Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Microbotryum_20violaceum_20[genbank_20GCA_5F900008855.1_202016-12- 23] 123 sequences; 24,532,870 total letters Query= NC_002687.1 Length=335593 Score E Sequences producing significant alignments: (Bits) Value seq36 154 3e-32 >seq36 Length=1210608 Score = 154 bits (170), Expect = 3e-32 Identities = 482/742 (65%), Gaps = 17/742 (2%) Strand=Plus/Plus Query 248758 GTCATTCAGGACAACGCGCACCTCCTGGACGGCGCGATTGACTACGGCAAAGATTTGGAG 248817 ||||| || |||||| ||| ||| || |||| | ||||| | ||||| | Sbjct 4602 GTCATCATGGCCAACGCCGACCGCCTCAACAGCGCCGTCATCTACGACCGCGATTTCGGC 4661 Query 248818 TACGATTTCTTTGCTTTCAAAACGCTGGAGAAATCGTATCTCCTCAAAATTGATGGCAAG 248877 ||| | | |||| ||||| || || ||| || || | || || || |||||| Sbjct 4662 TACAACTATTTTGGCTTCAAGACACTCGAGCGCTCCTACTTGCTTCGCATCGACGGCAAG 4721 Query 248878 ATCGTGGAACGAATTCAGCACATGTTGATGCGAGTGGCTGTCGGGATTCACAAGGATGAC 248937 ||| ||||| ||||||||| | ||||| || || ||||| || ||| | ||| Sbjct 4722 GTCGCCGAACGTCCGCAGCACATGCTCATGCGTGTCGCCGTCGGCATCCACGGTCACGAC 4781 Query 248938 ATAGAGAGCGTGCTCGAGACGTACACCGGAATGAGTGAACGCTGGATGACACATGCCACA 248997 || ||| |||| | || | |||| | ||| || |||| | || || ||| | Sbjct 4782 ATCGAGCGCGTCTTGCAGTCCTACAACCTCATGTCCGAGCGCTACTTCACCCACGCCTCG 4841 Query 248998 CCGACGCTCTTCAACGCCGGTACCGTCAACAATCAGCTGAGCTCGTGCTTTCTTCTTG-- 249055 |||||||||||||| ||||||||| || ||||| ||||| | | ||||||| Sbjct 4842 CCGACGCTCTTCAATGCCGGTACCCCTCACCCGCAGCT---CTCGT-CGTGCTTCTTGGT 4897 Query 249056 --CCATGCAAGACGACTCTGTCGACGGCATTTATGACACGCTTAAACAGACG---GCGAA 249110 | ||| | |||||||| | || ||||| || |||||||| | ||||| ||| Sbjct 4898 CACGATGAAGGACGACTCGATTGAAGGCATCTACGACACGCTCA---AGACGTGCGCGCT 4954 Query 249111 GATTTCTAAATTCGCGGGCGGAATCGGTCTCTCCGTCTCCAACATCCGAGCGAAGGGTTC 249170 || || || ||| || || |||||| | | || ||||||||| |||| || || Sbjct 4955 CATCTCCAAGACCGCCGGTGGTATCGGTTTAAGCATCCACAACATCCGCGCGACCGGCTC 5014 Query 249171 GTACATCAAAGGTACAAATGGGGTCAGTGATGGTATCGTACCCCTCCTTCGATGCTTTGA 249230 |||||| || || || || | |||| ||||| ||| | || || || | Sbjct 5015 CTACATCGCCGGCACGAACGGCTACTCGAATGGCATCGTCCCCATGCTGCGCGTCTACAA 5074 Query 249231 GTCCACCGCCAGGTTCATCAACCAGGCCGGGCGC---CGAAAGGGGTCGTTCGCCATGTA 249287 |||||| | | | || |||| | || | || || | ||||| || || Sbjct 5075 CAACACCGCGCGCTACGTCGACCAAGGTGGCAACAAGCGTCCCGGAGCCTTCGCGATCTA 5134 Query 249288 TTTGGAAGTGTGGCACGCCGATATATTGGAGTTCCTGGACTTGAAAAAGAACAACGGCAA 249347 | || |||||||||||| | || |||||||||||| | ||||| ||||||| Sbjct 5135 CCTCGAGCCGTGGCACGCCGACGTCTTCGAGTTCCTGGACCTTCGCAAGAATCACGGCAA 5194 Query 249348 CGAGCTCATGAGAGCGCGTGACCTCTTCTACGGCCTGTGGGTCTCCGACTTGTTCATGCG 249407 || | | || ||||| ||||||| | || ||| || |||| |||||||| Sbjct 5195 GGAAGAAGTCCGCGCTCGTGATCTCTTCTTTGCGCTCTGGATCCCCGATCTGTTCATGGA 5254 Query 249408 CCGCGTCAAGGCCGACGGCGATTGGACGCTTCTTTCTCCGTCCGACGCCCCGGACCTCAT 249467 || ||| |||||| |||||| ||| | || | | || |||| ||||| | |||| Sbjct 5255 GCGTGTCGAGGCCGCCGGCGAGTGGCCCCTCTTCTGCCCCGCCGAGGCCCCCGGCCTCCA 5314 Query 249468 CGATCTACACGGCGCCGACTTC 249489 ||| | |||||| || ||| Sbjct 5315 CGAAGTCTACGGCGAAGAGTTC 5336 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1073764707811264