Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Microbotryum_20saponariae_20[genbank_20GCA_5F900015975.1_202016-12-
23] 161 sequences; 29,508,937 total letters
Query= NC_029997.1
Length=105667
Score E
Sequences producing significant alignments: (Bits) Value
seq80 111 1e-19
seq105 96.9 2e-15
>seq80
Length=1167844
Score = 111 bits (122), Expect = 1e-19
Identities = 145/198 (73%), Gaps = 2/198 (1%)
Strand=Plus/Plus
Query 23611 ATGCAGATTTTCGTTAAAACCCTCACGGGAAAAACGATCACTCTCGAAGTTGACTCCACG 23670
||||| || ||||| || || || ||||| || |||||||| ||||| || || ||| ||
Sbjct 789159 ATGCAAATCTTCGTCAAGACGCTTACGGGCAAGACGATCACCCTCGAGGTCGAGTCCTCG 789218
Query 23671 GACACTGTTGA-AATATTAAAACAAAAAATTGCTGACAAAGAAGGTGTACCGCCAGATCA 23729
||||| |||| ||| | || || || | | ||||| || ||| | || ||||| ||
Sbjct 789219 GACACGATTGACAATGTCAAGACCAAGA-TCCAAGACAAGGAGGGTATTCCCCCAGACCA 789277
Query 23730 ACAGCGTTTAATATTTGCCGGCAAACAACTGGAAGACGAACGCACTTTAGGCGATTACAA 23789
||| ||| | || ||||| ||||| || || || || | ||||| | | ||||||||
Sbjct 789278 ACAACGTCTCATCTTTGCGGGCAAGCAGCTCGAGGATGGCCGCACGCTCGCGGATTACAA 789337
Query 23790 CATACAAAAAGAGTCCAC 23807
||| || || ||||| ||
Sbjct 789338 CATTCAGAAGGAGTCGAC 789355
Score = 107 bits (118), Expect = 1e-18
Identities = 144/198 (73%), Gaps = 2/198 (1%)
Strand=Plus/Plus
Query 23611 ATGCAGATTTTCGTTAAAACCCTCACGGGAAAAACGATCACTCTCGAAGTTGACTCCACG 23670
||||| || ||||| || || || ||||| || |||||||| ||||| || || ||| ||
Sbjct 789387 ATGCAAATCTTCGTCAAGACGCTTACGGGCAAGACGATCACCCTCGAGGTCGAGTCCTCG 789446
Query 23671 GACACTGTTGA-AATATTAAAACAAAAAATTGCTGACAAAGAAGGTGTACCGCCAGATCA 23729
||||| | || ||| | || || || | || ||||| ||||| | || ||||| ||
Sbjct 789447 GACACGATCGACAATGTCAAGACCAAGA-TTCAAGACAAGGAAGGCATTCCCCCAGACCA 789505
Query 23730 ACAGCGTTTAATATTTGCCGGCAAACAACTGGAAGACGAACGCACTTTAGGCGATTACAA 23789
||||| || || || || ||||| || || || || | ||||| | | ||||||||
Sbjct 789506 GCAGCGATTGATCTTCGCGGGCAAGCAGCTCGAGGATGGCCGCACGCTCGCGGATTACAA 789565
Query 23790 CATACAAAAAGAGTCCAC 23807
||| || || ||||| ||
Sbjct 789566 CATTCAGAAGGAGTCGAC 789583
Score = 102 bits (112), Expect = 6e-17
Identities = 143/198 (72%), Gaps = 2/198 (1%)
Strand=Plus/Plus
Query 23611 ATGCAGATTTTCGTTAAAACCCTCACGGGAAAAACGATCACTCTCGAAGTTGACTCCACG 23670
||||| || ||||| || ||| | || || || || ||||| ||||| || || ||| ||
Sbjct 788931 ATGCAAATCTTCGTCAAGACCTTGACCGGCAAGACCATCACCCTCGAGGTCGAGTCCTCG 788990
Query 23671 GACACTGTTGA-AATATTAAAACAAAAAATTGCTGACAAAGAAGGTGTACCGCCAGATCA 23729
||||| |||| ||| | || || || | | ||||| || ||| | || ||||| ||
Sbjct 788991 GACACGATTGACAATGTCAAGACCAAGA-TCCAAGACAAGGAGGGTATTCCCCCAGACCA 789049
Query 23730 ACAGCGTTTAATATTTGCCGGCAAACAACTGGAAGACGAACGCACTTTAGGCGATTACAA 23789
||| ||| | || ||||| ||||| || || || || | ||||| | | ||||||||
Sbjct 789050 ACAACGTCTCATCTTTGCGGGCAAGCAGCTCGAGGATGGCCGCACGCTCGCGGATTACAA 789109
Query 23790 CATACAAAAAGAGTCCAC 23807
||| || || ||||| ||
Sbjct 789110 CATTCAGAAGGAGTCGAC 789127
Score = 87.8 bits (96), Expect = 1e-12
Identities = 141/203 (69%), Gaps = 0/203 (0%)
Strand=Plus/Plus
Query 23605 CTTAAAATGCAGATTTTCGTTAAAACCCTCACGGGAAAAACGATCACTCTCGAAGTTGAC 23664
||| | ||||| || || || || ||| | || || || |||||||| || || |||||
Sbjct 546771 CTTCAGATGCAAATCTTTGTCAAGACCTTAACCGGCAAGACGATCACGCTTGAGGTTGAG 546830
Query 23665 TCCACGGACACTGTTGAAATATTAAAACAAAAAATTGCTGACAAAGAAGGTGTACCGCCA 23724
||| ||||||| | || | |||| || ||| || || || || | || |||
Sbjct 546831 TCCTCGGACACGATCGACAACGTAAAGGCTAAGATTCAGGATAAGGAGGGCATTCCCCCA 546890
Query 23725 GATCAACAGCGTTTAATATTTGCCGGCAAACAACTGGAAGACGAACGCACTTTAGGCGAT 23784
|| ||||| ||| | || || || ||||| || || || || | || || | | ||||
Sbjct 546891 GACCAACAACGTCTCATCTTCGCGGGCAAGCAGCTCGAGGATGGCCGTACGCTCGCCGAT 546950
Query 23785 TACAACATACAAAAAGAGTCCAC 23807
|||||||| || || ||||| ||
Sbjct 546951 TACAACATCCAGAAGGAGTCGAC 546973
>seq105
Length=561522
Score = 96.9 bits (106), Expect = 2e-15
Identities = 141/197 (72%), Gaps = 2/197 (1%)
Strand=Plus/Minus
Query 23612 TGCAGATTTTCGTTAAAACCCTCACGGGAAAAACGATCACTCTCGAAGTTGACTCCACGG 23671
|||| || ||||| || ||||||||||| || || ||||| ||||| || || || | |
Sbjct 280202 TGCAAATCTTCGTCAAGACCCTCACGGGCAAGACCATCACCCTCGAGGTCGAGTCGTCCG 280143
Query 23672 ACACTGTTGA-AATATTAAAACAAAAAATTGCTGACAAAGAAGGTGTACCGCCAGATCAA 23730
|||| | || || | || || || | | ||||| ||||| | || || || ||
Sbjct 280142 ACACGATCGACAACGTCAAGACCAAGA-TCCAGGACAAGGAAGGCATCCCCCCCGACCAG 280084
Query 23731 CAGCGTTTAATATTTGCCGGCAAACAACTGGAAGACGAACGCACTTTAGGCGATTACAAC 23790
|| ||| | || ||||||||||| || || || || | ||||| | | |||||||||
Sbjct 280083 CAACGTCTCATCTTTGCCGGCAAGCAGCTCGAGGATGGCCGCACGCTCGCGGATTACAAC 280024
Query 23791 ATACAAAAAGAGTCCAC 23807
|| ||||| ||||| ||
Sbjct 280023 ATCCAAAAGGAGTCGAC 280007
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 338008936761788
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |