Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Microbotryum_20violaceum_20[genbank_20GCA_5F900008855.1_202016-12- 23] 123 sequences; 24,532,870 total letters Query= NC_003102.1 Length=139342 Score E Sequences producing significant alignments: (Bits) Value seq36 250 2e-61 seq31 114 1e-20 seq79 109 5e-19 seq21 95.1 1e-14 >seq36 Length=1210608 Score = 250 bits (276), Expect = 2e-61 Identities = 905/1402 (65%), Gaps = 60/1402 (4%) Strand=Plus/Minus Query 22502 GATGTGAACGGTTCGAAAGATTCATTGTTTCCCAGTATCTGAGCGGTCGAAGCGGTCGGC 22561 || ||| | || ||||| |||| ||| || || |||||| ||||| ||||||||| Sbjct 6121 GAAGTGTAAGGCTCGAAGCATTCGTTGAAGCCGAGGATCTGACTCGTCGACGCGGTCGGC 6062 Query 22562 ATCGGCGCCAACAGTAGCGAGTTTCTCAAGCCGTGCTTTGAAATTTTACTCTTGAGCATC 22621 |||||||| ||| |||||||| | || |||||||| | ||| || ||||||| Sbjct 6061 ATCGGCGCACACACGAGCGAGTTGCGCAGACCGTGCTTGGCAATCTTCTCCTTGAGCTCG 6002 Query 22622 GACCAGTCCCACAGATCGGACGGCGTCACATTGTCCCACATATCGTATTGCAACACGCC- 22680 |||||||||||||||||| ||| |||||| |||||| ||||| |||||| |||| Sbjct 6001 GACCAGTCCCACAGATCGCTCGGGGTCACAC---CCCACAGGTCGTACTGCAACTCGCCC 5945 Query 22681 -GCGACTCGCCGGGCTGCCTTCGTA---CGTTTCGTA--CGGA----CCATATATCGCG- 22729 |||| ||||| || ||| ||| | ||| ||| ||| | ||| Sbjct 5944 TGCGAG--GCCGGCGATCCGGGGTAAGTCGTGTAGTAGCCGGGGTCGCCAGGGTTGGCGA 5887 Query 22730 --GCAAGTTCGCA-GC----TCGC-------CTCCAACGCGCCGTAATATATAGTCTCGA 22775 |||| |||| || |||| ||| | |||| ||| || || ||||||| Sbjct 5886 TGGCAAAGTCGCGCGCCATGTCGCACGAAGACTCGATCGCGGCGTGGTAGATGGTCTCGA 5827 Query 22776 AGATTTTCTTGTTCAATTCG-GCGGC---GGCGACGCTTTCGTACGGCATACGCATCATC 22831 |||| | |||||| | | | ||| | ||||| ||| ||||||| || | Sbjct 5826 AGATCTGCTTGTTGAGCTTGCGCGCCTCAGGCGAA----TCGAACGGCATCGCCAAGGCC 5771 Query 22832 ACGAACGCGTCCGCCATACCCTGAACGCCTATACCGATCGGTCGGTTTTTCAGATTCGAC 22891 | |||||| || || | ||| || || || || ||||| || |||| | || || Sbjct 5770 ATGAACGCATCGGCGAGACCTTGCACTCCGATGCCGATGGGGCGGTGGCGGAAGTTGGAA 5711 Query 22892 ACTTTTGCCTCGGGCAAAGGATACCAATTCGAATCGATTGTTCTGTTCAAGTTTCTGGTC 22951 || |||||| | || || | || ||||| | | ||||||||| | Sbjct 5710 TTTTGCGCCTCGATGACGGGGTAGTAGTTGACGTCGATGATGCGGTTCAAGTTAAACGCA 5651 Query 22952 ACAATTTTCGTTATNNNNNNNNNNNNNTCAAAGTCGTAAACGCCCGATTGTACAACAAAC 23011 || | || | | |||||||| ||||| || | | || | Sbjct 5650 ACGACCTTGACGACCTCGTGCAGCTTTTTGAAGTCGTACACGCCG--TTCTTGATGAAGC 