Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Microbotryum_20violaceum_20[genbank_20GCA_5F900008855.1_202016-12- 23] 123 sequences; 24,532,870 total letters Query= NC_003310.1 Length=196858 Score E Sequences producing significant alignments: (Bits) Value seq36 91.5 2e-13 >seq36 Length=1210608 Score = 91.5 bits (100), Expect = 2e-13 Identities = 415/647 (64%), Gaps = 16/647 (2%) Strand=Plus/Minus Query 63248 CCACTCTCCGTCATCCTTCACTCGTTTCATAAAGAGATCAGGAATCCAAAGAGCTATAAA 63307 |||||| ||| | ||| || || | ||| || ||||| || ||||| || || | || Sbjct 5279 CCACTCGCCGGCGGCCTCGACACGCTCCATGAACAGATCGGGGATCCAGAGCGCAAAGAA 5220 Query 63308 TAGATCTCTTGTTCTATGTTCCTCGTTTCCTGTATTCTTTTTAAGATCGAGGAACGCCAT 63367 ||||| | | | ||| || || || |||||| ||| || |||||| | | Sbjct 5219 GAGATCACGAGCGCGGACTTCTTCCTTGCCGTGATTCTTGCGAAGGTCCAGGAACTCGAA 5160 Query 63368 AATATCAGAATGCCACGGTTCCAAGTATATGGCCATAACTCCAGGCCGTTTGTTTCCTCC 63427 | || | |||||||| || | ||| || || | |||| || || ||||| || || Sbjct 5159 GACGTCGGCGTGCCACGGCTCGAGGTAGATCGCGAAGGCTCCGGGACGCTTGTTGCCACC 5100 Query 63428 CTGATCTATGTATCTAGCGGTGTTATTATAAACTCTCAACATTGGAATAATACCGTTTGA 63487 || || | ||| | |||||||| || || || | || ||| || | || || || || Sbjct 5099 TTGGTCGACGTAGCGCGCGGTGTTGTTGTAGACGCGCAGCATGGGGACGATGCCATTCGA 5040 Query 63488 TATACCATTGGTACCGGAGATATAGCCTCCACTGGCACGAATATTACTAATTGATAGACC 63547 || || || |||| ||| ||| || | || || || || || || ||| Sbjct 5039 GTAGCCGTTCGTGCCGGCGATGTAGGAGCCGGTCGCGCGGATGTTGTGGATGCTTAAACC 4980 Query 63548 TATTCCCCCTGCCATTTTAGAGATTAATGCGCATCGTTTTAA-CGTGTCATAGATGCCTT 63606 || || || || | || ||||| | ||||| ||| || | |||||| |||||||||| Sbjct 4979 GATACCACCGGCGGTCTTGGAGATGAGCGCGCA-CGTCTTGAGCGTGTCGTAGATGCCTT 4921 Query 63607 CTATGCTATCATCGATCAT-GTTAAGTAGAA-AACAGCTAGA-CATTTGGTGACGAGTAG 63663 | || || || |||| || | |||| || | ||| | ||||| | ||| Sbjct 4920 CAATCGAGTCGTCCTTCATCGTGACCAAGAAGCACGACGAGAGCTGCGGGTGAGGGGTA- 4862 Query 63664 TTCCCGCATTAAATAAGGTAGGAGAAGCGTGCGTAAACCATTTTTCAGAAAGTAGATTGT 63723 || ||||| || | || || || ||||| || || | || || | || |||| Sbjct 4861 --CCGGCATTGAAGAGCGTCGGCGAGGCGTGGGTGAAGTAGCGCTCGGACATGAGGTTGT 4804 Query 63724 ACGTCT-CAATAGCTGAGTCTATATCCCATTGA---TGAATTCCTACTGCGACACGCATT 63779 | | || ||| | | || || || ||| || || || || ||||||||||| Sbjct 4803 AGGACTGCAAGA-CGCGCTCGATGTC---GTGACCGTGGATGCCGACGGCGACACGCATG 4748 Query 63780 AACATGTGCTGAGGTCTTTCAACAATTTTGTTGTTTATTTTCAACAAGTAGGATTTTTCC 63839 | ||||||||| || | ||| | | ||| || || | ||||||||| || Sbjct 4747 AGCATGTGCTGCGGACGTTCGGCGACCTTGCCGTCGATGCGAAGCAAGTAGGAGCGCTCG 4688 Query 63840 AAAGTTTTAAAACCAAAATAGTTGTATGAAAAGTCTCGTTCGTAAAT 63886 | || || || |||||||||||||| || || || ||||| || Sbjct 4687 AGTGTCTTGAAGCCAAAATAGTTGTAGCCGAAATCGCGGTCGTAGAT 4641 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 629816631655440