Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Microbotryum_20saponariae_20[genbank_20GCA_5F900015975.1_202016-12- 23] 161 sequences; 29,508,937 total letters Query= NC_030842.1 Length=115510 Score E Sequences producing significant alignments: (Bits) Value seq88 154 1e-32 >seq88 Length=463073 Score = 154 bits (170), Expect = 1e-32 Identities = 242/342 (71%), Gaps = 7/342 (2%) Strand=Plus/Plus Query 27384 GGGGTTCCAGGCGCACACGATGATGCGCCTGTCTTCTGGGTTGTTCCTGATGAGGTCCAC 27443 ||||||||| || | || |||||| | ||| || ||||| | | |||| | || Sbjct 278014 GGGGTTCCAAGCACTCAAGATGATCCTCCTATCGGTGGGGTTTTCCTTGATACTCTTGAC 278073 Query 27444 GGCGTTTTGCAGCTGATCCACCCCCATCCCCGAGTAGTCTACCCTCATGTCCGTG---TA 27500 || | || |||||| ||||| ||| || || || | ||| || |||| || Sbjct 278074 AGCCTGCATCAACTGATCGACCCCTCCCCCTGA-TAATC-ATCCT--TGGCCGTCCTATA 278129 Query 27501 CTCTGCTCCGAAATGCCTCCATTGGAACCCGTACACCGGTCCCAGGTCTCCCTCTTCCCT 27560 |||||| ||||| |||||||| |||||||| || |||||||||| || ||||||||||| Sbjct 278130 CTCTGCGCCGAAGTGCCTCCACTGGAACCCATAAACCGGTCCCAAATCCCCCTCTTCCCT 278189 Query 27561 GTGCTCGAAGCCCCTCTTGTCCAAAAAGTCTCTGGAACCGTTGGCGTCCCAGATCTTTAC 27620 ||| | || || |||||||| ||| ||||| || || || | ||||| ||||| || Sbjct 278190 ATGCCCCAACCCAACCTTGTCCAGAAATTCTCTCGATCCATTCCCATCCCAAATCTTGAC 278249 Query 27621 CCCCTTCTCGGAGAGCTCTTTGGAGTTTGTGGACCCTCTGACGAACCACAGCAGCTCCTC 27680 |||||| ||||| | ||| || | || || |||| |||||||| || || ||||| Sbjct 278250 CCCCTTGTCGGACAATAATTTCGAATCGGTCGATCCTCGAACGAACCAAAGGAGTTCCTC 278309 Query 27681 CACGACGGCCTTCCAAAAGACCCTCTTGGTCGTGAGGAGGGG 27722 | || | | ||||||| ||||||| || | ||||| Sbjct 278310 GATGATACCTCGCGTAAAGACCTTCTTGGTGGTCAAAAGGGG 278351 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 369506474957591