Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Microbotryum_20saponariae_20[genbank_20GCA_5F900015975.1_202016-12-
23] 161 sequences; 29,508,937 total letters
Query= NC_033775.1
Length=376207
Score E
Sequences producing significant alignments: (Bits) Value
seq105 163 7e-35
seq56 163 7e-35
seq80 154 4e-32
>seq105
Length=561522
Score = 163 bits (180), Expect = 7e-35
Identities = 160/205 (78%), Gaps = 1/205 (0%)
Strand=Plus/Minus
Query 177924 CAAATTTTCGTGAAAACTCTCACAGGAAAAACGATCACCCTCGAGGTGGAAAGCTCAGAC 177983
||||| ||||| || || ||||| || || || |||||||||||||| || || |||
Sbjct 280200 CAAATCTTCGTCAAGACCCTCACGGGCAAGACCATCACCCTCGAGGTCGAGTCGTCCGAC 280141
Query 177984 ACCATCGAGAACGTCAAACAAAAGATTCAGGACAAAGAAGGAATCCCTCCGGACCAGCAA 178043
|| ||||| |||||||| ||||| |||||||| ||||| ||||| || |||||||||
Sbjct 280140 ACGATCGACAACGTCAAGACCAAGATCCAGGACAAGGAAGGCATCCCCCCCGACCAGCAA 280081
Query 178044 CGACTTATCTTCGCCGGAAAACAGCTCGAAGATGGAAGGACTCTTGCCGATTATAACGTC 178103
|| || ||||| ||||| || |||||||| ||||| | || || || ||||| ||| ||
Sbjct 280080 CGTCTCATCTTTGCCGGCAAGCAGCTCGAGGATGGCCGCACGCTCGCGGATTACAACATC 280021
Query 178104 CAAAAAGAATCAACACTGCATCTTG 178128
||||| || || || || || ||||
Sbjct 280020 CAAAAGGAGTCGACGCTCCA-CTTG 279997
>seq56
Length=195491
Score = 163 bits (180), Expect = 7e-35
Identities = 160/205 (78%), Gaps = 1/205 (0%)
Strand=Plus/Plus
Query 177924 CAAATTTTCGTGAAAACTCTCACAGGAAAAACGATCACCCTCGAGGTGGAAAGCTCAGAC 177983
||||| ||||| || ||||| || || || ||||||||||||||||| || || |||
Sbjct 107305 CAAATCTTCGTCAAGACTCTTACGGGCAAGACGATCACCCTCGAGGTCGAGTCGTCCGAC 107364
Query 177984 ACCATCGAGAACGTCAAACAAAAGATTCAGGACAAAGAAGGAATCCCTCCGGACCAGCAA 178043
|| ||||| |||||||| ||||| || ||||| ||||| ||||| || |||||||||
Sbjct 107365 ACGATCGACAACGTCAAGACCAAGATCCAAGACAAGGAAGGCATCCCCCCAGACCAGCAA 107424
Query 178044 CGACTTATCTTCGCCGGAAAACAGCTCGAAGATGGAAGGACTCTTGCCGATTATAACGTC 178103
|| || ||||||||||| || |||||||| ||||| | || | ||||| || ||| ||
Sbjct 107425 CGTCTCATCTTCGCCGGCAAGCAGCTCGAGGATGGCCGCACCTTGGCCGACTACAACATC 107484
Query 178104 CAAAAAGAATCAACACTGCATCTTG 178128
||||| || || || || || ||||
Sbjct 107485 CAAAAGGAGTCGACCCTCCA-CTTG 107508
>seq80
Length=1167844
Score = 154 bits (170), Expect = 4e-32
Identities = 158/205 (77%), Gaps = 1/205 (0%)
Strand=Plus/Plus
Query 177924 CAAATTTTCGTGAAAACTCTCACAGGAAAAACGATCACCCTCGAGGTGGAAAGCTCAGAC 177983
||||| ||||| || || | ||||| || |||||||| |||||||| || ||| |||
Sbjct 547008 CAAATCTTCGTCAAGACCTTGACAGGCAAGACGATCACGCTCGAGGTTGAGTCCTCGGAC 547067
Query 177984 ACCATCGAGAACGTCAAACAAAAGATTCAGGACAAAGAAGGAATCCCTCCGGACCAGCAA 178043
|| ||||| |||||||| |||||||||||||| || || || || || ||||| |||
Sbjct 547068 ACGATCGACAACGTCAAGGCCAAGATTCAGGACAAGGAGGGCATTCCCCCAGACCAACAA 547127
Query 178044 CGACTTATCTTCGCCGGAAAACAGCTCGAAGATGGAAGGACTCTTGCCGATTATAACGTC 178103
|| || |||||||| || || |||||||| ||||| | || || ||||| || ||| ||
Sbjct 547128 CGTCTCATCTTCGCGGGCAAGCAGCTCGAGGATGGCCGTACGCTCGCCGACTACAACATC 547187
Query 178104 CAAAAAGAATCAACACTGCATCTTG 178128
|| || || || || ||||| ||||
Sbjct 547188 CAGAAGGAGTCGACGCTGCA-CTTG 547211
Score = 145 bits (160), Expect = 2e-29
Identities = 156/205 (76%), Gaps = 1/205 (0%)
Strand=Plus/Plus
Query 177924 CAAATTTTCGTGAAAACTCTCACAGGAAAAACGATCACCCTCGAGGTGGAAAGCTCAGAC 177983
||||| ||||| || || || || || || ||||||||||||||||| || ||| |||
Sbjct 789390 CAAATCTTCGTCAAGACGCTTACGGGCAAGACGATCACCCTCGAGGTCGAGTCCTCGGAC 789449
Query 177984 ACCATCGAGAACGTCAAACAAAAGATTCAGGACAAAGAAGGAATCCCTCCGGACCAGCAA 178043
|| ||||| || ||||| |||||||| ||||| ||||| || || || ||||||||
Sbjct 789450 ACGATCGACAATGTCAAGACCAAGATTCAAGACAAGGAAGGCATTCCCCCAGACCAGCAG 789509
Query 178044 CGACTTATCTTCGCCGGAAAACAGCTCGAAGATGGAAGGACTCTTGCCGATTATAACGTC 178103
||| | |||||||| || || |||||||| ||||| | || || || ||||| ||| |
Sbjct 789510 CGATTGATCTTCGCGGGCAAGCAGCTCGAGGATGGCCGCACGCTCGCGGATTACAACATT 789569
Query 178104 CAAAAAGAATCAACACTGCATCTTG 178128
|| || || || || || || ||||
Sbjct 789570 CAGAAGGAGTCGACGCTCCA-CTTG 789593
Score = 136 bits (150), Expect = 1e-26
Identities = 154/205 (75%), Gaps = 1/205 (0%)
Strand=Plus/Plus
Query 177924 CAAATTTTCGTGAAAACTCTCACAGGAAAAACGATCACCCTCGAGGTGGAAAGCTCAGAC 177983
||||| || || || || | || || || |||||||| || ||||| || ||| |||
Sbjct 546780 CAAATCTTTGTCAAGACCTTAACCGGCAAGACGATCACGCTTGAGGTTGAGTCCTCGGAC 546839
Query 177984 ACCATCGAGAACGTCAAACAAAAGATTCAGGACAAAGAAGGAATCCCTCCGGACCAGCAA 178043
|| ||||| ||||| || ||||||||||| || || || || || || ||||| |||
Sbjct 546840 ACGATCGACAACGTAAAGGCTAAGATTCAGGATAAGGAGGGCATTCCCCCAGACCAACAA 546899
Query 178044 CGACTTATCTTCGCCGGAAAACAGCTCGAAGATGGAAGGACTCTTGCCGATTATAACGTC 178103
|| || |||||||| || || |||||||| ||||| | || || |||||||| ||| ||
Sbjct 546900 CGTCTCATCTTCGCGGGCAAGCAGCTCGAGGATGGCCGTACGCTCGCCGATTACAACATC 546959
Query 178104 CAAAAAGAATCAACACTGCATCTTG 178128
|| || || || || ||||| ||||
Sbjct 546960 CAGAAGGAGTCGACGCTGCA-CTTG 546983
Score = 127 bits (140), Expect = 5e-24
Identities = 152/205 (74%), Gaps = 1/205 (0%)
Strand=Plus/Plus
Query 177924 CAAATTTTCGTGAAAACTCTCACAGGAAAAACGATCACCCTCGAGGTGGAAAGCTCAGAC 177983
||||| ||||| || || || || || || ||||||||||||||||| || ||| |||
Sbjct 789162 CAAATCTTCGTCAAGACGCTTACGGGCAAGACGATCACCCTCGAGGTCGAGTCCTCGGAC 789221
Query 177984 ACCATCGAGAACGTCAAACAAAAGATTCAGGACAAAGAAGGAATCCCTCCGGACCAGCAA 178043
|| || || || ||||| ||||| || ||||| || || || || || ||||| |||
Sbjct 789222 ACGATTGACAATGTCAAGACCAAGATCCAAGACAAGGAGGGTATTCCCCCAGACCAACAA 789281
Query 178044 CGACTTATCTTCGCCGGAAAACAGCTCGAAGATGGAAGGACTCTTGCCGATTATAACGTC 178103
|| || ||||| || || || |||||||| ||||| | || || || ||||| ||| |
Sbjct 789282 CGTCTCATCTTTGCGGGCAAGCAGCTCGAGGATGGCCGCACGCTCGCGGATTACAACATT 789341
Query 178104 CAAAAAGAATCAACACTGCATCTTG 178128
|| || || || || || || ||||
Sbjct 789342 CAGAAGGAGTCGACGCTCCA-CTTG 789365
Score = 118 bits (130), Expect = 3e-21
Identities = 150/205 (73%), Gaps = 1/205 (0%)
Strand=Plus/Plus
Query 177924 CAAATTTTCGTGAAAACTCTCACAGGAAAAACGATCACCCTCGAGGTGGAAAGCTCAGAC 177983
||||| ||||| || || | || || || || |||||||||||||| || ||| |||
Sbjct 788934 CAAATCTTCGTCAAGACCTTGACCGGCAAGACCATCACCCTCGAGGTCGAGTCCTCGGAC 788993
Query 177984 ACCATCGAGAACGTCAAACAAAAGATTCAGGACAAAGAAGGAATCCCTCCGGACCAGCAA 178043
|| || || || ||||| ||||| || ||||| || || || || || ||||| |||
Sbjct 788994 ACGATTGACAATGTCAAGACCAAGATCCAAGACAAGGAGGGTATTCCCCCAGACCAACAA 789053
Query 178044 CGACTTATCTTCGCCGGAAAACAGCTCGAAGATGGAAGGACTCTTGCCGATTATAACGTC 178103
|| || ||||| || || || |||||||| ||||| | || || || ||||| ||| |
Sbjct 789054 CGTCTCATCTTTGCGGGCAAGCAGCTCGAGGATGGCCGCACGCTCGCGGATTACAACATT 789113
Query 178104 CAAAAAGAATCAACACTGCATCTTG 178128
|| || || || || || || ||||
Sbjct 789114 CAGAAGGAGTCGACGCTCCA-CTTG 789137
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 1203728716928234
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |