Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Microbotryum_20saponariae_20[genbank_20GCA_5F900015975.1_202016-12-
23] 161 sequences; 29,508,937 total letters
Query= NC_029132.1
Length=140122
Score E
Sequences producing significant alignments: (Bits) Value
seq88 91.5 1e-13
>seq88
Length=463073
Score = 91.5 bits (100), Expect = 1e-13
Identities = 98/130 (75%), Gaps = 0/130 (0%)
Strand=Plus/Plus
Query 6895 CCGATACTCCGCCCCAAAGTGTCTCCACTGGAACCCGTAGACCGGGCCCAAGTCGCCCTC 6954
|| |||||| || || ||||| |||||||||||||| || ||||| ||||| || |||||
Sbjct 278124 CCTATACTCTGCGCCGAAGTGCCTCCACTGGAACCCATAAACCGGTCCCAAATCCCCCTC 278183
Query 6955 CTCCCGAGATGGGAACCCCCGCTTGTCCAGAAAGTCTCGAGACCCGTGAGCGTCCCAGAT 7014
|||| | ||||| |||||||||||| |||| || || | | ||||| ||
Sbjct 278184 TTCCCTATGCCCCAACCCAACCTTGTCCAGAAATTCTCTCGATCCATTCCCATCCCAAAT 278243
Query 7015 CTTCACCCCC 7024
||| ||||||
Sbjct 278244 CTTGACCCCC 278253
Score = 91.5 bits (100), Expect = 1e-13
Identities = 98/130 (75%), Gaps = 0/130 (0%)
Strand=Plus/Minus
Query 34321 GGGGGTGAAGATCTGGGACGCTCACGGGTCTCGAGACTTTCTGGACAAGCGGGGGTTCCC 34380
|||||| ||||| ||||| | | || || |||| |||||||||||| |||||
Sbjct 278253 GGGGGTCAAGATTTGGGATGGGAATGGATCGAGAGAATTTCTGGACAAGGTTGGGTTGGG 278194
Query 34381 ATCTCGGGAGGAGGGCGACTTGGGCCCGGTCTACGGGTTCCAGTGGAGACACTTTGGGGC 34440
| |||| ||||| || ||||| ||||| || |||||||||||||| ||||| || ||
Sbjct 278193 GCATAGGGAAGAGGGGGATTTGGGACCGGTTTATGGGTTCCAGTGGAGGCACTTCGGCGC 278134
Query 34441 GGAGTATCGG 34450
|||||| ||
Sbjct 278133 AGAGTATAGG 278124
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 448261497871920
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |