Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Microbotryum_20violaceum_20[genbank_20GCA_5F900008855.1_202016-12-
23] 123 sequences; 24,532,870 total letters
Query= NC_003102.1
Length=139342
Score E
Sequences producing significant alignments: (Bits) Value
seq36 250 2e-61
seq31 114 1e-20
seq79 109 5e-19
seq21 95.1 1e-14
>seq36
Length=1210608
Score = 250 bits (276), Expect = 2e-61
Identities = 905/1402 (65%), Gaps = 60/1402 (4%)
Strand=Plus/Minus
Query 22502 GATGTGAACGGTTCGAAAGATTCATTGTTTCCCAGTATCTGAGCGGTCGAAGCGGTCGGC 22561
|| ||| | || ||||| |||| ||| || || |||||| ||||| |||||||||
Sbjct 6121 GAAGTGTAAGGCTCGAAGCATTCGTTGAAGCCGAGGATCTGACTCGTCGACGCGGTCGGC 6062
Query 22562 ATCGGCGCCAACAGTAGCGAGTTTCTCAAGCCGTGCTTTGAAATTTTACTCTTGAGCATC 22621
|||||||| ||| |||||||| | || |||||||| | ||| || |||||||
Sbjct 6061 ATCGGCGCACACACGAGCGAGTTGCGCAGACCGTGCTTGGCAATCTTCTCCTTGAGCTCG 6002
Query 22622 GACCAGTCCCACAGATCGGACGGCGTCACATTGTCCCACATATCGTATTGCAACACGCC- 22680
|||||||||||||||||| ||| |||||| |||||| ||||| |||||| ||||
Sbjct 6001 GACCAGTCCCACAGATCGCTCGGGGTCACAC---CCCACAGGTCGTACTGCAACTCGCCC 5945
Query 22681 -GCGACTCGCCGGGCTGCCTTCGTA---CGTTTCGTA--CGGA----CCATATATCGCG- 22729
|||| ||||| || ||| ||| | ||| ||| ||| | |||
Sbjct 5944 TGCGAG--GCCGGCGATCCGGGGTAAGTCGTGTAGTAGCCGGGGTCGCCAGGGTTGGCGA 5887
Query 22730 --GCAAGTTCGCA-GC----TCGC-------CTCCAACGCGCCGTAATATATAGTCTCGA 22775
|||| |||| || |||| ||| | |||| ||| || || |||||||
Sbjct 5886 TGGCAAAGTCGCGCGCCATGTCGCACGAAGACTCGATCGCGGCGTGGTAGATGGTCTCGA 5827
Query 22776 AGATTTTCTTGTTCAATTCG-GCGGC---GGCGACGCTTTCGTACGGCATACGCATCATC 22831
|||| | |||||| | | | ||| | ||||| ||| ||||||| || |
Sbjct 5826 AGATCTGCTTGTTGAGCTTGCGCGCCTCAGGCGAA----TCGAACGGCATCGCCAAGGCC 5771
Query 22832 ACGAACGCGTCCGCCATACCCTGAACGCCTATACCGATCGGTCGGTTTTTCAGATTCGAC 22891
| |||||| || || | ||| || || || || ||||| || |||| | || ||
Sbjct 5770 ATGAACGCATCGGCGAGACCTTGCACTCCGATGCCGATGGGGCGGTGGCGGAAGTTGGAA 5711
Query 22892 ACTTTTGCCTCGGGCAAAGGATACCAATTCGAATCGATTGTTCTGTTCAAGTTTCTGGTC 22951
|| |||||| | || || | || ||||| | | ||||||||| |
Sbjct 5710 TTTTGCGCCTCGATGACGGGGTAGTAGTTGACGTCGATGATGCGGTTCAAGTTAAACGCA 5651
Query 22952 ACAATTTTCGTTATNNNNNNNNNNNNNTCAAAGTCGTAAACGCCCGATTGTACAACAAAC 23011
|| | || | | |||||||| ||||| || | | || |
Sbjct 5650 ACGACCTTGACGACCTCGTGCAGCTTTTTGAAGTCGTACACGCCG--TTCTTGATGAAGC 5593
Query 23012 TTGTTGACGGCGATCGAGGCAAGATTGCATACGGCCACCTCGTCTTTGGACGTGTACTCT 23071
| | ||| ||||||| || | ||||| || || |||||| | || ||||||
Sbjct 5592 TCGGCAACG-CGATCGAAGCCAAGTTGCAGACAGCGCACTCGTCGGGAGCCGAGTACTCG 5534
Query 23072 ACAATTTCGGTACATAGATTGCTACACTTT-ATCGTGCCCAAATTGCTCTGGTT-GCTTT 23129
| || ||||| || || || | || ||| |||||||| | || | ||||| | ||
Sbjct 5533 ATGATCTCGGTGCACAGGTT-CGACGATTTGATCGTGCCGAGGTTCTTTTGGTTCGACTT 5475
Query 23130 TTCGATTGCACGAATCCTTGTAGAGCATGTACGGCGTGCCCGTCTCGACCTGCGACTCGA 23189
|| | | || | ||||||||||||||| | || |||| ||||||||||| | |||||
Sbjct 5474 TTTGTTCGCG-GCGTCCTTGTAGAGCATGAAGGGGTTGCCGGTCTCGACCTGGGCCTCGA 5416
Query 23190 TGATCGCTCGCCACATAGTCTGAGCGTGAACA-----CGTCGCACGTACCTGCCTTCTTC 23244
|||||| ||| | | || ||| | | | | || || ||| | ||
Sbjct 5415 GGATCGCGTACCAAAGCTTTTGCGCGGGGATGGTCTTCTTGGCGCGACCCTCCTTT---- 5360
Query 23245 CTCGTACTTTTGGTACA--ACGCGTCAAATTCGGCACCGTAACAGTCGGCCAGGCCGGGC 23302
|||||||| | | ||| ||||| || || | ||||| ||| ||||||||
Sbjct 5359 -TCGTACTTCTCGAACAGGACGCGG--AACTCTTCGCCGTAGACTTCGTGGAGGCCGGGG 5303
Query 23303 GATTGCATCGGACACATGAGACTCCACATTGAGTCATTTTCAACGCGTCTCATAAAAAGA 23362
| | || || | ||| |||| | | || || || ||| || |||
Sbjct 5302 GCCTCGGCGGGGCAGAAGAGGGGCCACTCGCCGGCGGCCTCGACACGCTCCATGAACAGA 5243
Query 23363 TCCGGTATCCATAGAGCGTAGAACAGTTCGCGGGCGCGCACCTCCTCTTTGCCGGTGTTC 23422
|| || ||||| || || |||| || || || ||||| || || || |||||| |||
Sbjct 5242 TCGGGGATCCAGAGCGCAAAGAAGAGATCACGAGCGCGGACTTCTTCCTTGCCGTGATTC 5183
Query 23423 TTTTTCAAATCCAAAAAGTCCAACACGTCCGCATGCCACGGCTCGAGGTAAACGGCAAAC 23482
|| | |||| || || || ||||| || ||||||||||||||||| | || ||
Sbjct 5182 TTGCGAAGGTCCAGGAACTCGAAGACGTCGGCGTGCCACGGCTCGAGGTAGATCGCGAAG 5123
Query 23483 GCGCCCGGTCTCTTATTGCCGCCCTGATCGACGTAACGGGCCGTGTTGTTGTACACTCTT 23542
|| || || | ||| ||||| || || |||||||| || || ||||||||||| || |
Sbjct 5122 GCTCCGGGACGCTTGTTGCCACCTTGGTCGACGTAGCGCGCGGTGTTGTTGTAGACGCGC 5063
Query 23543 AGCATCGGCACGAGACCGTTGGACGCGCCGCCTACGCCCGCCACACTCGAACCTTTTGCT 23602
||||| || |||| || || || |||| ||| || | || || | ||
Sbjct 5062 AGCATGGGGACGATGCCATTCGAGTAGCCGTTCGTGCCGGCGATGTAGGAGCCGGTCGCG 5003
Query 23603 CGAACGTTGTGAACGTGGAAACCTATGCCTCCGCCCGATTTCGATATCATCGCGCATTGT 23662
|| | |||||| | | ||||| || || ||| | | || || || | ||||||
Sbjct 5002 CGGATGTTGTGGATGCTTAAACCGATACCACCGGCGGTCTTGGAGATGAGCGCGCACGTC 4943
