Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Microbotryum_20saponariae_20[genbank_20GCA_5F900015975.1_202016-12-
23] 161 sequences; 29,508,937 total letters
Query= NC_033780.1
Length=144510
Score E
Sequences producing significant alignments: (Bits) Value
seq80 152 5e-32
seq56 118 1e-21
seq105 114 1e-20
>seq80
Length=1167844
Score = 152 bits (168), Expect = 5e-32
Identities = 172/228 (75%), Gaps = 2/228 (1%)
Strand=Plus/Minus
Query 41636 CCGCCGCGTAGACGTAACACCAGATGCAGCGTGCTCTCCTTCTGAATGTTATAGTCGGAG 41695
||||| || ||||| | ||||| |||||||| ||||||||| ||||| ||||||| |
Sbjct 547231 CCGCCTCGGAGACGGAGCACCAAGTGCAGCGTCGACTCCTTCTGGATGTTGTAGTCGGCG 547172
Query 41696 AGGGTGCGCTCGTCGTCGAGCTGCTTGCCGGCGAATATCAGGCGCTGTTGGTCCGCGGGA 41755
|| || || | || |||||||||||||| ||||| || || || |||||||| | ||||
Sbjct 547171 AGCGTACGGCCATCCTCGAGCTGCTTGCCCGCGAAGATGAGACGTTGTTGGTCTGGGGGA 547112
Query 41756 ACGCTCTCCTTGTCCATGATTTTTTGCTTCAACGACGAC-ACAGTGTCGCTCGACTCCAC 41814
| || |||||||||| ||| | || || | ||| | | | ||||| ||||| ||
Sbjct 547111 ATGCCCTCCTTGTCC-TGAATCTTGGCCTTGACGTTGTCGATCGTGTCCGAGGACTCAAC 547053
Query 41815 CTCCACCGTTATCGTTTTACCCGTCAGCGTCTTTACGAAAATCTGCAT 41862
||| | ||| ||||| || || |||| ||||| ||||| || |||||
Sbjct 547052 CTCGAGCGTGATCGTCTTGCCTGTCAAGGTCTTGACGAAGATTTGCAT 547005
Score = 132 bits (146), Expect = 4e-26
Identities = 170/230 (74%), Gaps = 6/230 (3%)
Strand=Plus/Minus
Query 41636 CCGCCGCGTAGACGTAACACCAGATGCAGCGTGCTCTCCTTCTGAATGTTATAGTCGGAG 41695
|| || || ||||| | ||||| || ||||| ||||||||||||||| || || | |
Sbjct 789613 CCACCACGGAGACGCAGCACCAAGTGGAGCGTCGACTCCTTCTGAATGTTGTAATCCGCG 789554
Query 41696 AGGGTGCGCTCGTCGTCGAGCTGCTTGCCGGCGAATATCAGGCGCTGTTGGTCCGCGGGA 41755
|| ||||| | || |||||||||||||| ||||| |||| ||||| ||||| | ||||
Sbjct 789553 AGCGTGCGGCCATCCTCGAGCTGCTTGCCCGCGAAGATCAATCGCTGCTGGTCTGGGGGA 789494
Query 41756 ACGCTCTCCTTGTCCATGATTTTTTG-CTT--CAACGACGACACAGTGTCGCTCGACTCC 41812
| || ||||||| | ||| | || | ||| || | || | ||||| |||||
Sbjct 789493 ATGCCTTCCTTGT-CTTGAATCTTGGTCTTGACATTGTCG--ATCGTGTCCGAGGACTCG 789437
Query 41813 ACCTCCACCGTTATCGTTTTACCCGTCAGCGTCTTTACGAAAATCTGCAT 41862
||||| | || ||||| || ||||| |||||||| ||||| || |||||
Sbjct 789436 ACCTCGAGGGTGATCGTCTTGCCCGTAAGCGTCTTGACGAAGATTTGCAT 789387
Score = 125 bits (138), Expect = 7e-24
Identities = 166/228 (73%), Gaps = 2/228 (1%)
Strand=Plus/Minus
Query 41636 CCGCCGCGTAGACGTAACACCAGATGCAGCGTGCTCTCCTTCTGAATGTTATAGTCGGAG 41695
|| || || || || | ||||| |||||||| ||||||||| ||||| || |||| |
Sbjct 547003 CCACCTCGGAGGCGGAGCACCAAGTGCAGCGTCGACTCCTTCTGGATGTTGTAATCGGCG 546944
Query 41696 AGGGTGCGCTCGTCGTCGAGCTGCTTGCCGGCGAATATCAGGCGCTGTTGGTCCGCGGGA 41755
|| || || | || |||||||||||||| ||||| || || || |||||||| | ||||
Sbjct 546943 AGCGTACGGCCATCCTCGAGCTGCTTGCCCGCGAAGATGAGACGTTGTTGGTCTGGGGGA 546884
Query 41756 ACGCTCTCCTTGTCCATGATTTTTTGCTTCAACGACGAC-ACAGTGTCGCTCGACTCCAC 41814
| || |||||| ||| ||| | || || | ||| | | | ||||| ||||| ||
Sbjct 546883 ATGCCCTCCTTATCC-TGAATCTTAGCCTTTACGTTGTCGATCGTGTCCGAGGACTCAAC 546825
Query 41815 CTCCACCGTTATCGTTTTACCCGTCAGCGTCTTTACGAAAATCTGCAT 41862
||| | ||| ||||| || || || | ||||| || || || |||||
Sbjct 546824 CTCAAGCGTGATCGTCTTGCCGGTTAAGGTCTTGACAAAGATTTGCAT 546777
Score = 125 bits (138), Expect = 7e-24
Identities = 166/228 (73%), Gaps = 2/228 (1%)
Strand=Plus/Minus
Query 41636 CCGCCGCGTAGACGTAACACCAGATGCAGCGTGCTCTCCTTCTGAATGTTATAGTCGGAG 41695
|| || || ||||| | ||||| || ||||| ||||||||||||||| || || | |
Sbjct 789385 CCACCACGGAGACGGAGCACCAAGTGGAGCGTCGACTCCTTCTGAATGTTGTAATCCGCG 789326
Query 41696 AGGGTGCGCTCGTCGTCGAGCTGCTTGCCGGCGAATATCAGGCGCTGTTGGTCCGCGGGA 41755
|| ||||| | || |||||||||||||| || || || || || |||||||| | ||||
Sbjct 789325 AGCGTGCGGCCATCCTCGAGCTGCTTGCCCGCAAAGATGAGACGTTGTTGGTCTGGGGGA 789266
Query 41756 ACGCTCTCCTTGTCCATGATTTTTTGCTTCAACGACGAC-ACAGTGTCGCTCGACTCCAC 41814
| | ||||||||| ||| || ||| || | | | ||||| ||||| ||
Sbjct 789265 ATACCCTCCTTGTCTTGGATCTTGGTCTT-GACATTGTCAATCGTGTCCGAGGACTCGAC 789207
Query 41815 CTCCACCGTTATCGTTTTACCCGTCAGCGTCTTTACGAAAATCTGCAT 41862
||| | || ||||| || ||||| |||||||| ||||| || |||||
Sbjct 789206 CTCGAGGGTGATCGTCTTGCCCGTAAGCGTCTTGACGAAGATTTGCAT 789159
Score = 116 bits (128), Expect = 3e-21
Identities = 164/228 (72%), Gaps = 2/228 (1%)
Strand=Plus/Minus
Query 41636 CCGCCGCGTAGACGTAACACCAGATGCAGCGTGCTCTCCTTCTGAATGTTATAGTCGGAG 41695
|| ||||| ||||| | ||||| || ||||| ||||||||||||||| || || | |
Sbjct 789157 CCACCGCGGAGACGGAGCACCAAGTGGAGCGTCGACTCCTTCTGAATGTTGTAATCCGCG 789098
Query 41696 AGGGTGCGCTCGTCGTCGAGCTGCTTGCCGGCGAATATCAGGCGCTGTTGGTCCGCGGGA 41755
|| ||||| | || |||||||||||||| || || || || || |||||||| | ||||
Sbjct 789097 AGCGTGCGGCCATCCTCGAGCTGCTTGCCCGCAAAGATGAGACGTTGTTGGTCTGGGGGA 789038
Query 41756 ACGCTCTCCTTGTCCATGATTTTTTGCTTCAACGACGAC-ACAGTGTCGCTCGACTCCAC 41814
| | ||||||||| ||| || ||| || | | | ||||| ||||| ||
Sbjct 789037 ATACCCTCCTTGTCTTGGATCTTGGTCTT-GACATTGTCAATCGTGTCCGAGGACTCGAC 788979
Query 41815 CTCCACCGTTATCGTTTTACCCGTCAGCGTCTTTACGAAAATCTGCAT 41862
||| | || || || || || |||| ||||| ||||| || |||||
Sbjct 788978 CTCGAGGGTGATGGTCTTGCCGGTCAAGGTCTTGACGAAGATTTGCAT 788931
>seq56
Length=195491
Score = 118 bits (130), Expect = 1e-21
Identities = 165/229 (72%), Gaps = 2/229 (1%)
Strand=Plus/Minus
Query 41636 CCGCCGCGTAGACGTAACACCAGATGCAGCGTGCTCTCCTTCTGAATGTTATAGTCGGAG 41695
|| || || || || | ||||| || || || |||||| || ||||| |||||||
Sbjct 107528 CCACCTCGGAGGCGGAGCACCAAGTGGAGGGTCGACTCCTTTTGGATGTTGTAGTCGGCC 107469
Query 41696 AGGGTGCGCTCGTCGTCGAGCTGCTTGCCGGCGAATATCAGGCGCTGTTGGTCCGCGGGA 41755
| |||||| | || |||||||||||||||||||| || || || || ||||| | |||
Sbjct 107468 AAGGTGCGGCCATCCTCGAGCTGCTTGCCGGCGAAGATGAGACGTTGCTGGTCTGGGGGG 107409
Query 41756 ACGCTCTCCTTGTCCATGATTTTTTGCTTCAACGACGAC-ACAGTGTCGCTCGACTCCAC 41814
| || |||||||| ||| || ||| ||| | | | |||||| |||||| ||
Sbjct 107408 ATGCCTTCCTTGTCTTGGATCTTGGTCTT-GACGTTGTCGATCGTGTCGGACGACTCGAC 107350
Query 41815 CTCCACCGTTATCGTTTTACCCGTCAGCGTCTTTACGAAAATCTGCATG 41863
||| | || ||||| || ||||| || ||||| ||||| || ||| ||
Sbjct 107349 CTCGAGGGTGATCGTCTTGCCCGTAAGAGTCTTGACGAAGATTTGCCTG 107301
>seq105
Length=561522
Score = 114 bits (126), Expect = 1e-20
Identities = 163/227 (72%), Gaps = 2/227 (1%)
Strand=Plus/Plus
Query 41636 CCGCCGCGTAGACGTAACACCAGATGCAGCGTGCTCTCCTTCTGAATGTTATAGTCGGAG 41695
|| || || || || | ||||| || ||||| |||||| || ||||| || || | |
Sbjct 279977 CCACCACGCAGGCGGAGCACCAAGTGGAGCGTCGACTCCTTTTGGATGTTGTAATCCGCG 280036
Query 41696 AGGGTGCGCTCGTCGTCGAGCTGCTTGCCGGCGAATATCAGGCGCTGTTGGTCCGCGGGA 41755
|| ||||| | || ||||||||||||||||| || || || || || ||||| | |||
Sbjct 280037 AGCGTGCGGCCATCCTCGAGCTGCTTGCCGGCAAAGATGAGACGTTGCTGGTCGGGGGGG 280096
Query 41756 ACGCTCTCCTTGTCCATGATTTTTTGCTTCAACGACGAC-ACAGTGTCGCTCGACTCCAC 41814
| || ||||||||| ||| || ||| ||| | | | |||||| |||||| ||
Sbjct 280097 ATGCCTTCCTTGTCCTGGATCTTGGTCTT-GACGTTGTCGATCGTGTCGGACGACTCGAC 280155
Query 41815 CTCCACCGTTATCGTTTTACCCGTCAGCGTCTTTACGAAAATCTGCA 41861
||| | || || || || ||||| || ||||| ||||| || ||||
Sbjct 280156 CTCGAGGGTGATGGTCTTGCCCGTGAGGGTCTTGACGAAGATTTGCA 280202
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 462303069613200
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |