Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Microbotryum_20saponariae_20[genbank_20GCA_5F900015975.1_202016-12- 23] 161 sequences; 29,508,937 total letters Query= NC_028461.1 Length=127011 Score E Sequences producing significant alignments: (Bits) Value seq88 152 4e-32 >seq88 Length=463073 Score = 152 bits (168), Expect = 4e-32 Identities = 240/340 (71%), Gaps = 3/340 (1%) Strand=Plus/Plus Query 30118 GGGGTTCCAGGCGCACACGATGATGCGCCTGTCTTCTGGGTTGTTCCTGATGAGGTCCAC 30177 ||||||||| || | || |||||| | ||| || ||||| | | |||| | || Sbjct 278014 GGGGTTCCAAGCACTCAAGATGATCCTCCTATCGGTGGGGTTTTCCTTGATACTCTTGAC 278073 Query 30178 GGCGTTTTGCAGCTGATCCACCCCCATCCCCGAGTAGTCTGCCCTCAT-GTCCGTGTACT 30236 || | || |||||| ||||| ||| || || || || | |||| | |||| Sbjct 278074 AGCCTGCATCAACTGATCGACCCCTCCCCCTGA-TAATCATCCTTGGCCGTCC-TATACT 278131 Query 30237 CTGCTCCGAAATGCCTCCACTGGAACCCGTACACCGGTCCCAGGTCTCCCTCTTCCCTGT 30296 |||| ||||| ||||||||||||||||| || |||||||||| || ||||||||||| | Sbjct 278132 CTGCGCCGAAGTGCCTCCACTGGAACCCATAAACCGGTCCCAAATCCCCCTCTTCCCTAT 278191 Query 30297 GCTCGAAGCCCCTCTTGTCCAAAAAGTCTCTGGAACCGTTGGCGTCCCAGATCTTTACCC 30356 || | || || |||||||| ||| ||||| || || || | ||||| ||||| |||| Sbjct 278192 GCCCCAACCCAACCTTGTCCAGAAATTCTCTCGATCCATTCCCATCCCAAATCTTGACCC 278251 Query 30357 CCTTCTCAGAGAGCTCTTTGGAGTTTGTGGACCCTCTGACGAACCACAGCAGCTCCTCCA 30416 |||| || || | ||| || | || || |||| |||||||| || || ||||| | Sbjct 278252 CCTTGTCGGACAATAATTTCGAATCGGTCGATCCTCGAACGAACCAAAGGAGTTCCTCGA 278311 Query 30417 CGACGGCCTTCCAAAAGACCCTCTTGGTCGTGAGGAGGGG 30456 || | | ||||||| ||||||| || | ||||| Sbjct 278312 TGATACCTCGCGTAAAGACCTTCTTGGTGGTCAAAAGGGG 278351 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 406309602742812