Query 23663 TTCAGAGTGTCGTAGATGCCCTCGATGCTGTCCTCTTTGGTCGCGACCAAGAAACACGAA 23722
|| || |||||||||||||| || || ||| || || ||| ||||||||| |||||
Sbjct 4942 TTGAGCGTGTCGTAGATGCCTTCAATCGAGTCGTCCTTCATCGTGACCAAGAAGCACGAC 4883
Query 23723 GACATTTGCGCTTTGGGCGTAGCGGCCGAGAACAGTGTCGGGCTGGCGTGCGTAAAGTAT 23782
|| | |||| | || ||| |||| ||| || ||||| |||||| || |||||
Sbjct 4882 GAGAGCTGCGGGTGAGGGGTACCGGCATTGAAGAGCGTCGGCGAGGCGTGGGTGAAGTAG 4823
Query 23783 CCATTCGACATTAGATTGTACGTGTCGATGGCGGCATCAATGTCCTCTCCGTGTATACCG 23842
| | ||||| || ||||| | | | | || || ||||| | ||||| || |||
Sbjct 4822 CGCTCGGACATGAGGTTGTAGGACTGCAAGACGCGCTCGATGTCGTGACCGTGGATGCCG 4763
Query 23843 ATGGCGACGCGCATCATCATGT 23864
| |||||| ||||| | |||||
Sbjct 4762 ACGGCGACACGCATGAGCATGT 4741
>seq31
Length=897251
Score = 114 bits (126), Expect = 1e-20
Identities = 155/216 (72%), Gaps = 0/216 (0%)
Strand=Plus/Plus
Query 31189 AAACATGCAAATTTTCGTAAAGACTCTGACAGGCAAAACGATCACCGTCGACGTTGAACC 31248
|| || |||||| ||||| |||||||| || ||||| ||||||||| |||| || || |
Sbjct 114005 AATCAGGCAAATCTTCGTCAAGACTCTTACGGGCAAGACGATCACCCTCGAGGTCGAGTC 114064
Query 31249 GTCCGACAGTGTCGAAACGGTCAAACAGAGAATAGCGGACAAGGAAGGCGTGCCGCCCGA 31308
|||||||| |||| | ||||| | || |||||||||||| | ||||| ||
Sbjct 114065 GTCCGACACGATCGACAACGTCAAGGCCAAGATCCAAGACAAGGAAGGCATCCCGCCAGA 114124
Query 31309 CCAGCAGCGTCTAATATTCGCTGGCAAACAGTTGGAAGACTCTATGACTATGAGCGATTA 31368
|||||| ||||| || ||||| ||||| ||| | || || ||| | || ||
Sbjct 114125 CCAGCAACGTCTCATCTTCGCCGGCAAGCAGCTCGAGGATGGCCGCACTCTCGCGGACTA 114184
Query 31369 TAACATTCAAAAAGAATCGACTCTTCATCTGGTACT 31404
||||| ||||| || ||||| || || |||| ||
Sbjct 114185 CAACATCCAAAAGGAGTCGACCCTCCACTTGGTCCT 114220
>seq79
Length=1842920
Score = 109 bits (120), Expect = 5e-19
Identities = 152/212 (72%), Gaps = 1/212 (0%)
Strand=Plus/Plus
Query 31193 ATGCAAATTTTCGTAAAGACTCTGACAGGCAAAACGATCACCGTCGACGTTGAACCGTCC 31252
|||||||| ||||| ||||| ||||| |||||||||||||| |||| ||||| ||||
Sbjct 452826 ATGCAAATCTTCGTCAAGACCCTGACCGGCAAAACGATCACGCTCGAGGTTGAGTCGTCG 452885
Query 31253 GACAGTGTCGAAACGGTCAAACAGAGAATAGCGGACAAGGAAGGCGTGCCGCCCGACCAG 31312
|||| |||| | ||||| | || ||||||||| ||| | || || ||||||
Sbjct 452886 GACACGATCGACAACGTCAAGGCCAAGATTCAGGACAAGGAGGGCAT-CCCCCAGACCAG 452944
