = 2e-37
Identities = 275/393 (70%), Gaps = 2/393 (1%)
Strand=Plus/Plus
Query 7232 CGCGTATACCAAGCCTCAACTTCGGAGATGTTTGGTAAAGTCCGAGAAACTCCACAAAAC 7291
||| | ||||||||||| || || ||| ||| || || ||| ||||| || ||| |
Sbjct 82219 CGCTTTTACCAAGCCTCGACCTCCGAGTTGTACGGCAAGGTCGTCGAAACCCCTCAATCC 82278
Query 7292 GAGGAGACACCCTTCTACCCACGCTCGGTCTACGGAGTCTCAAAGGTTGCGGCACATTGG 7351
||| ||||||||||||||| || ||| ||||||||| | ||| | || |||
Sbjct 82279 GAGACGACACCCTTCTACCCTCGTTCGCCTTACGGAGTCGCCAAGTTGTACGCCTTCTGG 82338
Query 7352 CTCGTCAAAAATTACCGCGAGTCTTACGGACTGTTTGCGTGCTCCGGAATCCTCTTCAAC 7411
||||||| || ||||||||||| |||| ||| || ||| ||| ||| | ||||||
Sbjct 82339 ATCGTCAAGAACTACCGCGAGTCGTACGACATGTACGCCTGCAACGGCATCTTGTTCAAC 82398
Query 7412 CATGAATCACCGAGACGAGGT-GCAGACTTTGTCACAAAGAAGATTACCGAGGGTATCAA 7470
|| || || ||| | || ||| ||| ||||||||| | ||||||| || | | ||
Sbjct 82399 CACGAGTCCCCGCGTCGTGGTCGCA-CCTTTGTCACGAGGAAGATTTCCCGAGCTGTCGC 82457
Query 7471 ACAAATCATGAAGGGTGAAAAGGAGTTCATTGAATTGGGTAACATAAACGCGGCGAGAGA 7530
| ||| | ||| || |||| | | || | | || ||||| | || | | ||
Sbjct 82458 CGAGATCTCGCTCGGTCAACAGGACTGCCTTTACCTCGGCAACATGGAGGCCAAGCGTGA 82517
Query 7531 TTGGGGTCACGCGAAGGACTATGTTGAAGCTATGTGGCTCATGCTTCAACAAGAGGAAGC 7590
|||||| |||||| ||||| || || | ||||||| | ||||| || ||||| |
Sbjct 82518 TTGGGGACACGCGCGCGACTACGTCGAGGGTATGTGGATGATGCTGCAGCAAGACACCCC 82577
Query 7591 CGACGAATATGTAGTAGCAACGGGTGAGACCCA 7623
|||||| | ||| | || ||||||||||||||
Sbjct 82578 CGACGACTTTGTCCTCGCGACGGGTGAGACCCA 82610
>seq88
Length=463073
Score = 129 bits (142), Expect = 7e-25
Identities = 165/225 (73%), Gaps = 2/225 (1%)
Strand=Plus/Minus
Query 7232 CGCGTATACCAAGCCTCAACTTCGGAGATGTTTGGTAAAGTCCGAGAAACTCCACAAAAC 7291
||| | ||||||||||| || |||||| ||| || || ||| || || || || |
Sbjct 326096 CGCTTCTACCAAGCCTCGACCTCGGAGTTGTACGGCAAGGTCGTCGAGACCCCTCAGTCC 326037
Query 7292 GAGGAGACACCCTTCTACCCACGCTCGGTCTACGGAGTCTCAAAGGTTGCGGCACATTGG 7351
||| ||| ||||||||||| |||||| |||||||||| | ||| | || |||
Sbjct 326036 GAGACGACCCCCTTCTACCCTCGCTCGCCCTACGGAGTCGCCAAGCTGTACGCCTTCTGG 325977
Query 7352 CTCGTCAAAAATTACCGCGAGTCTTACGGACTGTTTGCGTGCTCCGGAATCCTCTTCAAC 7411
||||||| || ||||||||||| ||||| ||| |||||| ||| ||||||||||||
Sbjct 325976 ATCGTCAAGAACTACCGCGAGTCGTACGGCATGTACGCGTGCAACGGTATCCTCTTCAAC 325917
Query 7412 CATGAATCACCGAGACGAGG-TGCAGACTTTGTCACAAAGAAGAT 7455
|| || || || | || || ||| ||||||||| | |||||
Sbjct 325916 CACGAGTCCCCCCGCCGTGGCCGCA-CCTTTGTCACCAGAAAGAT 325873
>seq85
Length=404085
Score = 129 bits (142), Expect = 7e-25
Identities = 500/781 (64%), Gaps = 15/781 (2%)
Strand=Plus/Minus
Query 104221 CCCACAGTACATGTTCATGCGCGTGGCCATCGGTATTCATGGGGAAGACATTGATTCTGT 104280
||| || ||||| |||||||||| ||| |||| || || || | ||||| || ||
Sbjct 381187 CCCGCAACACATGCTCATGCGCGTCGCCGTCGGCATCCACGGTCACGACATCGAGCGCGT 381128
Query 104281 CTTGGAGACATACGACAAGATGTCCCAAGGTATGTTCATTCACGCAACACCAACCCTCTT 104340
|||| || | ||| || |||||| | | || | ||||| | || || |||||
Sbjct 381127 CTTGCAGTCGTACAACCTCATGTCCGAGCGCTACTTTACCCACGCCTCGCCGACGCTCTT 381068
Query 104341 CAATGCTGGTACACCAAGACCCCAAATGTCCAGTTGCTTCCTTATCGCCAACAAGGAGGA 104400
||| || || || || || || | || || ||||| || ||| ||||| ||
Sbjct 381067 CAACGCCGGAACGCCTCACCCGCAGCTTTCGTCGTGTTTCCTGGTCACCATGAAGGACGA 381008
Query 104401 CTCAATCAACGGTATCTATGGAACTCTTACGGAGTGTGCGCAAATCTCAAAGTGGGCTGG 104460
||| ||| | || ||||| | || || | | ||| |||| ||||| ||| || ||
Sbjct 381007 CTCGATCGAAGGCATCTACGACACGCTCAAGACGTGCGCGCTCATCTCCAAGACCGCCGG 380948
Query 104461 GGGTATTGGGATGCACATCCATGATGTGAGAGCCAATAAATCTCGTATTCGGGGGACAAA 104520
||||| || || |||||| | | | || | ||| || || || ||
Sbjct 380947 TGGTATCGGTTTGAGCATCCACAACATCCGCGCGACCGGCTCTTACATCGCCGGCACGAA 380888
Query 104521 TGGTCAATCAGATGGTATTATTCCAATGCTTCGCGTATTTAACGCCACAGCGCGCTATGT 104580
|| | || | || || | || ||||| || || | ||| ||| |||||||| ||
Sbjct 380887 CGGCTACTCGAACGGCATCGTCCCCATGCTCCGTGTCTACAACAACACCGCGCGCTACGT 380828
Query 104581 AAATCAAGCTGG------GCGTCGAAAGGGATCTATCGCAGTCTATCTTGAGCCATGGCA 104634
| |||| ||| ||||| ||| | |||| |||| || |||||||||||
Sbjct 380827 CGACCAAGGTGGCAACAAGCGTCCC---GGAGCCTTCGCGATCTACCTCGAGCCATGGCA 380771
Query 104635 CGCGGATATCATGGAGTTCCTTGAGTTGCGTCTCAACCAAGGTGACGAGGAGG--CGCGG 104692
||| || || | |||||||| || | || ||||| || | ||||||| ||||
Sbjct 380770 CGCTGACGTCTTCGAGTTCCTGGACCTTCGCAAGAACCACGGCAAGGAGGAGGTCCGCGC 380711
Query 104693 TGCCGCGATCTCTTCTCCGCTCTCTGGATTCCAGATCTCTTCATGAAGAGAGTTGAGGAG 104752
| || |||||||||| || ||||||||||| ||||| || ||| || | || ||||
Sbjct 380710 T--CGTGATCTCTTCTTTGCGCTCTGGATTCCCGATCTGTTTATGGAGCGTGTCGAGGCC 380653
Query 104753 AGTGGCAATTGGTCTCTCTTTTGTCCAGACAAGGCACCTGGTCTCTCCGATGCCGTGGGT 104812
|| | ||| | ||||| || || | | || || || ||| ||| | | ||
Sbjct 380652 GCCAGCGAGTGGCCCCTCTTCTGCCCCGCTGAAGCCCCCGGCCTCCACGAAGTCTATGGC 380593
Query 104813 GAGGAGTTTGAAGCCCTTTACACAAAGTACGAGGAAGAAGGTCGGGCGACTGCGACGGTG 104872
|| ||||| ||| | | | || ||||| | || || || || | |||| |
Sbjct 380592 GAAGAGTTCCGCGCCTTGTTCGAGAAATACGAAAAGGAGGGCCGCGCCAAGAAGACGATC 380533
Query 104873 CCAGCTGCCGATG-TGTGGAAAGCTATTCTCAAGTCTCAAACCGAGACTGGTACACCATA 104931
|| || || | | | ||| | || ||||| | | || ||| || || | || |
Sbjct 380532 CCCGC-GCAAAAGCTTTGGTACGCGATTCTTGAAGCCCAGGTCGAAACCGGCAACCCGTT 380474
Query 104932 CATGCTTTACAAAGACGCCTGTAACCAAAAGAGTAATCAAAAGAATTTGGGTGTGATCAA 104991
|||||| ||||| |||||| ||| |||| || |||||||| | || ||||||
Sbjct 380473 CATGCTCTACAAGGACGCCGCAAACAAAAAATCGAACCAAAAGAACCTTGGCACGATCAA 380414
Query 104992 G 104992
|
Sbjct 380413 G 380413
>seq99
Length=1308205
Score = 113 bits (124), Expect = 5e-20
Identities = 207/299 (69%), Gaps = 6/299 (2%)
Strand=Plus/Minus
Query 169160 TTGAGAATGAGACCCTTGATGTGGGAACCGTCGTTATCGGCATCCGTCATGATCATGAGA 169219
|||| || |||||||||||||| || || |||| ||| ||| | ||||||||||||
Sbjct 698601 TTGATGATCAGACCCTTGATGTGCGATCCATCGTGATCCTGATCGGCCATGATCATGAGC 698542
Query 169220 CGACCATACCGAAGCTCGGAAACATCTTGATAGTCCTTACCCTGTTGAAGACCCAAGATC 169279
|| || || ||| | || || ||| | || ||||| || | |||||||||
Sbjct 698541 TTGCCGTAACGGAGCGAGTCGACGTCGGTGTAGACTTTGCCCTGCTGCAAGCCCAAGATC 698482
Query 169280 TTCTTGAGATCG-TTGAACTCTTGGTTTGATGT--GAGCTGTGTGACAGAGGCATCGCGA 169336
| ||||| ||| ||||| ||| | | || ||| | || | | || || ||
Sbjct 698481 TGCTTGA--TCGCTTGAA-TCTCGACATTATCGAGGAGGGCTTTGCCCGCCGCTTCACGC 698425
Query 169337 ACATTCTTACACTTCCCACGAAGAGGGAAGACACCGTAGTGATCACGACCAACGACGGAG 169396
|| || |||| || || | |||||||||||| |||| || ||||| |||||||
Sbjct 698424 ACGTTGAGCAACTTTCCTCGCAAAGGGAAGACACCATAGTTGTCTCGACCGACGACGGCC 698365
Query 169397 AGACCCGCGACTGCGAGAGTCTTCGCCGAGTCACCCTCGGTGACGATGAGCGTACATTT 169455
||||||| || ||||| | ||| || || || || ||||| | ||||||||| || ||
Sbjct 698364 AGACCCGACACGGCGAGCGCCTTGGCGGAATCTCCTTCGGTCAAGATGAGCGTGCACTT 698306
Score = 82.4 bits (90), Expect = 9e-11
Identities = 77/98 (79%), Gaps = 0/98 (0%)
Strand=Plus/Minus
Query 94846 TCTGGTTCCTTCTGCGCTATTTATTGGCTCAAGAAGCGAGGTCTCATGCCAGGTCTCTGC 94905
|| || |||||| | | || | ||||||||| || ||||| |||||||| || |||||
Sbjct 424776 TCAGGCTCCTTCGCCTCCATCTTTTGGCTCAAAAAACGAGGCCTCATGCCCGGCCTCTGT 424717
Query 94906 TTCTCCAACGAGCTTATCTCTCGTGACGAGGGACTCCA 94943
|||||||||||||| || || || ||||| || || ||
Sbjct 424716 TTCTCCAACGAGCTCATATCCCGCGACGAAGGTCTTCA 424679
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 583259626187640
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |