Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Microbotryum_20violaceum_20[genbank_20GCA_5F900008855.1_202016-12- 23] 123 sequences; 24,532,870 total letters Query= NC_001973.1 Length=161046 Score E Sequences producing significant alignments: (Bits) Value seq36 176 5e-39 seq21 141 1e-28 seq79 136 4e-27 seq31 136 4e-27 >seq36 Length=1210608 Score = 176 bits (194), Expect = 5e-39 Identities = 173/223 (78%), Gaps = 3/223 (1%) Strand=Plus/Minus Query 116647 GTACAAAAAGGCCGAGGCGTCGTTCTGGACCGTCGAGGAGGTGGACCTGTCCAAGGACAC 116706 |||||| ||||||||||| || |||||||||| ||| ||| ||||| |||||||||||| Sbjct 56486 GTACAAGAAGGCCGAGGCATCCTTCTGGACCGCCGAAGAGATGGACTTGTCCAAGGACAT 56427 Query 116707 GAGCGACTGGGAGCGCTTGAACGA---CAACGAGCGCCATTTCATCAAGCACGTGCTGGC 116763 | ||||||||| | | | | | |||||||| | |||||| |||||| || || Sbjct 56426 GCACGACTGGGACAACAAGCTCAAGCCCGACGAGCGCTACTTCATCTCGCACGTCCTCGC 56367 Query 116764 CTTTTTCGCCGCCAGCGACGGCATCGTCAACGAGAATCTGGTCGAGCGTTTCGCTCAGGA 116823 ||| |||||||| ||||||||||||||||||||| |||||||||| ||| | || Sbjct 56366 CTTCTTCGCCGCGTCCGACGGCATCGTCAACGAGAACTTGGTCGAGCGGTTCTCCGGTGA 56307 Query 116824 GGTGCAGGTGGCCGAGGCGCGGTGCTTCTACGGCTTTCAGATC 116866 ||| ||| ||||| || || ||||||||||| || || ||| Sbjct 56306 GGTCCAGTCCGCCGAAGCTCGATGCTTCTACGGTTTCCAAATC 56264 Score = 93.3 bits (102), Expect = 4e-14 Identities = 83/104 (80%), Gaps = 0/104 (0%) Strand=Plus/Minus Query 117086 TTCGCCGCCATATTTTGGCTCAAGAAACGCGGCCTCATGCCCGGCCTGACTTTCAGCAAC 117145 ||||| |||| || ||||||||||| |||||| | |||||||| |||| ||| |||| Sbjct 55763 TTCGCTTCCATCTTCTGGCTCAAGAAGCGCGGCTTGATGCCCGGATTGACCTTCTCCAAC 55704 Query 117146 GAGCTCATCTCCAGGGACGAGGGTCTGCATTGCGACTTTGCCTG 117189 |||||||| || | |||||||| || || |||||||||||| Sbjct 55703 GAGCTCATTTCGCGTGACGAGGGCCTCCACACCGACTTTGCCTG 55660 >seq21 Length=1587489 Score = 141 bits (156), Expect = 1e-28 Identities = 172/234 (74%), Gaps = 3/234 (1%) Strand=Plus/Minus Query 116636 ATGTGGCGCATGTACAAAAAGGCCGAGGCGTCGTTCTGGACCGTCGAGGAGGTGGACCTG 116695 || ||| |||||||||| | ||| ||||||| || ||| ||| ||| ||| | ||||| Sbjct 347070 ATCTGGGCCATGTACAAACAAGCCCAGGCGTCCTTTTGGTCCGCCGAAGAGATCGACCTC 347011 Query 116696 TCCAAGGACACGAGCGACTGGGAGCGCTTG---AACGACAACGAGCGCCATTTCATCAAG 116752 ||| ||| ||||||| | | | | ||| || |||| ||| | |||||| Sbjct 347010 GGCAACGACCTCCACGACTGGCACCACAAGCTCAACAACGACGAACGCTACTTCATCGCC 346951 Query 116753 CACGTGCTGGCCTTTTTCGCCGCCAGCGACGGCATCGTCAACGAGAATCTGGTCGAGCGT 116812 || || || |||||||||||||| |||||| |||| || |||||| |||||||| | Sbjct 346950 CATGTACTCGCCTTTTTCGCCGCTTCGGACGGCGTCGTGAATGAGAATTTGGTCGAGAGG 346891 Query 116813 TTCGCTCAGGAGGTGCAGGTGGCCGAGGCGCGGTGCTTCTACGGCTTTCAGATC 116866 ||| | ||||||||| | || |||||| ||||||| || |||||||||||| Sbjct 346890 TTCTCGAGTGAGGTGCAGTTCGCAGAGGCGAGGTGCTTTTATGGCTTTCAGATC 346837 Score = 141 bits (156), Expect = 1e-28 Identities = 169/227 (74%), Gaps = 2/227 (1%) Strand=Plus/Minus Query 40691 TGCAAATATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAAGCCACCG 40750 ||||||| ||||| || || || |||||||| ||||||||| |||| ||||| || ||| Sbjct 1354364 TGCAAATCTTCGTCAAGACCCTTACGGGCAAGACCATCACCCTCGAGGTCGAGTCCTCCG 1354305 Query 40751 ACAGCGTGCA-AACGCTCAAGGAAAAAATTCTCGACAAAGAGGGCATCCCCGCGGACCAG 40809 ||| | | |||| |||||| || || | ||||| || || || ||| | |||||| Sbjct 1354304 ACACGATCGACAACG-TCAAGGCCAAGATCCAAGACAAGGAAGGAATTCCCCCAGACCAG 1354246 Query 40810 CAACGACTCATCTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTACAAC 40869 ||||| ||||||| ||| ||||| ||||| || || | || || ||| ||||||||| Sbjct 1354245 CAACGTCTCATCTTCGCCGGCAAGCAGCTCGAGGATGGCCGTACTCTCGCGGACTACAAC 1354186 Query 40870 ATCCAGAAGGAGGCCACGCTGCATCTAGTGTTGCGCTTGAGGGGCGG 40916 ||||| |||||| | || || || | ||| | ||| || | || || Sbjct 1354185 ATCCAAAAGGAGTCGACCCTCCACTTGGTGCTCCGCCTGCGCGGTGG 1354139 Score = 107 bits (118), Expect = 2e-18 Identities = 98/124 (79%), Gaps = 0/124 (0%) Strand=Plus/Minus Query 117085 TTTCGCCGCCATATTTTGGCTCAAGAAACGCGGCCTCATGCCCGGCCTGACTTTCAGCAA 117144 ||||||| |||| || |||||||||||||| ||||||||||||||||| |||| ||| Sbjct 346377 TTTCGCCTCCATCTTCTGGCTCAAGAAACGAGGCCTCATGCCCGGCCTCTGTTTCTCCAA 346318 Query 117145 CGAGCTCATCTCCAGGGACGAGGGTCTGCATTGCGACTTTGCCTGTTTGCTGTTCAAGCA 117204 ||||||||||||| | ||||| ||||| ||| || || ||| | |||||| || Sbjct 346317 CGAGCTCATCTCCCGCGACGAAGGTCTCCATACTGAATTCGCCGTCCTTTTGTTCAGTCA 346258 Query 117205 TTTG 117208 |||| Sbjct 346257 TTTG 346254 >seq79 Length=1842920 Score = 136 bits (150), Expect = 4e-27 Identities = 154/204 (75%), Gaps = 2/204 (1%) Strand=Plus/Plus Query 40690 ATGCAAATATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAAGCCACC 40749 |||||||| || || || || || || || ||||| ||||| |||| ||||| | | Sbjct 451915 ATGCAAATCTTTGTCAAGACCCTGACCGGTAAAACGATCACGCTCGAGGTCGAGTCGTCG 451974 Query 40750 GACAGCGTGCA-AACGCTCAAGGAAAAAATTCTCGACAAAGAGGGCATCCCCGCGGACCA 40808 |||| | | |||| |||||| || |||| ||||| |||||||||||| | ||||| Sbjct 451975 GACACGATCGACAACG-TCAAGGCCAAGATTCAGGACAAGGAGGGCATCCCCCCAGACCA 452033 Query 40809 GCAACGACTCATCTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTACAA 40868 ||| ||| | |||| ||| ||||| ||||| || || | || || ||| ||||||||| Sbjct 452034 GCAGCGATTGATCTTCGCTGGCAAGCAGCTCGAGGATGGCCGTACGCTCGCCGACTACAA 452093 Query 40869 CATCCAGAAGGAGGCCACGCTGCA 40892 ||||||||||||| | ||| |||| Sbjct 452094 CATCCAGAAGGAGTCGACGTTGCA 452117 Score = 136 bits (150), Expect = 4e-27 Identities = 154/204 (75%), Gaps = 2/204 (1%) Strand=Plus/Plus Query 40690 ATGCAAATATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAAGCCACC 40749 |||||||| || || || || || || || ||||| ||||| |||| ||||| | | Sbjct 452598 ATGCAAATCTTTGTCAAGACCCTGACCGGTAAAACGATCACGCTCGAGGTCGAGTCGTCG 452657 Query 40750 GACAGCGTGCA-AACGCTCAAGGAAAAAATTCTCGACAAAGAGGGCATCCCCGCGGACCA 40808 |||| | | |||| |||||| || |||| ||||| |||||||||||| | ||||| Sbjct 452658 GACACGATCGACAACG-TCAAGGCCAAGATTCAGGACAAGGAGGGCATCCCCCCAGACCA 452716 Query 40809 GCAACGACTCATCTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTACAA 40868 ||| ||| | |||| ||| ||||| ||||| || || | || || ||| ||||||||| Sbjct 452717 GCAGCGATTGATCTTCGCTGGCAAGCAGCTCGAGGATGGCCGTACGCTCGCCGACTACAA 452776 Query 40869 CATCCAGAAGGAGGCCACGCTGCA 40892 ||||||||||||| | ||| |||| Sbjct 452777 CATCCAGAAGGAGTCGACGTTGCA 452800 Score = 136 bits (150), Expect = 4e-27 Identities = 154/204 (75%), Gaps = 2/204 (1%) Strand=Plus/Plus Query 40690 ATGCAAATATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAAGCCACC 40749 |||||||| ||||| || || || || ||||| || ||||| |||| ||||| | | Sbjct 678663 ATGCAAATCTTCGTCAAGACCCTGACTGGCAAGACGATCACGCTCGAGGTCGAGTCGTCG 678722 Query 40750 GACAGCGTGCA-AACGCTCAAGGAAAAAATTCTCGACAAAGAGGGCATCCCCGCGGACCA 40808 |||| | | |||| |||||| || || | ||||| ||||||||||| | ||||| Sbjct 678723 GACACGATCGACAACG-TCAAGGCCAAGATCCAGGACAAGGAGGGCATCCCTCCAGACCA 678781 Query 40809 GCAACGACTCATCTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTACAA 40868 ||| ||| | |||| ||| ||||| ||||| || || | ||||| ||| ||||||||| Sbjct 678782 GCAGCGATTGATCTTCGCTGGCAAGCAGCTCGAGGATGGCCGCACGCTCGCCGACTACAA 678841 Query 40869 CATCCAGAAGGAGGCCACGCTGCA 40892 ||||||||||||| | ||| |||| Sbjct 678842 CATCCAGAAGGAGTCGACGTTGCA 678865 Score = 132 bits (146), Expect = 5e-26 Identities = 154/204 (75%), Gaps = 3/204 (1%) Strand=Plus/Plus Query 40690 ATGCAAATATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAAGCCACC 40749 |||||||| ||||| || || || || |||||||| ||||| |||| || || | | Sbjct 452826 ATGCAAATCTTCGTCAAGACCCTGACCGGCAAAACGATCACGCTCGAGGTTGAGTCGTCG 452885 Query 40750 GACAGCGTGCA-AACGCTCAAGGAAAAAATTCTCGACAAAGAGGGCATCCCCGCGGACCA 40808 |||| | | |||| |||||| || |||| ||||| |||||||||||| | ||||| Sbjct 452886 GACACGATCGACAACG-TCAAGGCCAAGATTCAGGACAAGGAGGGCATCCCC-CAGACCA 452943 Query 40809 GCAACGACTCATCTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTACAA 40868 ||| ||| | |||| ||| ||||| ||||| || || | || || ||| |||||| || Sbjct 452944 GCAGCGATTGATCTTCGCTGGCAAGCAGCTCGAGGATGGCCGTACGCTCGCCGACTATAA 453003 Query 40869 CATCCAGAAGGAGGCCACGCTGCA 40892 ||||||||||||| | ||||| || Sbjct 453004 CATCCAGAAGGAGTCGACGCTCCA 453027 Score = 131 bits (144), Expect = 2e-25 Identities = 153/204 (75%), Gaps = 2/204 (1%) Strand=Plus/Plus Query 40690 ATGCAAATATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAAGCCACC 40749 |||||||| ||||| || || || || |||||||| ||||| |||| || || | | Sbjct 451687 ATGCAAATCTTCGTCAAGACCCTGACCGGCAAAACGATCACGCTCGAGGTTGAGTCGTCG 451746 Query 40750 GACAGCGTGCA-AACGCTCAAGGAAAAAATTCTCGACAAAGAGGGCATCCCCGCGGACCA 40808 |||| | | |||| | |||| || || | ||||| |||||||||||| | ||||| Sbjct 451747 GACACGATCGACAACG-TGAAGGCCAAGATCCAGGACAAGGAGGGCATCCCCCCAGACCA 451805 Query 40809 GCAACGACTCATCTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTACAA 40868 ||| ||| | |||| ||| ||||| ||||| || || | || || ||| ||||||||| Sbjct 451806 GCAGCGATTGATCTTCGCTGGCAAGCAGCTCGAGGATGGCCGTACGCTCGCCGACTACAA 451865 Query 40869 CATCCAGAAGGAGGCCACGCTGCA 40892 ||||||||||||| | ||| |||| Sbjct 451866 CATCCAGAAGGAGTCGACGTTGCA 451889 Score = 131 bits (144), Expect = 2e-25 Identities = 153/204 (75%), Gaps = 2/204 (1%) Strand=Plus/Plus Query 40690 ATGCAAATATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAAGCCACC 40749 |||||||| ||||| || || || || |||||||| ||||| |||| || || | | Sbjct 452143 ATGCAAATCTTCGTCAAGACCCTGACCGGCAAAACGATCACGCTCGAGGTTGAGTCGTCG 452202 Query 40750 GACAGCGTGCA-AACGCTCAAGGAAAAAATTCTCGACAAAGAGGGCATCCCCGCGGACCA 40808 |||| | | |||| | |||| || || | ||||| |||||||||||| | ||||| Sbjct 452203 GACACGATCGACAACG-TGAAGGCCAAGATCCAGGACAAGGAGGGCATCCCCCCAGACCA 452261 Query 40809 GCAACGACTCATCTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTACAA 40868 ||| ||| | |||| ||| ||||| ||||| || || | || || ||| ||||||||| Sbjct 452262 GCAGCGATTGATCTTCGCTGGCAAGCAGCTCGAGGATGGCCGTACGCTCGCCGACTACAA 452321 Query 40869 CATCCAGAAGGAGGCCACGCTGCA 40892 ||||||||||||| | ||| |||| Sbjct 452322 CATCCAGAAGGAGTCGACGTTGCA 452345 Score = 131 bits (144), Expect = 2e-25 Identities = 153/204 (75%), Gaps = 2/204 (1%) Strand=Plus/Plus Query 40690 ATGCAAATATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAAGCCACC 40749 |||||||| ||||| || || || || |||||||| ||||| |||| ||||| | | Sbjct 678891 ATGCAAATCTTCGTCAAGACCCTGACCGGCAAAACGATCACGCTCGAGGTCGAGTCGTCG 678950 Query 40750 GACAGCGTGCA-AACGCTCAAGGAAAAAATTCTCGACAAAGAGGGCATCCCCGCGGACCA 40808 |||| | | |||| |||||| || || | ||||| |||||||| || | ||||| Sbjct 678951 GACACGATCGACAACG-TCAAGGCCAAGATCCAGGACAAGGAGGGCATTCCTCCAGACCA 679009 Query 40809 GCAACGACTCATCTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTACAA 40868 ||| ||| | |||| ||| ||||| ||||| || || | || || ||| ||||||||| Sbjct 679010 GCAGCGATTGATCTTCGCTGGCAAGCAGCTCGAGGATGGCCGTACGCTCGCCGACTACAA 679069 Query 40869 CATCCAGAAGGAGGCCACGCTGCA 40892 ||||||||||||| | ||| |||| Sbjct 679070 CATCCAGAAGGAGTCGACGTTGCA 679093 Score = 131 bits (144), Expect = 2e-25 Identities = 153/204 (75%), Gaps = 2/204 (1%) Strand=Plus/Plus Query 40690 ATGCAAATATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAAGCCACC 40749 |||||||| || || || || || || |||||||| ||||| |||| ||||| | | Sbjct 679119 ATGCAAATCTTTGTCAAGACCCTGACCGGCAAAACGATCACGCTCGAGGTCGAGTCGTCG 679178 Query 40750 GACAGCGTGCA-AACGCTCAAGGAAAAAATTCTCGACAAAGAGGGCATCCCCGCGGACCA 40808 |||| | | |||| |||||| || |||| ||||| ||||||||||| | ||||| Sbjct 679179 GACACGATCGACAACG-TCAAGGCCAAGATTCAGGACAAGGAGGGCATCCCTCCAGACCA 679237 Query 40809 GCAACGACTCATCTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTACAA 40868 ||| ||| | |||| ||| ||||| ||||| || || | || || ||| ||||||||| Sbjct 679238 GCAGCGATTGATCTTCGCTGGCAAGCAGCTCGAGGATGGCCGTACGCTCGCCGACTACAA 679297 Query 40869 CATCCAGAAGGAGGCCACGCTGCA 40892 |||||||||||| | ||| |||| Sbjct 679298 TATCCAGAAGGAGTCGACGTTGCA 679321 Score = 127 bits (140), Expect = 2e-24 Identities = 153/204 (75%), Gaps = 3/204 (1%) Strand=Plus/Plus Query 40690 ATGCAAATATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAAGCCACC 40749 |||||||| ||||| || || || || |||||||| ||||| |||| || || | | Sbjct 452371 ATGCAAATCTTCGTCAAGACCCTGACCGGCAAAACGATCACGCTCGAGGTTGAGTCGTCG 452430 Query 40750 GACAGCGTGCA-AACGCTCAAGGAAAAAATTCTCGACAAAGAGGGCATCCCCGCGGACCA 40808 |||| | | |||| | |||| || || | ||||| |||||||||||| | ||||| Sbjct 452431 GACACGATCGACAACG-TGAAGGCCAAGATCCAGGACAAGGAGGGCATCCCC-CAGACCA 452488 Query 40809 GCAACGACTCATCTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTACAA 40868 ||| ||| | |||| ||| ||||| ||||| || || | || || ||| ||||||||| Sbjct 452489 GCAGCGATTGATCTTCGCTGGCAAGCAGCTCGAGGATGGCCGTACGCTCGCCGACTACAA 452548 Query 40869 CATCCAGAAGGAGGCCACGCTGCA 40892 ||||||||||||| | ||| |||| Sbjct 452549 CATCCAGAAGGAGTCGACGTTGCA 452572 >seq31 Length=897251 Score = 136 bits (150), Expect = 4e-27 Identities = 153/202 (76%), Gaps = 2/202 (1%) Strand=Plus/Plus Query 40692 GCAAATATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAAGCCACCGA 40751 |||||| ||||| || || || |||||||| || |||||| |||| ||||| | |||| Sbjct 114011 GCAAATCTTCGTCAAGACTCTTACGGGCAAGACGATCACCCTCGAGGTCGAGTCGTCCGA 114070 Query 40752 CAGCGTGCA-AACGCTCAAGGAAAAAATTCTCGACAAAGAGGGCATCCCCGCGGACCAGC 40810 || | | |||| |||||| || || | ||||| || |||||||| | ||||||| Sbjct 114071 CACGATCGACAACG-TCAAGGCCAAGATCCAAGACAAGGAAGGCATCCCGCCAGACCAGC 114129 Query 40811 AACGACTCATCTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTACAACA 40870 |||| ||||||| ||| ||||| ||||| || || | ||||| ||| |||||||||| Sbjct 114130 AACGTCTCATCTTCGCCGGCAAGCAGCTCGAGGATGGCCGCACTCTCGCGGACTACAACA 114189 Query 40871 TCCAGAAGGAGGCCACGCTGCA 40892 |||| |||||| | || || || Sbjct 114190 TCCAAAAGGAGTCGACCCTCCA 114211 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 515218407850480