Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Microbotryum_20violaceum_20[genbank_20GCA_5F900008855.1_202016-12-
23] 123 sequences; 24,532,870 total letters
Query= NC_002687.1
Length=335593
Score E
Sequences producing significant alignments: (Bits) Value
seq36 154 3e-32
>seq36
Length=1210608
Score = 154 bits (170), Expect = 3e-32
Identities = 482/742 (65%), Gaps = 17/742 (2%)
Strand=Plus/Plus
Query 248758 GTCATTCAGGACAACGCGCACCTCCTGGACGGCGCGATTGACTACGGCAAAGATTTGGAG 248817
||||| || |||||| ||| ||| || |||| | ||||| | ||||| |
Sbjct 4602 GTCATCATGGCCAACGCCGACCGCCTCAACAGCGCCGTCATCTACGACCGCGATTTCGGC 4661
Query 248818 TACGATTTCTTTGCTTTCAAAACGCTGGAGAAATCGTATCTCCTCAAAATTGATGGCAAG 248877
||| | | |||| ||||| || || ||| || || | || || || ||||||
Sbjct 4662 TACAACTATTTTGGCTTCAAGACACTCGAGCGCTCCTACTTGCTTCGCATCGACGGCAAG 4721
Query 248878 ATCGTGGAACGAATTCAGCACATGTTGATGCGAGTGGCTGTCGGGATTCACAAGGATGAC 248937
||| ||||| ||||||||| | ||||| || || ||||| || ||| | |||
Sbjct 4722 GTCGCCGAACGTCCGCAGCACATGCTCATGCGTGTCGCCGTCGGCATCCACGGTCACGAC 4781
Query 248938 ATAGAGAGCGTGCTCGAGACGTACACCGGAATGAGTGAACGCTGGATGACACATGCCACA 248997
|| ||| |||| | || | |||| | ||| || |||| | || || ||| |
Sbjct 4782 ATCGAGCGCGTCTTGCAGTCCTACAACCTCATGTCCGAGCGCTACTTCACCCACGCCTCG 4841
Query 248998 CCGACGCTCTTCAACGCCGGTACCGTCAACAATCAGCTGAGCTCGTGCTTTCTTCTTG-- 249055
|||||||||||||| ||||||||| || ||||| ||||| | | |||||||
Sbjct 4842 CCGACGCTCTTCAATGCCGGTACCCCTCACCCGCAGCT---CTCGT-CGTGCTTCTTGGT 4897
Query 249056 --CCATGCAAGACGACTCTGTCGACGGCATTTATGACACGCTTAAACAGACG---GCGAA 249110
| ||| | |||||||| | || ||||| || |||||||| | ||||| |||
Sbjct 4898 CACGATGAAGGACGACTCGATTGAAGGCATCTACGACACGCTCA---AGACGTGCGCGCT 4954
Query 249111 GATTTCTAAATTCGCGGGCGGAATCGGTCTCTCCGTCTCCAACATCCGAGCGAAGGGTTC 249170
|| || || ||| || || |||||| | | || ||||||||| |||| || ||
Sbjct 4955 CATCTCCAAGACCGCCGGTGGTATCGGTTTAAGCATCCACAACATCCGCGCGACCGGCTC 5014
Query 249171 GTACATCAAAGGTACAAATGGGGTCAGTGATGGTATCGTACCCCTCCTTCGATGCTTTGA 249230
|||||| || || || || | |||| ||||| ||| | || || || |
Sbjct 5015 CTACATCGCCGGCACGAACGGCTACTCGAATGGCATCGTCCCCATGCTGCGCGTCTACAA 5074
Query 249231 GTCCACCGCCAGGTTCATCAACCAGGCCGGGCGC---CGAAAGGGGTCGTTCGCCATGTA 249287
|||||| | | | || |||| | || | || || | ||||| || ||
Sbjct 5075 CAACACCGCGCGCTACGTCGACCAAGGTGGCAACAAGCGTCCCGGAGCCTTCGCGATCTA 5134
Query 249288 TTTGGAAGTGTGGCACGCCGATATATTGGAGTTCCTGGACTTGAAAAAGAACAACGGCAA 249347
| || |||||||||||| | || |||||||||||| | ||||| |||||||
Sbjct 5135 CCTCGAGCCGTGGCACGCCGACGTCTTCGAGTTCCTGGACCTTCGCAAGAATCACGGCAA 5194
Query 249348 CGAGCTCATGAGAGCGCGTGACCTCTTCTACGGCCTGTGGGTCTCCGACTTGTTCATGCG 249407
|| | | || ||||| ||||||| | || ||| || |||| ||||||||
Sbjct 5195 GGAAGAAGTCCGCGCTCGTGATCTCTTCTTTGCGCTCTGGATCCCCGATCTGTTCATGGA 5254
Query 249408 CCGCGTCAAGGCCGACGGCGATTGGACGCTTCTTTCTCCGTCCGACGCCCCGGACCTCAT 249467
|| ||| |||||| |||||| ||| | || | | || |||| ||||| | ||||
Sbjct 5255 GCGTGTCGAGGCCGCCGGCGAGTGGCCCCTCTTCTGCCCCGCCGAGGCCCCCGGCCTCCA 5314
Query 249468 CGATCTACACGGCGCCGACTTC 249489
||| | |||||| || |||
Sbjct 5315 CGAAGTCTACGGCGAAGAGTTC 5336
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 1073764707811264
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |