Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Microbotryum_20saponariae_20[genbank_20GCA_5F900015975.1_202016-12-
23] 161 sequences; 29,508,937 total letters
Query= NC_028491.1
Length=98392
Score E
Sequences producing significant alignments: (Bits) Value
seq80 100 2e-16
>seq80
Length=1167844
Score = 100 bits (110), Expect = 2e-16
Identities = 155/219 (71%), Gaps = 2/219 (1%)
Strand=Plus/Minus
Query 34489 AGACGCAACACCAAATGGAGAGTGCTCTCCTTTTGAATGTTATAATCTGAAAGTGTTCGC 34548
||||| | |||||| ||||| || |||||| |||||||| ||||| | || || ||
Sbjct 789148 AGACGGAGCACCAAGTGGAGCGTCGACTCCTTCTGAATGTTGTAATCCGCGAGCGTGCGG 789089
Query 34549 TCGTCTTCAAGTTGTTTACCGGCAAATATTAAACGCTGTTGGTCCGGCGGCACTCCCTCC 34608
| || || || || || || ||||| || | ||| |||||||| || || | ||||||
Sbjct 789088 CCATCCTCGAGCTGCTTGCCCGCAAAGATGAGACGTTGTTGGTCTGGGGGAATACCCTCC 789029
Query 34609 TTGTCTGTGATCTTTTGTTTTAACGAT-AAAATTGTGTCTTCGCTCTCCACTTCCACGGT 34667
|||||| |||| || || || || | ||| ||||| | ||| || || | |||
Sbjct 789028 TTGTCTTGGATC-TTGGTCTTGACATTGTCAATCGTGTCCGAGGACTCGACCTCGAGGGT 788970
Query 34668 TATCGTTTTACCGGTTAACGTTTTCACAAAAATCTGCAT 34706
|| || || ||||| || || || || || || |||||
Sbjct 788969 GATGGTCTTGCCGGTCAAGGTCTTGACGAAGATTTGCAT 788931
Score = 100 bits (110), Expect = 2e-16
Identities = 155/219 (71%), Gaps = 2/219 (1%)
Strand=Plus/Minus
Query 34489 AGACGCAACACCAAATGGAGAGTGCTCTCCTTTTGAATGTTATAATCTGAAAGTGTTCGC 34548
||||| | |||||| ||||| || |||||| |||||||| ||||| | || || ||
Sbjct 789376 AGACGGAGCACCAAGTGGAGCGTCGACTCCTTCTGAATGTTGTAATCCGCGAGCGTGCGG 789317
Query 34549 TCGTCTTCAAGTTGTTTACCGGCAAATATTAAACGCTGTTGGTCCGGCGGCACTCCCTCC 34608
| || || || || || || ||||| || | ||| |||||||| || || | ||||||
Sbjct 789316 CCATCCTCGAGCTGCTTGCCCGCAAAGATGAGACGTTGTTGGTCTGGGGGAATACCCTCC 789257
Query 34609 TTGTCTGTGATCTTTTGTTTTAACGAT-AAAATTGTGTCTTCGCTCTCCACTTCCACGGT 34667
|||||| |||| || || || || | ||| ||||| | ||| || || | |||
Sbjct 789256 TTGTCTTGGATC-TTGGTCTTGACATTGTCAATCGTGTCCGAGGACTCGACCTCGAGGGT 789198
Query 34668 TATCGTTTTACCGGTTAACGTTTTCACAAAAATCTGCAT 34706
||||| || || || | ||| || || || || |||||
Sbjct 789197 GATCGTCTTGCCCGTAAGCGTCTTGACGAAGATTTGCAT 789159
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 314728982441513
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |