Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Microbotryum_20saponariae_20[genbank_20GCA_5F900015975.1_202016-12-
23] 161 sequences; 29,508,937 total letters
Query= NC_028110.1
Length=171045
Score E
Sequences producing significant alignments: (Bits) Value
seq85 315 8e-81
seq99 127 2e-24
>seq85
Length=404085
Score = 315 bits (348), Expect = 8e-81
Identities = 537/776 (69%), Gaps = 2/776 (0%)
Strand=Plus/Minus
Query 53193 TCATGCGCGTCGCCTTGGGTATCCACGGTGACGACTACACGCGTGTCCGTGAGACGTACG 53252
|||||||||||||| | || ||||||||| ||||| | ||| ||| || |||||
Sbjct 381173 TCATGCGCGTCGCCGTCGGCATCCACGGTCACGACATCGAGCGCGTCTTGCAGTCGTACA 381114
Query 53253 ACTTAATGAGCCAAAAGTACTTTACGCACGCCACGCCAACCCTGTTCAACGCTGGTACGA 53312
|| | ||| | | |||||||| |||||| |||| || || |||||||| || |||
Sbjct 381113 ACCTCATGTCCGAGCGCTACTTTACCCACGCCTCGCCGACGCTCTTCAACGCCGGAACGC 381054
Query 53313 ATCACCCTCAGATGTCGAGCTGCTTCCTGGTGGCGATGAAGGATGACTCGATCGACGGCA 53372
|||||| ||| | ||| || |||||||| | |||||||| ||||||||||| ||||
Sbjct 381053 CTCACCCGCAGCTTTCGTCGTGTTTCCTGGTCACCATGAAGGACGACTCGATCGAAGGCA 380994
Query 53373 TCTACGAGACGCTCAAGGAGTGTGCCCACATCTCCAAGTGGTCGGGTGGTATCGGTATCC 53432
||||||| ||||||||| ||| || | |||||||||| | |||||||||||| |
Sbjct 380993 TCTACGACACGCTCAAGACGTGCGCGCTCATCTCCAAGACCGCCGGTGGTATCGGTTTGA 380934
Query 53433 ACTGCTCGAACGTCCGTGCGAACGGCACACCAATCAAGGGGACGAACGGCGTCGCCGATG 53492
| | ||| |||| |||| |||| | ||| || ||||||||| | | | |
Sbjct 380933 GCATCCACAACATCCGCGCGACCGGCTCTTACATCGCCGGCACGAACGGCTACTCGAACG 380874
Query 53493 GAATCGTGCCTATGCTCCGCGTCTTCAACAACACGGCCCGGTACGTCAACCAGGGTGGTG 53552
| ||||| || |||||||| |||| ||||||||| || || |||||| |||| |||||
Sbjct 380873 GCATCGTCCCCATGCTCCGTGTCTACAACAACACCGCGCGCTACGTCGACCAAGGTGGCA 380814
Query 53553 GGAAGCGCAAGGGGTCGTTCGCCATCTACCTCGAGCCGTGGCACGCCGACATTATGGAGT 53612
||||| || | ||||| |||||||||||||| |||||||| ||| | | ||||
Sbjct 380813 ACAAGCGTCCCGGAGCCTTCGCGATCTACCTCGAGCCATGGCACGCTGACGTCTTCGAGT 380754
Query 53613 TTCTCGAGCTGCGTCTGAATCAGGGTGACGAAGAGATGCGCTGCCGTGACCTGTTTACAG 53672
| || || || || ||| || || | || ||| | ||| ||||| || || |
Sbjct 380753 TCCTGGACCTTCGCAAGAACCACGGCAAGGAGGAGGTCCGCGCTCGTGATCTCTTCTTTG 380694
Query 53673 CTCTGTGGATTCCGGACCTCTTCATGCAAAAGGTGGAGAAGGACGAGGAGTGGTACCTGA 53732
| || |||||||| || || || ||| | || ||| | | |||||| |||
Sbjct 380693 CGCTCTGGATTCCCGATCTGTTTATGGAGCGTGTCGAGGCCGCCAGCGAGTGGCCCCTCT 380634
Query 53733 TGTGCCCGAACGAGTGCCCCGGCCTCCAGGGTGTCTACGGTGAGGAGTTTAACGAGATGT 53792
| ||||| || |||||||||||| | ||||| || || ||||| || |||
Sbjct 380633 TCTGCCCCGCTGAAGCCCCCGGCCTCCACGAAGTCTATGGCGAAGAGTTCCGCGCCTTGT 380574
Query 53793 ATCG-GACGTACGCAGTTCAGGGCCGCTACAAGAAGAAGGTCAAGGCGCGTGAGGTATGG 53851
||| || |||| | |||||||| |||||||| | || |||| || | |||
Sbjct 380573 -TCGAGAAATACGAAAAGGAGGGCCGCGCCAAGAAGACGATCCCCGCGCAAAAGCTTTGG 380515
Query 53852 GATGCAATCCTCAAGAGCCAGGTGGAGACGGGAACGCCGTACATGTGCTACAAGGATTCG 53911
| || || || | |||||| || || || | |||| |||| ||||||||| |
Sbjct 380514 TACGCGATTCTTGAAGCCCAGGTCGAAACCGGCAACCCGTTCATGCTCTACAAGGACGCC 380455
Query 53912 GTCAACGAGAAGAGCAACCAGAAGAACATCGGCGTCATCAAATCGAGCAACTTATG 53967
| ||| | || ||||| |||||| | ||| ||||| ||| ||||| ||
Sbjct 380454 GCAAACAAAAAATCGAACCAAAAGAACCTTGGCACGATCAAGTCGTCGAACTTGTG 380399
Score = 109 bits (120), Expect = 6e-19
Identities = 147/205 (72%), Gaps = 0/205 (0%)
Strand=Plus/Minus
Query 55726 TCTCAAGGAGATTTACCGGACGGTGTGGGAGATTCCACAGAAGAGTCTGATTGACATGAG 55785
|||||||| || ||| ||| || |||||| | | || |||| | | || || ||
Sbjct 379447 TCTCAAGGCCATCTACAAGACCGTCTGGGAGCTCTCGCAAAAGACTATTATCGATCTGTC 379388
Query 55786 TGCTGATCGTGGTGCGTACATCGACCAGTCCCAGTCTCTGAACATCTTCATGGAGAATCC 55845
|| ||||| || || | |||||||||||| || || || |||||| | || || ||
Sbjct 379387 GGCCGATCGAGGCGCCTTCATCGACCAGTCGCAATCGCTCAACATCCACTTGTCGAGCCC 379328
Query 55846 TTCACTGGCCAAGTTGAGCTCGATGCACTTTTACGGGTGGAAGAAGGGACTCAAGACGGG 55905
| |||| || | | ||||||||||| ||||| |||||| ||||| ||||||||
Sbjct 379327 GACGATGGCACAGCTCACGTCGATGCACTTCTACGGCTGGAAGCGAGGACTGAAGACGGG 379268
Query 55906 TATGTACTATCTGCGGACCCGCGCC 55930
|||||||| |||| || ||||||
Sbjct 379267 CATGTACTACTTGCGCACGCGCGCC 379243
>seq99
Length=1308205
Score = 127 bits (140), Expect = 2e-24
Identities = 284/423 (67%), Gaps = 4/423 (1%)
Strand=Plus/Minus
Query 151874 ATCCGGTACCGATGCCCTCTGCACCGTTGACCAGAATCATCGGCACAATAGGGGCGTAAA 151933
|||| || || || ||||| | || ||||||| | ||| || | || ||| |||
Sbjct 699482 ATCCCGTTCCAATACCCTCCGAGCCATTGACCAAAGCCATGGGGATGATGGGGATGTACC 699423
Query 151934 ACTCCGGCTCCACCTGTTGACCGTCATCCATCACGTATTTCAAAACGGAATTGTCAGCCG 151993
| |||||| | ||||| ||||| | | ||||| | ||| | ||||| |
Sbjct 699422 AAGACGGCTCGATGCTCTGACCATCATCGTTGAGGTATTCGAGCACGCTGTCATCAGCGG 699363
Query 151994 GATCGAATATCCGTCGAGTCATAGGACTCAAACG--CGTGAAGATGTATCGGGAGCTGGC 152051
||| ||| | | || || || ||| | | || |||||||||||| || | | ||
Sbjct 699362 GATGGAAGACGCTACGCGTGAT-GGA-TGATACATTCGTGAAGATGTAACGAGCGGAAGC 699305
Query 152052 CGCATCCTTGCCACCTGCCAGCCGCGTTCCAAACTGTCCAGAGGGCTCGAGGAGGTTGAG 152111
||| || || |||||| ||| || || ||||| || || || ||||| | ||||||
Sbjct 699304 CGCGTCTTTACCACCTTGCAGACGAGTACCAAATTGACCGTTCGGGTCGAGAATGTTGAG 699245
Query 152112 GTTGTTGGCGCCCACGAAATTCTGAGCCAAATTCACAATCGTGCCCTGCAGACTCGCTTC 152171
|||||||| || ||||| | || |||| | || ||||| |||| |||| |||
Sbjct 699244 GTTGTTGGACCCGACGAACTGTTGCGCCAGGCCGATGATGGTGCCTTGCAAACTCATTTC 699185
Query 152172 ACCGTGGTGATACGCCGTCTGCTCCGCGATGTATCCCGCCAACTGCGCCACCTTCATGTC 152231
|||||| || ||||||| ||||| |||| ||| || |||| || | ||||| || ||
Sbjct 699184 ACCGTGATGGTACGCCGAGTGCTCGGCGACGTAACCGCCCAATTGTCCGACCTTGATCTC 699125
Query 152232 CGTCGTCAGGTTCTTCTTGAGACAGGCGTAAATCACCTTGCGCTGGGATGGTTTCAAACC 152291
| ||||| || ||||| || || | | |||||||| || ||||| || ||
Sbjct 699124 CTGCGTCAACTTGCGCTTGAAGCAACCGAACAAGACCTTGCGTTGACCCGGTTTGAACCC 699065
Query 152292 GTC 152294
||
Sbjct 699064 ATC 699062
Score = 86.0 bits (94), Expect = 7e-12
Identities = 87/111 (78%), Gaps = 2/111 (2%)
Strand=Plus/Minus
Query 119083 GTTGGCTAGCTTGGCACCGTATCCGTTCCGACCACCGGTCACGCGCTGCTCCTCGTCGTT 119142
|||||| | |||||| ||||| ||||||| ||||||||| || || |||||||||||
Sbjct 697309 GTTGGCCAACTTGGCTCCGTAACCGTTCCTACCACCGGTGACCTTCTCCTCCTCGTCGTC 697250
Query 119143 GTAGTTGGAGCTGGTCAAAAG-GTGCCCAAAGATGAGCTCGGGGATCCAAA 119192
|||||||| ||| | || ||| |||||||| | || ||||||||||
Sbjct 697249 ATAGTTGGAAGAGGTGAGCAGAGTG-CCAAAGATCATTTCCGGGATCCAAA 697200
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 547214898727800
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |