Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Microbotryum_20saponariae_20[genbank_20GCA_5F900015975.1_202016-12- 23] 161 sequences; 29,508,937 total letters Query= NC_032001.1 Length=327147 Score E Sequences producing significant alignments: (Bits) Value seq80 187 5e-42 seq105 185 2e-41 seq56 174 3e-38 seq78 95.1 3e-14 seq99 87.8 4e-12 >seq80 Length=1167844 Score = 187 bits (206), Expect = 5e-42 Identities = 178/228 (78%), Gaps = 0/228 (0%) Strand=Plus/Minus Query 282872 ACCACCACGCAGGCGAAGTACCAGATGTAACGTGCTTTCTTTTTGGATGTTGTAGTCAGC 282931 ||||||||| || || || |||| || | ||| || || || |||||||| || || Sbjct 789386 ACCACCACGGAGACGGAGCACCAAGTGGAGCGTCGACTCCTTCTGAATGTTGTAATCCGC 789327 Query 282932 AAGCGTGCGGCCATCCTCTAGTTGTTTCCCGGCAAAGATCAAACGTTGTTGGTCACCCGG 282991 ||||||||||||||||| || || || || |||||||| | |||||||||||| || Sbjct 789326 GAGCGTGCGGCCATCCTCGAGCTGCTTGCCCGCAAAGATGAGACGTTGTTGGTCTGGGGG 789267 Query 282992 AATACCCTCCTTGTCTTGGATCTTTGCTTTTACGGTATCGATAGTGTCCGAAGCTTCGAC 283051 |||||||||||||||||||||||| | || || | || || |||||||| | ||||| Sbjct 789266 AATACCCTCCTTGTCTTGGATCTTGGTCTTGACATTGTCAATCGTGTCCGAGGACTCGAC 789207 Query 283052 TTCGAGAGTGATCGTCTTACCCGTCAAAGTCTTAACGAATATCTGCAT 283099 ||||| ||||||||||| ||||| | ||||| ||||| || ||||| Sbjct 789206 CTCGAGGGTGATCGTCTTGCCCGTAAGCGTCTTGACGAAGATTTGCAT 789159 Score = 181 bits (200), Expect = 2e-40 Identities = 177/228 (78%), Gaps = 0/228 (0%) Strand=Plus/Minus Query 282872 ACCACCACGCAGGCGAAGTACCAGATGTAACGTGCTTTCTTTTTGGATGTTGTAGTCAGC 282931 |||||| || || || || |||| || | ||| || || || |||||||| || || Sbjct 789158 ACCACCGCGGAGACGGAGCACCAAGTGGAGCGTCGACTCCTTCTGAATGTTGTAATCCGC 789099 Query 282932 AAGCGTGCGGCCATCCTCTAGTTGTTTCCCGGCAAAGATCAAACGTTGTTGGTCACCCGG 282991 ||||||||||||||||| || || || || |||||||| | |||||||||||| || Sbjct 789098 GAGCGTGCGGCCATCCTCGAGCTGCTTGCCCGCAAAGATGAGACGTTGTTGGTCTGGGGG 789039 Query 282992 AATACCCTCCTTGTCTTGGATCTTTGCTTTTACGGTATCGATAGTGTCCGAAGCTTCGAC 283051 |||||||||||||||||||||||| | || || | || || |||||||| | ||||| Sbjct 789038 AATACCCTCCTTGTCTTGGATCTTGGTCTTGACATTGTCAATCGTGTCCGAGGACTCGAC 788979 Query 283052 TTCGAGAGTGATCGTCTTACCCGTCAAAGTCTTAACGAATATCTGCAT 283099 ||||| ||||| ||||| || ||||| ||||| ||||| || ||||| Sbjct 788978 CTCGAGGGTGATGGTCTTGCCGGTCAAGGTCTTGACGAAGATTTGCAT 788931 Score = 176 bits (194), Expect = 9e-39 Identities = 175/227 (77%), Gaps = 0/227 (0%) Strand=Plus/Minus Query 282873 CCACCACGCAGGCGAAGTACCAGATGTAACGTGCTTTCTTTTTGGATGTTGTAGTCAGCA 282932 || || || || || || |||| || | ||| || || |||||||||||||| || Sbjct 547231 CCGCCTCGGAGACGGAGCACCAAGTGCAGCGTCGACTCCTTCTGGATGTTGTAGTCGGCG 547172 Query 282933 AGCGTGCGGCCATCCTCTAGTTGTTTCCCGGCAAAGATCAAACGTTGTTGGTCACCCGGA 282992 ||||| ||||||||||| || || || || || ||||| | |||||||||||| ||| Sbjct 547171 AGCGTACGGCCATCCTCGAGCTGCTTGCCCGCGAAGATGAGACGTTGTTGGTCTGGGGGA 547112 Query 282993 ATACCCTCCTTGTCTTGGATCTTTGCTTTTACGGTATCGATAGTGTCCGAAGCTTCGACT 283052 || ||||||||||| || ||||| || || ||| | ||||| |||||||| | || || Sbjct 547111 ATGCCCTCCTTGTCCTGAATCTTGGCCTTGACGTTGTCGATCGTGTCCGAGGACTCAACC 547052 Query 283053 TCGAGAGTGATCGTCTTACCCGTCAAAGTCTTAACGAATATCTGCAT 283099 ||||| ||||||||||| || ||||| ||||| ||||| || ||||| Sbjct 547051 TCGAGCGTGATCGTCTTGCCTGTCAAGGTCTTGACGAAGATTTGCAT 547005 Score = 168 bits (186), Expect = 1e-36 Identities = 174/228 (76%), Gaps = 0/228 (0%) Strand=Plus/Minus Query 282872 ACCACCACGCAGGCGAAGTACCAGATGTAACGTGCTTTCTTTTTGGATGTTGTAGTCAGC 282931 |||||| || ||||| || |||| || | ||| || || ||||||||||| || || Sbjct 547004 ACCACCTCGGAGGCGGAGCACCAAGTGCAGCGTCGACTCCTTCTGGATGTTGTAATCGGC 546945 Query 282932 AAGCGTGCGGCCATCCTCTAGTTGTTTCCCGGCAAAGATCAAACGTTGTTGGTCACCCGG 282991 ||||| ||||||||||| || || || || || ||||| | |||||||||||| || Sbjct 546944 GAGCGTACGGCCATCCTCGAGCTGCTTGCCCGCGAAGATGAGACGTTGTTGGTCTGGGGG 546885 Query 282992 AATACCCTCCTTGTCTTGGATCTTTGCTTTTACGGTATCGATAGTGTCCGAAGCTTCGAC 283051 ||| |||||||| || || ||||| || |||||| | ||||| |||||||| | || || Sbjct 546884 AATGCCCTCCTTATCCTGAATCTTAGCCTTTACGTTGTCGATCGTGTCCGAGGACTCAAC 546825 Query 283052 TTCGAGAGTGATCGTCTTACCCGTCAAAGTCTTAACGAATATCTGCAT 283099 || || ||||||||||| || || || ||||| || || || ||||| Sbjct 546824 CTCAAGCGTGATCGTCTTGCCGGTTAAGGTCTTGACAAAGATTTGCAT 546777 Score = 168 bits (186), Expect = 1e-36 Identities = 174/228 (76%), Gaps = 0/228 (0%) Strand=Plus/Minus Query 282872 ACCACCACGCAGGCGAAGTACCAGATGTAACGTGCTTTCTTTTTGGATGTTGTAGTCAGC 282931 ||||||||| || || || |||| || | ||| || || || |||||||| || || Sbjct 789614 ACCACCACGGAGACGCAGCACCAAGTGGAGCGTCGACTCCTTCTGAATGTTGTAATCCGC 789555 Query 282932 AAGCGTGCGGCCATCCTCTAGTTGTTTCCCGGCAAAGATCAAACGTTGTTGGTCACCCGG 282991 ||||||||||||||||| || || || || || |||||||| || || ||||| || Sbjct 789554 GAGCGTGCGGCCATCCTCGAGCTGCTTGCCCGCGAAGATCAATCGCTGCTGGTCTGGGGG 789495 Query 282992 AATACCCTCCTTGTCTTGGATCTTTGCTTTTACGGTATCGATAGTGTCCGAAGCTTCGAC 283051 ||| || ||||||||||| ||||| | || || | ||||| |||||||| | ||||| Sbjct 789494 AATGCCTTCCTTGTCTTGAATCTTGGTCTTGACATTGTCGATCGTGTCCGAGGACTCGAC 789435 Query 283052 TTCGAGAGTGATCGTCTTACCCGTCAAAGTCTTAACGAATATCTGCAT 283099 ||||| ||||||||||| ||||| | ||||| ||||| || ||||| Sbjct 789434 CTCGAGGGTGATCGTCTTGCCCGTAAGCGTCTTGACGAAGATTTGCAT 789387 >seq105 Length=561522 Score = 185 bits (204), Expect = 2e-41 Identities = 177/227 (78%), Gaps = 0/227 (0%) Strand=Plus/Plus Query 282872 ACCACCACGCAGGCGAAGTACCAGATGTAACGTGCTTTCTTTTTGGATGTTGTAGTCAGC 282931 ||||||||||||||| || |||| || | ||| || |||||||||||||| || || Sbjct 279976 ACCACCACGCAGGCGGAGCACCAAGTGGAGCGTCGACTCCTTTTGGATGTTGTAATCCGC 280035 Query 282932 AAGCGTGCGGCCATCCTCTAGTTGTTTCCCGGCAAAGATCAAACGTTGTTGGTCACCCGG 282991 ||||||||||||||||| || || || ||||||||||| | |||||| ||||| || Sbjct 280036 GAGCGTGCGGCCATCCTCGAGCTGCTTGCCGGCAAAGATGAGACGTTGCTGGTCGGGGGG 280095 Query 282992 AATACCCTCCTTGTCTTGGATCTTTGCTTTTACGGTATCGATAGTGTCCGAAGCTTCGAC 283051 || || |||||||| |||||||| | || ||| | ||||| ||||| || | ||||| Sbjct 280096 GATGCCTTCCTTGTCCTGGATCTTGGTCTTGACGTTGTCGATCGTGTCGGACGACTCGAC 280155 Query 283052 TTCGAGAGTGATCGTCTTACCCGTCAAAGTCTTAACGAATATCTGCA 283098 ||||| ||||| ||||| ||||| | ||||| ||||| || |||| Sbjct 280156 CTCGAGGGTGATGGTCTTGCCCGTGAGGGTCTTGACGAAGATTTGCA 280202 >seq56 Length=195491 Score = 174 bits (192), Expect = 3e-38 Identities = 174/226 (77%), Gaps = 0/226 (0%) Strand=Plus/Minus Query 282872 ACCACCACGCAGGCGAAGTACCAGATGTAACGTGCTTTCTTTTTGGATGTTGTAGTCAGC 282931 |||||| || ||||| || |||| || | || || ||||||||||||||||| || Sbjct 107529 ACCACCTCGGAGGCGGAGCACCAAGTGGAGGGTCGACTCCTTTTGGATGTTGTAGTCGGC 107470 Query 282932 AAGCGTGCGGCCATCCTCTAGTTGTTTCCCGGCAAAGATCAAACGTTGTTGGTCACCCGG 282991 | |||||||||||||| || || || ||||| ||||| | |||||| ||||| || Sbjct 107469 CAAGGTGCGGCCATCCTCGAGCTGCTTGCCGGCGAAGATGAGACGTTGCTGGTCTGGGGG 107410 Query 282992 AATACCCTCCTTGTCTTGGATCTTTGCTTTTACGGTATCGATAGTGTCCGAAGCTTCGAC 283051 || || ||||||||||||||||| | || ||| | ||||| ||||| || | ||||| Sbjct 107409 GATGCCTTCCTTGTCTTGGATCTTGGTCTTGACGTTGTCGATCGTGTCGGACGACTCGAC 107350 Query 283052 TTCGAGAGTGATCGTCTTACCCGTCAAAGTCTTAACGAATATCTGC 283097 ||||| ||||||||||| ||||| | |||||| ||||| || ||| Sbjct 107349 CTCGAGGGTGATCGTCTTGCCCGTAAGAGTCTTGACGAAGATTTGC 107304 >seq78 Length=484104 Score = 95.1 bits (104), Expect = 3e-14 Identities = 82/102 (80%), Gaps = 0/102 (0%) Strand=Plus/Plus Query 316183 TAACGCCATTGGATGTACTGATTGGGCGTCATGTCAAGATGATCCTCGATGTGGTGGAAA 316242 |||||||| ||||||||||| | | |||| | ||||| || ||||||||||||||||| Sbjct 275595 TAACGCCACTGGATGTACTGCATCGCCGTCTTCTCAAGGTGCTCCTCGATGTGGTGGAAC 275654 Query 316243 GCGTGCTGTGCCACGTAAGCAAGACGCATATTTGGATGCTTC 316284 ||||| || || ||||| || | ||||| || || |||||| Sbjct 275655 GCGTGTTGGGCGACGTACGCGACACGCAAGTTGGGGTGCTTC 275696 >seq99 Length=1308205 Score = 87.8 bits (96), Expect = 4e-12 Identities = 356/552 (64%), Gaps = 12/552 (2%) Strand=Plus/Minus Query 273516 TTGAAACCTTTGTACCACGGCTTCATGGCTACCATAGGTTCACCCTTCATCAGTCGCTCC 273575 ||||| || |||||| || | ||| | | |||| || ||| ||||| ||| Sbjct 699591 TTGAATCCACGGTACCAAGGGTGCATCGGTTCCATCTCCTCGCCCCTCATCTTGCGCCTT 699532 Query 273576 ACATTACCAATAATATCTTTAGGGTTGTAACTCGGAACGTTCGTAGACCAACCGGTGCCA 273635 | || | | |||||| | ||||||||| | || || || | ||| || || ||| Sbjct 699531 AAGTTGGCCACAATATCCGTGGGGTTGTAATTGGGCACCGACGAACTCCATCCCGTTCCA 699472 Query 273636 ATACCGGAAGAACCATTCACCAGAATACTCGGGATAATTGGGACATAATATTCGGGCTCA 273695 ||||| || ||||| |||| | | ||||| || |||| || | ||||| Sbjct 699471 ATACCCTCCGAGCCATTGACCAAAGCCATGGGGATGATGGGGATGTACCAAGACGGCTCG 699412 Query 273696 ATTTTATCACCATCGTCGTAAAGGTACTTCAACAAAGCA-TCATCCGTATCAACGAAAAC 273754 || | | |||||| |||| ||||| ||| | | || ||||| | | ||| || Sbjct 699411 ATGCTCTGACCATCATCGTTGAGGTA-TTCGAGCACGCTGTCATCAGCGGGATGGAAGAC 699353 Query 273755 CTTTCGCGTCT--GAGGATTCAGTTTCGTGAAAATGTACCTGGCACTCGCATGGTCCTTG 273812 | ||||| || ||| || |||||||| ||||| | || || ||| || Sbjct 699352 GCTACGCGTGATGGATGATACA--TTCGTGAAGATGTAACGAGCGGAAGCCGCGTCTTTA 699295 Query 273813 CCACCTTGCAGCCTCGAACCAAACTGACCCT-CGGGCAGTAGCCAGTTTATGTTGTTGCT 273871 ||||||||||| | | |||||| ||||| | |||| | || ||| | ||||||| Sbjct 699294 CCACCTTGCAGACGAGTACCAAATTGACCGTTCGGGTCG-AGAATGTTGAGGTTGTTGGA 699236 Query 273872 ACCGACGTAATCCTGAGCCATATTCACGATAGTCCCCTGAAGGGATACCTCGCCGTGGTG 273931 |||||| | | || |||| | ||| || || || | | || ||||| || Sbjct 699235 CCCGACGAACTGTTGCGCCAGGCCGATGATGGTGCCTTGCAAACTCATTTCACCGTGATG 699176 Query 273932 ATAGGCGCTGTGTTCGGCGATATAACCACTGAACTGAGCAACCTTCACATCGCTCGTCAA 273991 || || ||| ||||||| ||||| | || || | ||||| | || |||||| Sbjct 699175 GTACGCCGAGTGCTCGGCGACGTAACCGCCCAATTGTCCGACCTTGATCTCCTGCGTCAA 699116 Query 273992 GTTTCGCTTGAATG--CGGAATACAACACCTTCCGCTGCGAGGGCTTGAACCCATCAACG 274049 || |||||||| | ||| ||| ||||| || || || ||||||||||||| | Sbjct 699115 CTTGCGCTTGAAGCAACCGAA--CAAGACCTTGCGTTGACCCGGTTTGAACCCATCAATG 699058 Query 274050 ACCGATGGAATA 274061 || || || ||| Sbjct 699057 ACAGAGGGGATA 699046 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1046737040773294