Query 31313 CAGCGTCTAATATTCGCTGGCAAACAGTTGGAAGACTCTATGACTATGAGCGATTATAAC 31372
||||| | || ||||||||||| ||| | || || || | ||| ||||||
Sbjct 452945 CAGCGATTGATCTTCGCTGGCAAGCAGCTCGAGGATGGCCGTACGCTCGCCGACTATAAC 453004
Query 31373 ATTCAAAAAGAATCGACTCTTCATCTGGTACT 31404
|| || || || ||||| || || |||| ||
Sbjct 453005 ATCCAGAAGGAGTCGACGCTCCACTTGGTGCT 453036
Score = 104 bits (114), Expect = 2e-17
Identities = 116/155 (75%), Gaps = 0/155 (0%)
Strand=Plus/Plus
Query 31193 ATGCAAATTTTCGTAAAGACTCTGACAGGCAAAACGATCACCGTCGACGTTGAACCGTCC 31252
|||||||| ||||| ||||| ||||| |||||||||||||| |||| ||||| ||||
Sbjct 451687 ATGCAAATCTTCGTCAAGACCCTGACCGGCAAAACGATCACGCTCGAGGTTGAGTCGTCG 451746
Query 31253 GACAGTGTCGAAACGGTCAAACAGAGAATAGCGGACAAGGAAGGCGTGCCGCCCGACCAG 31312
|||| |||| | || || | || ||||||||| ||| | || || ||||||
Sbjct 451747 GACACGATCGACAACGTGAAGGCCAAGATCCAGGACAAGGAGGGCATCCCCCCAGACCAG 451806
Query 31313 CAGCGTCTAATATTCGCTGGCAAACAGTTGGAAGA 31347
||||| | || ||||||||||| ||| | || ||
Sbjct 451807 CAGCGATTGATCTTCGCTGGCAAGCAGCTCGAGGA 451841
Score = 104 bits (114), Expect = 2e-17
Identities = 116/155 (75%), Gaps = 0/155 (0%)
Strand=Plus/Plus
Query 31193 ATGCAAATTTTCGTAAAGACTCTGACAGGCAAAACGATCACCGTCGACGTTGAACCGTCC 31252
|||||||| ||||| ||||| ||||| |||||||||||||| |||| ||||| ||||
Sbjct 452143 ATGCAAATCTTCGTCAAGACCCTGACCGGCAAAACGATCACGCTCGAGGTTGAGTCGTCG 452202
Query 31253 GACAGTGTCGAAACGGTCAAACAGAGAATAGCGGACAAGGAAGGCGTGCCGCCCGACCAG 31312
|||| |||| | || || | || ||||||||| ||| | || || ||||||
Sbjct 452203 GACACGATCGACAACGTGAAGGCCAAGATCCAGGACAAGGAGGGCATCCCCCCAGACCAG 452262
Query 31313 CAGCGTCTAATATTCGCTGGCAAACAGTTGGAAGA 31347
||||| | || ||||||||||| ||| | || ||
Sbjct 452263 CAGCGATTGATCTTCGCTGGCAAGCAGCTCGAGGA 452297
Score = 104 bits (114), Expect = 2e-17
Identities = 116/155 (75%), Gaps = 0/155 (0%)
Strand=Plus/Plus
Query 31193 ATGCAAATTTTCGTAAAGACTCTGACAGGCAAAACGATCACCGTCGACGTTGAACCGTCC 31252
|||||||| ||||| ||||| ||||| |||||||||||||| |||| || || ||||
Sbjct 678891 ATGCAAATCTTCGTCAAGACCCTGACCGGCAAAACGATCACGCTCGAGGTCGAGTCGTCG 678950
Query 31253 GACAGTGTCGAAACGGTCAAACAGAGAATAGCGGACAAGGAAGGCGTGCCGCCCGACCAG 31312
|||| |||| | ||||| | || ||||||||| ||| | || || ||||||
Sbjct 678951 GACACGATCGACAACGTCAAGGCCAAGATCCAGGACAAGGAGGGCATTCCTCCAGACCAG 679010
Query 31313 CAGCGTCTAATATTCGCTGGCAAACAGTTGGAAGA 31347
||||| | || ||||||||||| ||| | || ||