5593 Query 23012 TTGTTGACGGCGATCGAGGCAAGATTGCATACGGCCACCTCGTCTTTGGACGTGTACTCT 23071 | | ||| ||||||| || | ||||| || || |||||| | || |||||| Sbjct 5592 TCGGCAACG-CGATCGAAGCCAAGTTGCAGACAGCGCACTCGTCGGGAGCCGAGTACTCG 5534 Query 23072 ACAATTTCGGTACATAGATTGCTACACTTT-ATCGTGCCCAAATTGCTCTGGTT-GCTTT 23129 | || ||||| || || || | || ||| |||||||| | || | ||||| | || Sbjct 5533 ATGATCTCGGTGCACAGGTT-CGACGATTTGATCGTGCCGAGGTTCTTTTGGTTCGACTT 5475 Query 23130 TTCGATTGCACGAATCCTTGTAGAGCATGTACGGCGTGCCCGTCTCGACCTGCGACTCGA 23189 || | | || | ||||||||||||||| | || |||| ||||||||||| | ||||| Sbjct 5474 TTTGTTCGCG-GCGTCCTTGTAGAGCATGAAGGGGTTGCCGGTCTCGACCTGGGCCTCGA 5416 Query 23190 TGATCGCTCGCCACATAGTCTGAGCGTGAACA-----CGTCGCACGTACCTGCCTTCTTC 23244 |||||| ||| | | || ||| | | | | || || ||| | || Sbjct 5415 GGATCGCGTACCAAAGCTTTTGCGCGGGGATGGTCTTCTTGGCGCGACCCTCCTTT---- 5360 Query 23245 CTCGTACTTTTGGTACA--ACGCGTCAAATTCGGCACCGTAACAGTCGGCCAGGCCGGGC 23302 |||||||| | | ||| ||||| || || | ||||| ||| |||||||| Sbjct 5359 -TCGTACTTCTCGAACAGGACGCGG--AACTCTTCGCCGTAGACTTCGTGGAGGCCGGGG 5303 Query 23303 GATTGCATCGGACACATGAGACTCCACATTGAGTCATTTTCAACGCGTCTCATAAAAAGA 23362 | | || || | ||| |||| | | || || || ||| || ||| Sbjct 5302 GCCTCGGCGGGGCAGAAGAGGGGCCACTCGCCGGCGGCCTCGACACGCTCCATGAACAGA 5243 Query 23363 TCCGGTATCCATAGAGCGTAGAACAGTTCGCGGGCGCGCACCTCCTCTTTGCCGGTGTTC 23422 || || ||||| || || |||| || || || ||||| || || || |||||| ||| Sbjct 5242 TCGGGGATCCAGAGCGCAAAGAAGAGATCACGAGCGCGGACTTCTTCCTTGCCGTGATTC 5183 Query 23423 TTTTTCAAATCCAAAAAGTCCAACACGTCCGCATGCCACGGCTCGAGGTAAACGGCAAAC 23482 || | |||| || || || ||||| || ||||||||||||||||| | || || Sbjct 5182 TTGCGAAGGTCCAGGAACTCGAAGACGTCGGCGTGCCACGGCTCGAGGTAGATCGCGAAG 5123 Query 23483 GCGCCCGGTCTCTTATTGCCGCCCTGATCGACGTAACGGGCCGTGTTGTTGTACACTCTT 23542 || || || | ||| ||||| || || |||||||| || || ||||||||||| || | Sbjct 5122 GCTCCGGGACGCTTGTTGCCACCTTGGTCGACGTAGCGCGCGGTGTTGTTGTAGACGCGC 5063 Query 23543 AGCATCGGCACGAGACCGTTGGACGCGCCGCCTACGCCCGCCACACTCGAACCTTTTGCT 23602 ||||| || |||| || || || |||| ||| || | || || | || Sbjct 5062 AGCATGGGGACGATGCCATTCGAGTAGCCGTTCGTGCCGGCGATGTAGGAGCCGGTCGCG 5003 Query 23603 CGAACGTTGTGAACGTGGAAACCTATGCCTCCGCCCGATTTCGATATCATCGCGCATTGT 23662 || | |||||| | | ||||| || || ||| | | || || || | |||||| Sbjct 5002 CGGATGTTGTGGATGCTTAAACCGATACCACCGGCGGTCTTGGAGATGAGCGCGCACGTC 4943 Query 23663 TTCAGAGTGTCGTAGATGCCCTCGATGCTGTCCTCTTTGGTCGCGACCAAGAAACACGAA 23722 || || |||||||||||||| || || ||| || || ||| ||||||||| ||||| Sbjct 4942 TTGAGCGTGTCGTAGATGCCTTCAATCGAGTCGTCCTTCATCGTGACCAAGAAGCACGAC 4883 Query 23723 GACATTTGCGCTTTGGGCGTAGCGGCCGAGAACAGTGTCGGGCTGGCGTGCGTAAAGTAT 23782 || | |||| | || ||| |||| ||| || ||||| |||||| || ||||| Sbjct 4882 GAGAGCTGCGGGTGAGGGGTACCGGCATTGAAGAGCGTCGGCGAGGCGTGGGTGAAGTAG 4823 Query 23783 CCATTCGACATTAGATTGTACGTGTCGATGGCGGCATCAATGTCCTCTCCGTGTATACCG 23842 | | ||||| || ||||| | | | | || || ||||| | ||||| || ||| Sbjct 4822 CGCTCGGACATGAGGTTGTAGGACTGCAAGACGCGCTCGATGTCGTGACCGTGGATGCCG 4763 Query 23843 ATGGCGACGCGCATCATCATGT 23864 | |||||| ||||| | ||||| Sbjct 4762 ACGGCGACACGCATGAGCATGT 4741 >seq31 Length=897251 Score = 114 bits (126), Expect = 1e-20 Identities = 155/216 (72%), Gaps = 0/216 (0%) Strand=Plus/Plus Query 31189 AAACATGCAAATTTTCGTAAAGACTCTGACAGGCAAAACGATCACCGTCGACGTTGAACC 31248 || || |||||| ||||| |||||||| || ||||| ||||||||| |||| || || | Sbjct 114005 AATCAGGCAAATCTTCGTCAAGACTCTTACGGGCAAGACGATCACCCTCGAGGTCGAGTC 114064 Query 31249 GTCCGACAGTGTCGAAACGGTCAAACAGAGAATAGCGGACAAGGAAGGCGTGCCGCCCGA 31308 |||||||| |||| | ||||| | || |||||||||||| | ||||| || Sbjct 114065 GTCCGACACGATCGACAACGTCAAGGCCAAGATCCAAGACAAGGAAGGCATCCCGCCAGA 114124 Query 31309 CCAGCAGCGTCTAATATTCGCTGGCAAACAGTTGGAAGACTCTATGACTATGAGCGATTA 31368 |||||| ||||| || ||||| ||||| ||| | || || ||| | || || Sbjct 114125 CCAGCAACGTCTCATCTTCGCCGGCAAGCAGCTCGAGGATGGCCGCACTCTCGCGGACTA 114184 Query 31369 TAACATTCAAAAAGAATCGACTCTTCATCTGGTACT 31404 ||||| ||||| || ||||| || || |||| || Sbjct 114185 CAACATCCAAAAGGAGTCGACCCTCCACTTGGTCCT 114220 >seq79 Length=1842920 Score = 109 bits (120), Expect = 5e-19 Identities = 152/212 (72%), Gaps = 1/212 (0%) Strand=Plus/Plus Query 31193 ATGCAAATTTTCGTAAAGACTCTGACAGGCAAAACGATCACCGTCGACGTTGAACCGTCC 31252 |||||||| ||||| ||||| ||||| |||||||||||||| |||| ||||| |||| Sbjct 452826 ATGCAAATCTTCGTCAAGACCCTGACCGGCAAAACGATCACGCTCGAGGTTGAGTCGTCG 452885 Query 31253 GACAGTGTCGAAACGGTCAAACAGAGAATAGCGGACAAGGAAGGCGTGCCGCCCGACCAG 31312 |||| |||| | ||||| | || ||||||||| ||| | || || |||||| Sbjct 452886 GACACGATCGACAACGTCAAGGCCAAGATTCAGGACAAGGAGGGCAT-CCCCCAGACCAG 452944 Query 31313 CAGCGTCTAATATTCGCTGGCAAACAGTTGGAAGACTCTATGACTATGAGCGATTATAAC 31372 ||||| | || ||||||||||| ||| | || || || | ||| |||||| Sbjct 452945 CAGCGATTGATCTTCGCTGGCAAGCAGCTCGAGGATGGCCGTACGCTCGCCGACTATAAC 453004 Query 31373 ATTCAAAAAGAATCGACTCTTCATCTGGTACT 31404 || || || || ||||| || || |||| || Sbjct 453005 ATCCAGAAGGAGTCGACGCTCCACTTGGTGCT 453036 Score = 104 bits (114), Expect = 2e-17 Identities = 116/155 (75%), Gaps = 0/155 (0%) Strand=Plus/Plus Query 31193 ATGCAAATTTTCGTAAAGACTCTGACAGGCAAAACGATCACCGTCGACGTTGAACCGTCC 31252 |||||||| ||||| ||||| ||||| |||||||||||||| |||| ||||| |||| Sbjct 451687 ATGCAAATCTTCGTCAAGACCCTGACCGGCAAAACGATCACGCTCGAGGTTGAGTCGTCG 451746 Query 31253 GACAGTGTCGAAACGGTCAAACAGAGAATAGCGGACAAGGAAGGCGTGCCGCCCGACCAG 31312 |||| |||| | || || | || ||||||||| ||| | || || |||||| Sbjct 451747 GACACGATCGACAACGTGAAGGCCAAGATCCAGGACAAGGAGGGCATCCCCCCAGACCAG 451806 Query 31313 CAGCGTCTAATATTCGCTGGCAAACAGTTGGAAGA 31347 ||||| | || ||||||||||| ||| | || || Sbjct 451807 CAGCGATTGATCTTCGCTGGCAAGCAGCTCGAGGA 451841 Score = 104 bits (114), Expect = 2e-17 Identities = 116/155 (75%), Gaps = 0/155 (0%) Strand=Plus/Plus Query 31193 ATGCAAATTTTCGTAAAGACTCTGACAGGCAAAACGATCACCGTCGACGTTGAACCGTCC 31252 |||||||| ||||| ||||| ||||| |||||||||||||| |||| ||||| |||| Sbjct 452143 ATGCAAATCTTCGTCAAGACCCTGACCGGCAAAACGATCACGCTCGAGGTTGAGTCGTCG 452202 Query 31253 GACAGTGTCGAAACGGTCAAACAGAGAATAGCGGACAAGGAAGGCGTGCCGCCCGACCAG 31312 |||| |||| | || || | || ||||||||| ||| | || || |||||| Sbjct 452203 GACACGATCGACAACGTGAAGGCCAAGATCCAGGACAAGGAGGGCATCCCCCCAGACCAG 452262 Query 31313 CAGCGTCTAATATTCGCTGGCAAACAGTTGGAAGA 31347 ||||| | || ||||||||||| ||| | || || Sbjct 452263 CAGCGATTGATCTTCGCTGGCAAGCAGCTCGAGGA 452297 Score = 104 bits (114), Expect = 2e-17 Identities = 116/155 (75%), Gaps = 0/155 (0%) Strand=Plus/Plus Query 31193 ATGCAAATTTTCGTAAAGACTCTGACAGGCAAAACGATCACCGTCGACGTTGAACCGTCC 31252 |||||||| ||||| ||||| ||||| |||||||||||||| |||| || || |||| Sbjct 678891 ATGCAAATCTTCGTCAAGACCCTGACCGGCAAAACGATCACGCTCGAGGTCGAGTCGTCG 678950 Query 31253 GACAGTGTCGAAACGGTCAAACAGAGAATAGCGGACAAGGAAGGCGTGCCGCCCGACCAG 31312 |||| |||| | ||||| | || ||||||||| ||| | || || |||||| Sbjct 678951 GACACGATCGACAACGTCAAGGCCAAGATCCAGGACAAGGAGGGCATTCCTCCAGACCAG 679010 Query 31313 CAGCGTCTAATATTCGCTGGCAAACAGTTGGAAGA 31347 ||||| | || ||||||||||| ||| | || || Sbjct 679011 CAGCGATTGATCTTCGCTGGCAAGCAGCTCGAGGA 679045 Score = 100 bits (110), Expect = 3e-16 Identities = 116/155 (75%), Gaps = 1/155 (1%) Strand=Plus/Plus Query 31193 ATGCAAATTTTCGTAAAGACTCTGACAGGCAAAACGATCACCGTCGACGTTGAACCGTCC 31252 |||||||| ||||| ||||| ||||| |||||||||||||| |||| ||||| |||| Sbjct 452371 ATGCAAATCTTCGTCAAGACCCTGACCGGCAAAACGATCACGCTCGAGGTTGAGTCGTCG 452430 Query 31253 GACAGTGTCGAAACGGTCAAACAGAGAATAGCGGACAAGGAAGGCGTGCCGCCCGACCAG 31312 |||| |||| | || || | || ||||||||| ||| | || || |||||| Sbjct 452431 GACACGATCGACAACGTGAAGGCCAAGATCCAGGACAAGGAGGGCAT-CCCCCAGACCAG 452489 Query 31313 CAGCGTCTAATATTCGCTGGCAAACAGTTGGAAGA 31347 ||||| | || ||||||||||| ||| | || || Sbjct 452490 CAGCGATTGATCTTCGCTGGCAAGCAGCTCGAGGA 452524 Score = 100 bits (110), Expect = 3e-16 Identities = 115/155 (74%), Gaps = 0/155 (0%) Strand=Plus/Plus Query 31193 ATGCAAATTTTCGTAAAGACTCTGACAGGCAAAACGATCACCGTCGACGTTGAACCGTCC 31252 |||||||| ||||| ||||| ||||| ||||| |||||||| |||| || || |||| Sbjct 678663 ATGCAAATCTTCGTCAAGACCCTGACTGGCAAGACGATCACGCTCGAGGTCGAGTCGTCG 678722 Query 31253 GACAGTGTCGAAACGGTCAAACAGAGAATAGCGGACAAGGAAGGCGTGCCGCCCGACCAG 31312 |||| |||| | ||||| | || ||||||||| ||| | || || |||||| Sbjct 678723 GACACGATCGACAACGTCAAGGCCAAGATCCAGGACAAGGAGGGCATCCCTCCAGACCAG 678782 Query 31313 CAGCGTCTAATATTCGCTGGCAAACAGTTGGAAGA 31347 ||||| | || ||||||||||| ||| | || || Sbjct 678783 CAGCGATTGATCTTCGCTGGCAAGCAGCTCGAGGA 678817 Score = 100 bits (110), Expect = 3e-16 Identities = 115/155 (74%), Gaps = 0/155 (0%) Strand=Plus/Plus Query 31193 ATGCAAATTTTCGTAAAGACTCTGACAGGCAAAACGATCACCGTCGACGTTGAACCGTCC 31252 |||||||| || || ||||| ||||| |||||||||||||| |||| || || |||| Sbjct 679119 ATGCAAATCTTTGTCAAGACCCTGACCGGCAAAACGATCACGCTCGAGGTCGAGTCGTCG 679178 Query 31253 GACAGTGTCGAAACGGTCAAACAGAGAATAGCGGACAAGGAAGGCGTGCCGCCCGACCAG 31312 |||| |||| | ||||| | || ||||||||| ||| | || || |||||| Sbjct 679179 GACACGATCGACAACGTCAAGGCCAAGATTCAGGACAAGGAGGGCATCCCTCCAGACCAG 679238 Query 31313 CAGCGTCTAATATTCGCTGGCAAACAGTTGGAAGA 31347 ||||| | || ||||||||||| ||| | || || Sbjct 679239 CAGCGATTGATCTTCGCTGGCAAGCAGCTCGAGGA 679273 Score = 95.1 bits (104), Expect = 1e-14 Identities = 114/155 (74%), Gaps = 0/155 (0%) Strand=Plus/Plus Query 31193 ATGCAAATTTTCGTAAAGACTCTGACAGGCAAAACGATCACCGTCGACGTTGAACCGTCC 31252 |||||||| || || ||||| ||||| || ||||||||||| |||| || || |||| Sbjct 451915 ATGCAAATCTTTGTCAAGACCCTGACCGGTAAAACGATCACGCTCGAGGTCGAGTCGTCG 451974 Query 31253 GACAGTGTCGAAACGGTCAAACAGAGAATAGCGGACAAGGAAGGCGTGCCGCCCGACCAG 31312 |||| |||| | ||||| | || ||||||||| ||| | || || |||||| Sbjct 451975 GACACGATCGACAACGTCAAGGCCAAGATTCAGGACAAGGAGGGCATCCCCCCAGACCAG 452034 Query 31313 CAGCGTCTAATATTCGCTGGCAAACAGTTGGAAGA 31347 ||||| | || ||||||||||| ||| | || || Sbjct 452035 CAGCGATTGATCTTCGCTGGCAAGCAGCTCGAGGA 452069 Score = 95.1 bits (104), Expect = 1e-14 Identities = 114/155 (74%), Gaps = 0/155 (0%) Strand=Plus/Plus Query 31193 ATGCAAATTTTCGTAAAGACTCTGACAGGCAAAACGATCACCGTCGACGTTGAACCGTCC 31252 |||||||| || || ||||| ||||| || ||||||||||| |||| || || |||| Sbjct 452598 ATGCAAATCTTTGTCAAGACCCTGACCGGTAAAACGATCACGCTCGAGGTCGAGTCGTCG 452657 Query 31253 GACAGTGTCGAAACGGTCAAACAGAGAATAGCGGACAAGGAAGGCGTGCCGCCCGACCAG 31312 |||| |||| | ||||| | || ||||||||| ||| | || || |||||| Sbjct 452658 GACACGATCGACAACGTCAAGGCCAAGATTCAGGACAAGGAGGGCATCCCCCCAGACCAG 452717 Query 31313 CAGCGTCTAATATTCGCTGGCAAACAGTTGGAAGA 31347 ||||| | || ||||||||||| ||| | || || Sbjct 452718 CAGCGATTGATCTTCGCTGGCAAGCAGCTCGAGGA 452752 >seq21 Length=1587489 Score = 95.1 bits (104), Expect = 1e-14 Identities = 164/238 (69%), Gaps = 4/238 (2%) Strand=Plus/Minus Query 31194 TGCAAATTTTCGTAAAGACTCTGACAGGCAAAACGATCACCGTCGACGTTGAACCGTCCG 31253 ||||||| ||||| ||||| || || ||||| || |||||| |||| || || | |||| Sbjct 1354364 TGCAAATCTTCGTCAAGACCCTTACGGGCAAGACCATCACCCTCGAGGTCGAGTCCTCCG 1354305 Query 31254 ACAGTGTCGAAACGGTCAAACAGAGAATAGCGGACAAGGAAGGCGTGCCGCCCGACCAGC 31313 ||| |||| | ||||| | || ||||||||||| | || || ||||||| Sbjct 1354304 ACACGATCGACAACGTCAAGGCCAAGATCCAAGACAAGGAAGGAATTCCCCCAGACCAGC 1354245 Query 31314 AGCGTCTAATATTCGCTGGCAAACAGTTGGAAGACTCTATGACTATGAGCGATTATAACA 31373 | ||||| || ||||| ||||| ||| | || || ||| | || || |||| Sbjct 1354244 AACGTCTCATCTTCGCCGGCAAGCAGCTCGAGGATGGCCGTACTCTCGCGGACTACAACA 1354185 Query 31374 TTCAAAAAGAATCGACTCTTCATCTGGTACTTAGACTGAGGGGCGGT----AGAAGCG 31427 | ||||| || ||||| || || |||| || | ||| | || ||| ||||||| Sbjct 1354184 TCCAAAAGGAGTCGACCCTCCACTTGGTGCTCCGCCTGCGCGGTGGTGCCAAGAAGCG 1354127 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 445765714634160