Sbjct 679011 CAGCGATTGATCTTCGCTGGCAAGCAGCTCGAGGA 679045
Score = 100 bits (110), Expect = 3e-16
Identities = 116/155 (75%), Gaps = 1/155 (1%)
Strand=Plus/Plus
Query 31193 ATGCAAATTTTCGTAAAGACTCTGACAGGCAAAACGATCACCGTCGACGTTGAACCGTCC 31252
|||||||| ||||| ||||| ||||| |||||||||||||| |||| ||||| ||||
Sbjct 452371 ATGCAAATCTTCGTCAAGACCCTGACCGGCAAAACGATCACGCTCGAGGTTGAGTCGTCG 452430
Query 31253 GACAGTGTCGAAACGGTCAAACAGAGAATAGCGGACAAGGAAGGCGTGCCGCCCGACCAG 31312
|||| |||| | || || | || ||||||||| ||| | || || ||||||
Sbjct 452431 GACACGATCGACAACGTGAAGGCCAAGATCCAGGACAAGGAGGGCAT-CCCCCAGACCAG 452489
Query 31313 CAGCGTCTAATATTCGCTGGCAAACAGTTGGAAGA 31347
||||| | || ||||||||||| ||| | || ||
Sbjct 452490 CAGCGATTGATCTTCGCTGGCAAGCAGCTCGAGGA 452524
Score = 100 bits (110), Expect = 3e-16
Identities = 115/155 (74%), Gaps = 0/155 (0%)
Strand=Plus/Plus
Query 31193 ATGCAAATTTTCGTAAAGACTCTGACAGGCAAAACGATCACCGTCGACGTTGAACCGTCC 31252
|||||||| ||||| ||||| ||||| ||||| |||||||| |||| || || ||||
Sbjct 678663 ATGCAAATCTTCGTCAAGACCCTGACTGGCAAGACGATCACGCTCGAGGTCGAGTCGTCG 678722
Query 31253 GACAGTGTCGAAACGGTCAAACAGAGAATAGCGGACAAGGAAGGCGTGCCGCCCGACCAG 31312
|||| |||| | ||||| | || ||||||||| ||| | || || ||||||
Sbjct 678723 GACACGATCGACAACGTCAAGGCCAAGATCCAGGACAAGGAGGGCATCCCTCCAGACCAG 678782
Query 31313 CAGCGTCTAATATTCGCTGGCAAACAGTTGGAAGA 31347
||||| | || ||||||||||| ||| | || ||
Sbjct 678783 CAGCGATTGATCTTCGCTGGCAAGCAGCTCGAGGA 678817
Score = 100 bits (110), Expect = 3e-16
Identities = 115/155 (74%), Gaps = 0/155 (0%)
Strand=Plus/Plus
Query 31193 ATGCAAATTTTCGTAAAGACTCTGACAGGCAAAACGATCACCGTCGACGTTGAACCGTCC 31252
|||||||| || || ||||| ||||| |||||||||||||| |||| || || ||||
Sbjct 679119 ATGCAAATCTTTGTCAAGACCCTGACCGGCAAAACGATCACGCTCGAGGTCGAGTCGTCG 679178
Query 31253 GACAGTGTCGAAACGGTCAAACAGAGAATAGCGGACAAGGAAGGCGTGCCGCCCGACCAG 31312
|||| |||| | ||||| | || ||||||||| ||| | || || ||||||
Sbjct 679179 GACACGATCGACAACGTCAAGGCCAAGATTCAGGACAAGGAGGGCATCCCTCCAGACCAG 679238
Query 31313 CAGCGTCTAATATTCGCTGGCAAACAGTTGGAAGA 31347
||||| | || ||||||||||| ||| | || ||
Sbjct 679239 CAGCGATTGATCTTCGCTGGCAAGCAGCTCGAGGA 679273
Score = 95.1 bits (104), Expect = 1e-14
Identities = 114/155 (74%), Gaps = 0/155 (0%)
Strand=Plus/Plus
Query 31193 ATGCAAATTTTCGTAAAGACTCTGACAGGCAAAACGATCACCGTCGACGTTGAACCGTCC 31252
|||||||| || || ||||| ||||| || ||||||||||| |||| || || ||||
Sbjct 451915 ATGCAAATCTTTGTCAAGACCCTGACCGGTAAAACGATCACGCTCGAGGTCGAGTCGTCG 451974
Query 31253 GACAGTGTCGAAACGGTCAAACAGAGAATAGCGGACAAGGAAGGCGTGCCGCCCGACCAG 31312
|||| |||| | ||||| | || ||||||||| ||| | || || ||||||
Sbjct 451975 GACACGATCGACAACGTCAAGGCCAAGATTCAGGACAAGGAGGGCATCCCCCCAGACCAG 452034
Query 31313 CAGCGTCTAATATTCGCTGGCAAACAGTTGGAAGA 31347
||||| | || ||||||||||| ||| | || ||
Sbjct 452035 CAGCGATTGATCTTCGCTGGCAAGCAGCTCGAGGA 452069
Score = 95.1 bits (104), Expect = 1e-14
Identities = 114/155 (74%), Gaps = 0/155 (0%)
Strand=Plus/Plus
Query 31193 ATGCAAATTTTCGTAAAGACTCTGACAGGCAAAACGATCACCGTCGACGTTGAACCGTCC 31252
|||||||| || || ||||| ||||| || ||||||||||| |||| || || ||||
Sbjct 452598 ATGCAAATCTTTGTCAAGACCCTGACCGGTAAAACGATCACGCTCGAGGTCGAGTCGTCG 452657
Query 31253 GACAGTGTCGAAACGGTCAAACAGAGAATAGCGGACAAGGAAGGCGTGCCGCCCGACCAG 31312
|||| |||| | ||||| | || ||||||||| ||| | || || ||||||
Sbjct 452658 GACACGATCGACAACGTCAAGGCCAAGATTCAGGACAAGGAGGGCATCCCCCCAGACCAG 452717
Query 31313 CAGCGTCTAATATTCGCTGGCAAACAGTTGGAAGA 31347
||||| | || ||||||||||| ||| | || ||
Sbjct 452718 CAGCGATTGATCTTCGCTGGCAAGCAGCTCGAGGA 452752
>seq21
Length=1587489
Score = 95.1 bits (104), Expect = 1e-14
Identities = 164/238 (69%), Gaps = 4/238 (2%)
Strand=Plus/Minus
Query 31194 TGCAAATTTTCGTAAAGACTCTGACAGGCAAAACGATCACCGTCGACGTTGAACCGTCCG 31253
||||||| ||||| ||||| || || ||||| || |||||| |||| || || | ||||
Sbjct 1354364 TGCAAATCTTCGTCAAGACCCTTACGGGCAAGACCATCACCCTCGAGGTCGAGTCCTCCG 1354305
Query 31254 ACAGTGTCGAAACGGTCAAACAGAGAATAGCGGACAAGGAAGGCGTGCCGCCCGACCAGC 31313
||| |||| | ||||| | || ||||||||||| | || || |||||||
Sbjct 1354304 ACACGATCGACAACGTCAAGGCCAAGATCCAAGACAAGGAAGGAATTCCCCCAGACCAGC 1354245
Query 31314 AGCGTCTAATATTCGCTGGCAAACAGTTGGAAGACTCTATGACTATGAGCGATTATAACA 31373
| ||||| || ||||| ||||| ||| | || || ||| | || || ||||
Sbjct 1354244 AACGTCTCATCTTCGCCGGCAAGCAGCTCGAGGATGGCCGTACTCTCGCGGACTACAACA 1354185
Query 31374 TTCAAAAAGAATCGACTCTTCATCTGGTACTTAGACTGAGGGGCGGT----AGAAGCG 31427
| ||||| || ||||| || || |||| || | ||| | || ||| |||||||
Sbjct 1354184 TCCAAAAGGAGTCGACCCTCCACTTGGTGCTCCGCCTGCGCGGTGGTGCCAAGAAGCG 1354127
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 445765714634160
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |